Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------AHL20(2)                           --------->YAB1                           ----------->GT1                          <---------YAB1                       --------->TOE1(2)     <-----------GT1                <-------TEIL  --------->AHL20(2)             --------->At4g35610     <----------ID1          --------->YAB1                         <             <---------At4g35610   ----------->GT1 --------->TOE2(3)                      <---------ARR11(3)         <---------ANAC46<---------TOE2(2)   <---------ICU4 <---------ATHB12              --------->ARR11(3) <------ZmHOX2a(2)     --------->TOE2(2)    <---------ATHB12--------->AHL20(2)            <----------   tcgatcacattacgcagatgcaaaacgtatgataaaattgtgacaaatcactacattagccaataaatatagtcatctctgatcatcccaaaaatctcat  18505600                                            <---------ICU4                                            --------->ATHB51                                            <--------ATHB1                                            -------->HAHB4                                           <---------AHL20(2)                                           <---------YAB1                                           <---------ATHB51                                           --------->ICU4                                           --------->AHL20(2)                                          <---------AHL20(1)                                         --------->YAB1                                       --------->AHL20(2)                                <---------ICU4                  <------MYB83  <--------ATHB1                  <------MYB46(1)  ----------->GT1                   --------->YAB1               <---------ANAC46 -------->HAHB4            <---------ARR14(2)     --------->ZAT18            --------->ATHB51          --------->ARR11(3)     <---------ZAT18           <---------AHL20(2)         <---------GLK1(2) ----------DOF2<---------ANAC58--------->AHL20(2)  --------->MYB52(2)<---------ICU4 -ARR10        <---------ANAC58<---------ATHB51  <---------MYB52(1) --------->ICU4   cactttgtggactagtagcttggtgtttactaaataattgttaaaataattgttagttcagattttggtattcattacagattacaactaggctactact  18505700                                                                       --------->AHL20(2)                                                                    --------->WOX13(1)                  --------->MYB52(1)         <----------DOF2       <---------AHL20(2)                <---------MYB52(2)        <---------ARR11(3)       --------->AHL20(2)     <---------ARR14(2)                   --------->ARR11(3)   <---------AHL20(2)     --------->ARR14(2)               ---------->DOF2          --------->AHL20(2)  <---------AHL20(2)     <-----------ARR10              <----------DOF2            <---------YAB1<---------TOE2(3)     <---------ARR11(3)            <---------ANAC46      <---------TOE2(3)  --------->MYB52(1)     --------->ARR11(3)            <---------ANAC58      <---------TOE1(3)  <-----------GT1    <---------CCA1(2)              <---------ANAC58      --------->MYB59  <---------MYB52(2) <-------   cacctagtatcttcacaaactaacaaaaatttgtttggcttaaaggtctttttttggtttaggttttaattaatcaaataacgatttaaaagattaatga  18505800                                                                             --------->RAP2.6(2)                                                                             ------->GAMYB                                                                            --------->MYB46(3)                                                                           -------->P                                                                           ------>MYB46(1)                                               <---------AHL20(2)          ------>MYB83                                            <---------AHL20(1)            --------->MYB52(1)                                       --------->AHL20(2)                 ------>MYB83                                      --------->AHL20(2)                  ------>MYB46(1)                                     <---------YAB1                     --------->MYB46(3)                                    --------->TOE2(3)                   <---------MYB55(2)                                   --------->ATHB12                    --------->ANAC58                                   <---------ICU4   <---------AHL20(2) --------->ANAC58                                   <--------HAHB4 <---------YAB1       --------->ANAC46            --                                  <---------YAB1 <---------AHL20(1) <-------TEIL  --------->DEAR3(1)         <---------YAB1           --------->ICU4 <---------AHL20(2)--------->CCA1(2)              <--       --------->YAB1           --------->YAB1 <---------YAB1     <---------ARR14(2)            ----- --TOE2(3)--------->YAB1       <-------TEIL --------->AHL20(1)    --------->ARR14(2)  ------>NtERF2==   agaagactttgatcatagaaattttagaaaacattcatcattaaaaaatattattttttttaaacacagatacacccaaccgcatcgacgcgcttcttat  18505900                                       <------NtERF2                                     --------->ALFIN1                                    <-------MYC3                                    ------->MYC3                                    ------->MYC2                                    <-------MYC2                                    <-------PIF5                                    ------->PIF5                                   <---------TGA1a                                   --------->ALFIN1                                   <---------ANAC46             --------->GLK1(1)     <---------ANAC58             <---------GLK1(1)     <---------ANAC58          --------->LBD16          <------NtERF2         --------->ANAC46<---------AHL20(2)        ------>NtERF2   <---------AHL20(2)        <---------At4g35610       ------>NtERF2        --------->LBD16 --------->AHL20(1)        --------->At4g35610      <---------ANAC58        <---------LBD16 <---------ARR11(3)      <---------LBD16   --------->AHL20(2)                        <---------ANAC58 -------->DOF2          --------->ARR11(3)                        <---------ANAC46                --- -------AHL20(2)        <---------AHL20(1)         <---------TOE2(3)   <---------PCF2      <---------ZAT18 ------>TBP <---------ARR14(2)   <---------ANAC58  <---------TOE1(3)  ----------->HVH21<------NtERF2 ============================================bZIP_DOF   *TSS      <---------ANAC58   <---------DEAR3(1)   ataaagtctccgcggaaatcgttgaatatatttgggcgcgtggcgattttgtgaaggttgtcaagtttgtgtgcgaccgagtcatcgtcgtcgtgctctc  18506000                                                                                              -------                                                 ------>ZmHOX2a(2)        ---------->ID1  ------->GAMYB                                               --------->ARR11(3)        <-----------GT1 --------->ANAC46                                               <---------ARR11(3)   <----------DOF2      --------->ANAC58                                           <---------At4g35610<----------DOF2            --------->ANAC58             --------->HSFB2a(2) --------->GLK1(2)            <---------DAG2           --------->MYB52(1)  <<<<<<<<<TBF1        ---------->DOF2<---------GLK1(2)      <------------------------ANAC81--------- --->ZmHOX2a(1)   --------->TOE1(2) <---------YAB1<----------DOF2 ---------->ID1 <<<<<<<<<TBF1-------   cttcttcttcatcgtcgagacctaagaaagacgagactctgattcttctgatctttgaatcacactttttctttttttccttcttcttccaacggaacgg  18506100                                                             <---------ANAC46                                                             --------->ETT(1)                                                           <-----------HVH21                   <----------DOF2                        <-----------RAV1(1)      <---------ANAC58                                 ------>MYB46(1)      <---------ANAC58     ----------->GT1             --------->GLK1(2) -->ANAC58        <---------DAG2                       ------>MYB83                     <---------ANAC46 >MYB52(1)     <-----------GT1                        --------->WOX13(1)    <---------ICU4 -->ANAC58    <-----------------AGL1            <------ZmHOX2a(1)           --------->YAB1    -------   aacatatggcttcggtttcacctttggcaaagtttaaactggtgttcttaggagaccaatctgtcggaaaaaccagcatcatcactcgtttcatgtatga  18506200                <-----------RAV1(2)               <---------TOE1(1)               <---------TOE2(1)              ------->TEIL           --------->ANAC46           --------->ANAC55(2)           --------->TOE1(1)           --------->ANAC58           <---------ANAC55(2)         <---------ALFIN1       ------>NtERF2                <----------DOF2                        ----------->RAV1(1)     <-      --------->ANAC46          --------->GLK1(2)           <---------AHL20(2)              <-------- ---->HVH21--------->ANAC58    <---------GLK1(2)            --------->AHL20(2)          <----------DOF2   caaattcgacaccacgtaccaggtatttacacagattcctttcacttgttttgtttattcatttaaattcttctctgcgacaacaagtttcttttgtttt  18506300                                                                                         <---------bZIP60(1)                                                                                         --------->bZIP60(1)                                                                                         --------->GLK1(1)                                                                                         <---------GLK1(1)                                                                                    <---------At4g35610                                                                                   <---------DEAR3(1)                                                                                <---------ANAC58                                                                                --------->ANAC46                                ------>ZmHOX2a(1)                               <---------ANAC58                         --------->ATHB51                                       --------->ANAC55(2)                         <---------ICU4                                         <---------bZIP60(2)                =======================HOX2a_HOX2a                              <---------ANAC55(2)                ------>ZmHOX2a(2)                                               --------->bZIP60(1)               <---------At4g35610         <---------MYB46(3)             <---------TOE2(2)    <---------YAB1      <---------YAB1   >>>>>>>>>ARR2                    <---------TOE1(2)    <---------AHL20(2)--------->YAB1     >>>>>>>>>ARR1                   ------>ZmHOX2a(1) --------MYB52(1)    <-------TEIL    <-----------GT1                    --------------------->WRI1 ----------------ANAC81 --------->ICU4 <---------YAB1      <---------At4g35610  <---------bZIP60(1)   cgtttttttattgtttgatctgattcattatttcctatattacgattgttcagacgatttcatctcatattggtcctagattacgtcgctgatatcactc  18506400                                                <--------P                           <------ZmHOX2a(2)                                                <---------WOX13(1)                  <---------ARR11(3)                                               <-------GAMYB                 --------->YAB1                                       <---------MYB52(1) --------->WOX13(1)<---------YAB1       ----                               --------->At4g35610      <---------YAB1    --------->YAB1         ----                               <---------At4g35610     <-----------GT1   <---------YAB1     <--------              ------->TEIL     --------->ZAT14<---------MYB46(3)      <---------YAB1--------->ARR11(3)   tggtttttcttcaatgcatttgtttgatcactctgctctctgtttttttggttgatttatcaatctcttcttcttattatgatcaagatcgatgatgcta  18506500  Previous    Next  AGI:  At4g39890.1    Description:  AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding. similar to AtRABH1d (Arabidopsis Rab GTPase homolog H1d), GTP binding [Arabidopsis thaliana] (TAIR:AT2G22290.1); similar to unknown [Picea sitchensis] (GB:ABK23720.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Rab6-related (InterPro:IPR015600); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579) Range:  from: 18505956    to: 18507580    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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