Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <<<<<<<<<MYB98                                                        <---------AHL20(2)                                                        --------->ARR11(3)                                                        <---------ARR11(3)          --------->ANAC55(2)                                                        --------->AHL20(2)    --------->AHL20(2)                                                        --------->AHL20(1)--------->AHL20(2)                                              ----------->GT1       ----------->GT1 <---------ANAC55(2) ---------DOF2                  <---------TOE1(3)       <---------AHL20(1)<---------AHL20(2) -----DOF2                      <---------TOE2(3)      --------->AHL20(2) <---------AHL20(1) >ZAT6      <----------DOF2  <---------AHL20(2)    <---------YAB1 ------->TEIL<---------AHL20(2) -GT1  --------->YAB1 --------->TOE2(3)      <---------TOE2(3)<---------TOE2(3)<-----------GT1    ---   tctttattttcatacttttattaaacttaattttaaggtttgcaaataatgttataaatatattgatgtatgttaaaaaatttatcacttaattttagac  18499300         --------->TOE2(3)         --------->YAB1         --------->TOE1(3)       --------->ARR11(3)       <---------ARR11(3)                             >>>>>>>>>RAP2.2       <-----------ARR10                 --------->AHL20(2)    ---------->DOF2   <---------AHL20(2)          --------->AHL20(2)   <---------ARR11(3)  <---------AHL20(2)      <---------AHL20(2)        --------->ARR11(3)  --------->AHL20(2)    <----------DOF2  <---------AHL20(2) ----------->GT1         --------->TOE2(3) ------>ICU4  --------->ZAT6   <---------AHL20(2)   <-----------ARR10             <-----------GT1   ataatttaaaatcttaacacttatttcttttatttaaaaacatttatatatcaatatctaaactgtaaagtttttttttgtttttaacttaaatttagat  18499400                       <---------YAB1                      <---------AHL20(1)                                                       <-----                      --------->AHL20(1)                                                    ---------                    <---------AHL20(1)                                                     --------->ARR14(2)                <---------ANAC55(2)                 <---------YAB1                         <---------GLK1(2)                --------->ANAC55(2)              --------->ICU4   ----------->GT1          <---------ARR14(2)                --------->YAB1          --------->DAG2      --------->AHL20(2)     --------->YAB1          <---------AHL20(2)           ---------->DOF2      <---------AHL20(2)   <---------WOX13(1)   aaacagttttattttcttacataatatttttgtttttaaaaaaaagttgtaagtatttttgtttaaatgtgtaaaaagaattgaatgataacagattctt  18499500                               <---------YAB1                           <----------DOF2                        <-----------GT1                   <---------AHL20(1)                   --------->AHL20(2)                  --------->AHL20(2)              ----------->GT1           <-------TEIL               <---------RVE1(1)            --------->AHL20(2)          --------->ARR14(2)   --------->ANAC46<---------AHL20(2)       <---------AHL20(2)    <-----------GT1 -----DOF2    <---------ARR11(3)           --------->AHL20(2)  --------->AHL20(2)      --------->HSFB2a(2) >GLK1(2)     --------->ARR11(3)  <---------YAB1---------->DOF2<---------AHL20(2)      <---------HSFB2a(2)   tactcacagaacaagagatattaaattttctttatgtttatagtatttaataaagtttatagtatttatttccatatatacatttgtttctgtaagaact  18499600                         --------->ATHB12                       --------------->AGL15                       ==============================================================================                       <---------------AGL15                                           --------------                      <-----------------AGL2                              --------->AHL20(2)                <---------AHL20(1)                                       <---------ATHB12                <---------AHL20(2)                                       ----------->TBP       ------                --------->AHL20(2)                                       --------->AHL20(2)<---------ICU4                --------->AHL20(1)                                   ------------>CBF  <-------------               --------->AHL20(2)                                <---------ANAC58     <--------------             --------->YAB1                --------------->AtSPL8<---------ANAC58     <--------------   atccatttgatactagaataaatttcttcatttggattagattgttcagtacaaaactctatttctggcatgtcaataaataacaaatgctaattttggc  18499700                                                                    <---------YAB1                                                                  --------->AHL20(2) ===MADS_MADS                                   <----------DOF2   <---------AHL20(2) ->AGL15                                       *TSS           <---------AHL20(2) ---->ID1                               --------->ZAT6       <---------AHL20(1)                  <--- --AGL15                              <-----------GT1     --------->AHL20(2)                  <------ ---AGL3                          <----------DOF2       <----------DOF2                  <----------DOF2 ---AGL2                   ------------>CBF    <---------ICU4--------->AHL20(1)     <----------DOF2   tcttaatcttgttgatagaatactaaacttgcaatgctttttacactaatctttatctctttatatatttatttttaaaaactcttctttcctttttttc  18499800                                                                                      ---------------    <---------------AtSPL8                                                            ----------->GT1    --------------->AtSPL8                                                 --------->At4g35610   ---------->DOF2                                               ------>ZmHOX2a(1)    <----------ID1  <---------AHL20(2)                                             <----------DOF2  ---------->DOF2 ------YAB1                                               <---------At5g28300  >>>>>>>>>TBF1      --- -----GT1                    <----------DOF2             <-----------GT1 --------->YAB1      --------   tgatttaaagtacaaaaaaaaaacaatacatctttccattgaactagaagaaaacattttcactgtccttttgaatcagaagaagaaagagaaaaaaaag  18499900                                                   <----------DOF2                                               ------>ZmHOX2a(2)                --------->ANAC46                                               =================================HOX2a_HOX2a                                               ==============================HOX2a_HOX2a                                              =====================================HOX2a_HOX2a                                              ===============================HOX2a_HOX2a                                              ==================================HOX2a_HOX2a                                              <------ZmHOX2a(2)                ------>ZmHOX2a(1)                                             <---------ARR14(2)            <---------ALFIN1                                           --------->DEAR3(1)            ------>ZmHOX2a(1)        <--                                         ------>NtERF2           <---------HSFB2a(1)  <---------ATHB12                                         --------->ABI4(1)       --------->HSFB2a(1) --------->ANAC58                                        ------->GAMYB <---------ANAC58  <---------ALFIN1          ---                <---------DEAR3(2)      --------->DREB2C(2)      --------->HSFC1(2)  --------->ANAC58            --------->ANAC46           --------->MYB46(3)        <---------HSFC1(2)  --------->ANAC46            --------->ANAC58           --------->DEAR3(2)      <---------ARR14(2)  <---------ALFIN1            --------->ANAC58   <---------ALFIN1====================================HOX2a_HOX2a    --- --------->ANAC81      --------->GLK1(1)--------->DEAR3(1)  --------->ETT(1)------>ZmHOX2a(1)    ---- ------>CCA1(2)<---------DEAR3(1)    <---------ALFIN1 <---------ANAC58------>ZmHOX2a(1)  -------->P-- -->DOF2  <---------ALFIN1   <---------ALFIN1--------->ARR14(2)--------->ARR14(2) --------->MYB46(3)-   agatggagagaaacacgccggtgagaaaccctcacacttccaccgccgatctgctttcttggtcggaaactcctcctcctcctcaccactcaaccccttc  18500000                                                                    <---------TOE2(3) ------>NtERF2        --------->ARR14(2)                            <---------TOE1(3) -------At4g35610     <---------ARR14(2)                        <---------At4g35610 ------>LBD16   <---------ARR14(2)                   <---------------AGL15 --->NtERF2     --------->ARR14(2)                   --------------->AGL15 <-----------GT1 ----->ANAC46  --------->ZAT2              <---------DAG2       --------->At4g35610                -- ------->RAP2.3(1)   <---------MYB52(1)    <----------DOF2     --------->GLK1(2)        <----------DOF2 -------->DEAR3(1)<-------TEIL--------->MYB46(3) <----------DOF2--------->ZAT2   <----------DOF2   <-   cgccgctcgttctcaccaggtccgtttcttcaacaaatgttctcactttctctttctatagagagaagctgaggttttttcttctttcttctttcatttt  18500100                                      --------->At4g35610                                  <-----------HVH21                                 <---------MYB46(3)                                <---------AtMYB61                                --------->ALFIN1                               <-------GAMYB                               <------NtERF2    --------->SPL7            <---------DEAR4(2)  <---------RAP2.6(3)        <---------DEAR3(1)                                        --------->AHL20(2)  <---------SPL7             <---------DREB2C(2)                                   <-------TEIL  <-----------HVH21      <---------HSFB2a(2) --------->At4g35610             ---------->DOF2 --------->DEAR3(1)   --------->GLK1(2)      <---------At4g35610          --------->At5g28300 ------->At4g35610   <---------ARR11(3) <------ZmHOX2a(2)                ----------->GT1<---------AHL20(2) --------At4g35610   <---------GLK1(2)<---------At4g35610              --------->At4g35610   cagccgtccgatggaatcagcaagattctaggcggtggtcagatcacagatgaagaagcccagtcgcttaataagctgtaaaagattcatttaatctcta  18500200  Previous    Next  AGI:  At4g39860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39818.1) Range:  from: 18499747    to: 18501636    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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