Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ------>ZmHOX2a(1)                                              <---------------AGL15       --------->TOE2(3)                                              ------>ZmHOX2a(1)   --------->ATHB12                                              =======================================================                                              --------------->AGL15  <-------TEIL                                             --------->TOE2(3)   --------->ICU4                                   ----------->GT1               <---------YAB1    ----------->HVH21       ==================================MADS_MADS   --------->TOE1(2)         < --------->DOF2             --------------->AGL15              --------->YAB1             -----------   aagaaagtgacgactagactaaaacagtgtccaagattagtaaaattcctaaaaatagtcttctctcatgattcatcctaagaaatgaaatggccaaatg  18510100                                                                                             <-------TEIL                                                                                            ---------                                                                                            ---------                               <---------HSFC1(2)                                          --------->ARR11(1)             <---------------AGL15      --------->GLK1(2)                                  --------->ARR14(2)             --------------->AGL15   --------->LBD16                                       <---------ARR14(2)          ------->TEIL         --------->HSFC1(2)                            ----------------->AGL1   --------->ATHB12         ---------->DOF2        --------->O2          --------->KAN4(2)--------->HSFB2a(1)  <---------YAB1    ----------->GT1 <---------HSFB2a(2)                 <---------ICU4    --------->HSFC1(2) =============================MADS_MADS<---------GLK1(2)               <---------YAB1     <---------HSFC1(2) ------ZmHOX2a(1)  <---------ZAT6   --------->HSFB2a(2)                --------->ICU4     <---------HSFB2a(1) ------>AGL1<-----------------AGL3  --------->HSFC1(1)              <---------YAB1       ----------->ARR10   caggatgatttgaatctattagtggaaaataaaagcttccagaatcgaaccccaagtctctcatcttcttctcattattcccaaatcgaagaagattcga  18510200                                                                                          --------->GLK1(2)                                                                                          <---------ARR14(2)                                                           --------->TOE2(3)     <---------ZAT14    -       --------->LBD16                                   -------->P              --------->ZAT14   --   <---------ARR14(2)                                   --------->MYB52(1)   <---------ICU4        --   --------->ARR14(2)       ----------->RAV1(1)         <-----------GT1      --------->ATHB12     --- >CCA1(2)                  --------->MYB46(3)         <---------MYB52(2)    <---------ATHB12      --- >ARR14(1)       ----------->GT1                    ------->TEIL      <---------GLK1(1)  <---------GLK1(2)   ttccaaatccccaaatcgattgtgaaacaacaacagtagagggaagaagtaatgaaactaacctcatcgaagaaatcactcattgcagagagaatcgtga  18510300           ---------->DOF2          <------ZmHOX2a(1)                                                     --------------->AtSPL3  <---------ATHB12                                                              --------------->AtSPL8 ------>MYB46(1)                               --------->LBD16                  <---------------AtSPL3 ------>MYB83                       <------ZmHOX2a(1)                      <---------REM1(1) -------->MYB52(1)            ---------->DOF2 --------->ANAC58          <-----------RAV1(1) ------->TOE2(2)           --------------->AGL15                        <---------ZAT6             -- ------->TOE1(2)           <---------------AGL15                    <---------ZAT14              ---- ------>DEAR3(2)        --------->GLK1(2)     --------->ANAC58   <---------ANAC46               <---- ------>MYB46(3)       <---------GLK1(2)     <---------LBD16    ---------->ID1  <---------------AtSPL8   accaacgatggaggaaagaagaagcgattctcaaaagaggaagaagacgcggaagcttgaagactcgtcgtatagtgttgtagttgtacaacaacaatgc  18510400                                       --------->At4g35610                                    <------NtERF2                                   ------>NtERF2                                  <---------ATERF1(2)                                  --------->bZIP60(1)                                  <---------bZIP60(1)                                  --------->ATERF1(2)                                  <---------RAP2.6(2)                                 --------->RAP2.6(3)                                --------->MYB52(1)                               ----------->TGA1                               ----------->HVH21                              <-----------HVH21                             <---------O2                             --------->O2                             --------->ANAC46                            --------->LBD16                           <---------ANAC58                           <---------ANAC46                           <---------ANAC58                          <---------LBD16                      --------->HSFC1(2)<---------ARR14(2)                      --------->HSFB2a(1)                      <---------HSFC1(2)--------->ARR14(2)    >>>>>>>>>TBF1 ------->REM1(2)      --------->At4g35610          --------->DAG2      ---------->DOF2 --->TEIL             <---------At4g35610         ---------->DOF2 ----------->GT1 -----AtLEC2          <---------HSFB2a(1) <-------TEIL     >>>>>>>>>TBF1   atgtagagagtgttttgaatcggaagcttccgcgtgacggcagattcagagagaaagtgaagaagaagaagtaaaaagagagagagagagagagagagag  