Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->HSFB2a(2)                                                 <---------HSFB2a(2) ------>MYB83                                            <---------ICU4           ------>MYB46(1)                   --------->ANAC46         -------->HAHB4         --------->AtMYB61                   --------->ANAC58         <--------ATHB1        --------->MYB46(3)                   --------->ANAC58         --------->ATHB12     --------->ANAC58                 <---------ALFIN1          <---------YAB1        --------->ANAC58                 --------->ANAC46          <---------ATHB12  --------->AtLEC2  <-----------GT1               <---------ALFIN1            --------->ICU4<---------YAB1       <-----------GT1 --GT1        <---------REM1(2)  ---------->DOF2 <---------HSFC1(1)------->GAMYB              -------   cttgagtaaatctatctacacactccatccaattcgaaagagctaatgattcgagaaatatcaatgcaaccaaatcaaatttaacctattgaaacgaatt  18513900                                                                                         ---------->DOF2                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                         --------->LBD16  --------->ALFIN1     ---------->DOF2                                        <---------HSFB2a(2)                 --------->At5g28300  ---- >TEIL    <----------DOF2               --------->HSFB2a(2)        ---------->DOF2  ---------->DOF2   tgaaatcaaacgctttaaaaacacacactaattcaacaaaatccagaagaaatcgtcgcgatggggaatcaaagaggcagtgaaagcaaaggaaagagag  18514000                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                --------->LBD16                                                                               <---------LBD16                                                                       --------->WRKY38(1)                                                                      --------->DOF5.7(2)                                                                    <---------ANAC46             <---                                                         <---------ARR14(2)    <---------HSFB2a(2)                                                     <---------HSFB2a(2)       --------->HSFB2a(2)  <              --------->AtLEC2                       --------->HSFB2a(2)      <---------ANAC46------>NtERF2            <---------At4g35610                   --------->GLK1(2) <---------ANAC58      <---------DEAR3(1)           --------->ARR14(2)          <-----------RAV1(1)   ---------->DOF2  <---------LBD16--------           <---------ARR14(2)--------->ZAT6   <---------RAP2.6(3)   <---------ANAC58    <-----------HVH21 ------>DOF2--------->At4g35610        --------->ALFIN1  --------->ARR14(2)  <---------LBD16<------NtERF2   aaaggagcaaggggacctgcaaaacgctgttacagtagcaagtgttgccgaaattctcgaatccaaagtagcgttcaccttcggggaactggtcgccgag  18514100                         <------NtERF2                        <---------ZAT18                        ------>NtERF2                        --------->PCF2                       --------->DEAR3(1)                       <---------PCF2                      --------->ORA47(2)                      --------->RAP2.3(1)                      --------->ATERF1(1)                      ------>NtERF2                      <------NtERF2                      --------->DEAR4(2)                     --------->DEAR3(1)                     <---------ORA47(2)                     <---------DEAR4(2)                     <---------ATERF1(1)                     ------>NtERF2                     <---------RAP2.3(1)                    <---------DEAR3(1)                <-----------GT1              --------->GLK1(2)                    --------->ANAC46               <---------CCA1(2)              --------->ARR14(2)                   <---------LBD16               <---------ANAC55(2)              <---------GLK1(2)                   --------->LBD16               <---------ANAC58                 <---------ARR14(2)                   --------->At4g35610           <---------ANAC58                --------->HSFB2a(1)                   <------NtERF2                 <---------ANAC55(1)             --------->GLK1(1)                   --------->ATERF1(1)           --------->ANAC55(2)    ------>ZmHOX2a(1)                   <---------At4g35610           <---------ANAC46     ----------->RAV1(2)     -------                  <---------ATERF1(1)        <---------ANAC58         ------>ZmHOX2a(2)   ---------->DOF2    --------->HSFB2a(2)--------->RAP2.3(2)   <---------ANAC58  <-----------GT1  ----------->ARR10 --- ------ARR11(3)  <---------LBD16       <<<<<<<ZML2--------->LBD16     =============================== ----------DOF2 --------->ATERF1(1) <---------HSFB2a(2)    <---------MYB52(1)  <---------------------WRI1 ->DEAR3(1)    --------->PCF2       --------->HSFB2a(2)<---------At5g28300  <---------LBD16   <------   agctttctcgagtttggagcccgcggcgcccattagccctagaactagcttccgtatcaccgttttttctgatcctgactcggagattctctcaaaggtc  18514200                                                                                            <--------                                                      ------->TEIL                        <----------                                                    ------->GAMYB                      <---------YAB1                                            <---------GLK1(1)                        --------->AHL20(2) -->ARR11(3)                                --------->GLK1(1)                    ------>ZmHOX2a(2) --->ZmHOX2a(1)   <------MYB46(1)          <---------GLK1(2)                   <---------ARR14(2) ====HOX2a_HOX2a  <---------MYB46(3)       --------->ARR14(2)                  --------->ARR14(2) ---ARR11(3)      <------MYB83 ------>ZmHOX2a(2)   --------->MYB46(3)         <------ZmHOX2a(1)   <--   ctcttcttagcctctgcgattggttcgattcgatcggagaattcagatttccaacgagcctcagagaagagaagagaagaggatcgattattttactatt  18514300                                   --------->MYB52(1)                                *TSS <----------DOF2                --------->ANAC58    <---------ARR14(2) <---------DAG2                 --------->ANAC58    --------->ARR14(2) -YAB1                    <----------ID1      --------->ARR11(3)                  <------------CBF -GT1       <----------DOF2 <---------------------WRI1        --------->YAB1     <---------ICU4    -- ---------GT1         ---------->DOF2<---------MYB52(2)      <---------YAB1     --------->ICU4   ----   aaactttttctcttcttttctgtccaaagcgacgaagcaacgaaggaagatgtggatttgattatcaaaaactatttgagtcaaaattgcaacttactcc  18514400                                                                 --------->ANAC58                                                                 --------->bZIP60(2)                                                                 --------->ANAC46                                                                 --------->ANAC58                                                            >>>>>>>>>MYB98                                                           --------->MYB52(1)                                                           ------>MYB83                                                           ------>MYB46(1)                                                          --------->MYB55(1)                                                         <---------MYB111(1)                                                         <---------MYB59                                                         <---------MYB52(2)                 --------->ANAC46                        <---------MYB46(2)                   <------             <----------DOF2                            --------->ANAC46        <---------ARR14(2)             <---------DAG2 <----------DOF2             --------->ANAC55(2)     <---------GLK1(2) ------------->AGL15     <-----------GT1              <-----------GT1           --------->ARR14(2) -->ZmHOX2a(1) <-----------GT1                   <---------AHL20(2)   --------->AtLEC2     <---------   tccaaattttgtaaactttacgacatttaacttttagtttttgaaacttattttatatacctaacccaagtcatgcattgcaaattctctgattcacctt  18514500     <----------DOF2   ---------->ID1                                                          <---------ZAT18       ---- ---DAG2             --------->TOE2(3)                 --------->TOE2(3)   --------->ZAT18       <--- --GT1   <---------YAB1                       ----------->RAV1(1)    <-----------RAV1(1)     --------   acttcgtctttttgatagtttaaacttaatacatactcttgacaacaacaacaaaaaacttaatacatactatgttgtgcccaaaaacaaaaacaaaaag  18514600                                                        <---------YAB1                                                       <---------ARR11(3)                                                       <-----------GT1                 <---------AHL20(2)                                                   <---------ICU4                     --------->YAB1                                                 <---------AHL20(2)               --------->AHL20(2)             <---------AHL20(2)                 --------->YAB1                  --------->TOE2(3)             --------->AHL20(2)                <---------YAB1      ------>ZmHOX2a(1)  --------->AHL20(2)             --------->AHL20(1)              --------->YAB1 <-----------GT1   <-----------GT1    <--- ----->ARR11(3)                   --------->AHL20(2)   --------->ARR11(3) <---------AHL20(2)    ----- ------ARR11(3)       --------->AHL20(2)    <---------YAB1<----------DOF2--------->AHL20(2)---------- -->DOF2    --------->AHL20(2) <---------ANAC55(2)--------->ICU4  --------->TOE2(3)   <---------AHL20(2)   aacttattctaaaaaaaaattagttttaatatcacataaatttcatattataaaaattatctttacatcctaaaattttataacttaattatatggtata  18514700                   <---------YAB1                   <---------TOE2(3)                 --------->AHL20(2)             <---------AHL20(2)         <---------ICU4     <-----------GT1                    <--------HAHB4          ---------->DOF2   <---------AHL20(2)   <---------AHL20(2)                   --------->YAB1      <---------ANAC55(2)  <---------AHL20(2)  --------->AHL20(2)             <---------ZAT14       <-----------GT1           --------->YAB1 ------AHL20(2)  <---------AHL20(2)    <---------YAB1<---------AHL20(2)      --------->AHL20(2)  <--- ---->YAB1   --------->AHL20(2)  --------->ZAT14   <---------YAB1          --------->TOE2(3)    ----- ->GT1 --------->ZAT6    <---------ANAC55(2)  <----------DOF2--------->TOE2(3)   --------->AHL20(2)<-   aaaattttatctctattaattaatattacatatagtgaagtatcattacttttatttttatcacctaaaaggccataacttaattatatggtatgaaatt  18514800  Previous    Next  AGI:  At4g39910.1    Description:  ATUBP3 (UBIQUITIN-SPECIFIC PROTEASE 3); ubiquitin-specific protease. Identical to Ubiquitin carboxyl-terminal hydrolase 3 (UBP3) [Arabidopsis Thaliana] (GB:O24454); similar to ATUBP4 (UBIQUITIN-SPECIFIC PROTEASE 4), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT2G22310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67091.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43342.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) Range:  from: 18511569    to: 18514332    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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