18510500                                                                                             <-------                                                                                            ---------                                                                                     ------>ZmHOX2a(1)                                                                              <---------ANAC58      -                                                                              <---------ANAC58      <                                                                        ----------->HVH21  <---------YAB1                                                                       <-----------HVH21 <---------At4g35610                                                                    ----------->RAV1(2)  --------->At4g35610                                               *TSS <------ZmHOX2a(1) ------>ZmHOX2a(1)--------->REM1(1)                                              --------->CCA1(2)<------------------------ANAC81<------   agagagagagagagagagagagagagagagagagagagagagagagagagatgaggaagacgctctcttctcctgtgatggcttctccttcatctgattg  18510600                <---------DOF5.7(2)           --------->LBD16                                  -------->P          --------->ANAC46  ------>ZmHOX2a(1)           ------>MYB83  <---------DAG2          --------->ANAC55(2)                           <-----------ARR10  ------------>CBF          <---------YAB1              ------>MYB46(1)                             < -----CBF<---------LBD16   --------->TOE2(3)           --------->WOX13(1)                  --------->YAB1 >ATHB12<-----------GT1 --------->ARR14(2)         <-----------GT1    <----------DOF2     <------ZmHOX2a(2) -------->REM1(1) <----------ID1               --------->AHL20(2)  <-----------GT1    --------->HSFB2a(2) ---------bZIP60(1)     <---------ARR14(2)  --------->TOE2(3)   <----------DOF2       ------>ZmHOX2a(1) ---WOX13(1)    --------->MYB52(1)       ------>ZmHOX2a(1) <-----------GT1      <-----------GT1 <----   cgacatcaattcacgggataacgacaaatcctcattcttcgtcctcccttaaattaccaatctacccttttactttttctattatctcctcgatcatgtt  18510700                                              <---------------AGL15                                              --------------->AGL15                                             ----------------->AGL3                                             <-----------------AGL2                                             <-----------------AGL1                                             <-----------------AGL3                                          <---------YAB1                                        -------->ATHB1                                        --------->ATHB51                                        -------->HAHB4                                       <---------YAB1                                       <---------ATHB51                                       --------->ICU4                                    <---------AHL20(2)                                    --------->AHL20(2)                <---------ICU4            -----                                --------->AHL20(2)                 --------->YAB1              <-----          --------->ATHB12      <---------AHL20(2)           <---------ICU4                    <-----   --------->AHL20(2)        <---------ICU4<-----------GT1   --------->YAB1                    <-----   <---------AHL20(2)     --------->YAB1<---------ICU4      <---------YAB1                    <------ ---------ICU4         --------->GLK1(1)<--------HAHB4    --------->YAB1                 --------->AHL20(2) -------GT1            <---------GLK1(1)--------->YAB1   <------ZmHOX2a(2)               <---------AHL20(2)   actaattaaacttgattagttagggatttcataattttttaattattactacatatgggatcatcatcaacataatgacatttactgacaaataaatgca  18510800                                                    <-----------GT1                                                   --------->AHL20(2)                                               <---------YAB1                                          <---------ICU4                                          <--------HAHB4                                          --------->ATHB51                   <---------DAG2                                         --------->ICU4                      <----------DOF2 -->TEIL                    --------->ZAT14  --------->YAB1                 <---------DAG2 ----AtLEC2 <---------At4g35610          <---------YAB1              <---------ETT(2) ----ANAC58 --------->At4g35610        --------->YAB1           --------->At4g35610               --- ----ANAC58<-----------RAV1(1)      --------->WOX13(1)          <---------At4g35610    <---------ZAT18 -TEIL <---------GLK1(1)    <---------ZAT14  <-----------GT1    --------->ZAT2         --------->ZAT18   tgtctgtagatttctgctgtttgatactactatactatcagtcataattacaatttactatttatgagctgtctactacctttttgtaatgcacaaaaac  18510900                        <------ZmHOX2a(1)            <---------AHL20(1)            <---------AHL20(2)           ----------->GT1    ------->GAMYB                      ------            --------->AHL20(2)        <XXXXXXXXXXXXXXXXXXXXMIR835-5P --------->AHL20(2)       <------        <---------AHL20(2)          <---------YAB1         --------->MYB46(3)             <----------DOF2       <---------AHL20(2)         --------->YAB1          --------->At4g35610       ------->TEIL ------>ANAC46 <---------YAB1    <---------YAB1          --------->MYB52(1)      --------->AtLEC2<---   acatcattttttattttatttttggaggaaacaatatgataaatggtatatacaagaatcaacagaccatataaaatccacccatgcacttccttttttc  18511000  Previous    Next  AGI:  At4g39900.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO67041.1) Range:  from: 18508364    to: 18510547    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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