Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------------->AGL15                                           --------->TOE2(3)                                           <---------------AGL15                                          ===========================================================                                          ----------------->AGL1                                          <-----------------AG                                  --------->YAB1                   <---------TOE2(3)      ----------------->AGL2                 <---------AHL20(2)       ----------------->AGL3             <---------AHL20(2)  <---------ATHB12            <---------AHL20(1)  ------>MYB83------>ZmHOX2a(1)         --------->YAB1         ------>MYB46(1)   ----------->GT1<<<<<<<<<<<<<<<<<LFY  ------->TEIL      --------->WOX13(1)       --------->WOX13(1)--------->YAB1  -------->P <------ZmHOX2a(1)    <---   taatatgtctatcatatatttaagtttacagaccaatcacaatttcctcaattagaaaaaacaaacttaccaatggaaggatagcagtgtatgtccatag  18488100          <---------------AGL15          --------------->AGL15     --------->HSFC1(2)                              <---------AHL20(2)                       -------    <---------ALFIN1                                --------->AHL20(2)                       -------- ----------->HVH21                            <---------TOE2(3)                           --------->YAB1 --------->ANAC58                            --------->DAG2                              <---------AHL20(2) --------->ANAC58                           --------->MYB52(1)                          <---------AHL20(2) =========================MADS_MADS         ---------->DOF2                             --------->AHL20(2) ---ZmHOX2a(1)                       --------->AHL20(2)                   <---------------AtSPL8   --   gactcgacacttctatacatagtactatttgtattcaaattatacataaaggaaataaatctgtctatacatggttttagtaccaagttttttaataaga  18488200                                                      <---------YAB1                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                                   <---------AHL20(2)                                               <---------AHL20(2)                                               <---------AHL20(1)       <---------DOF5.7(2)                                           <---------RVE1(1)          --------->DOF5.7(2)                                          <---------ARR11(3)    <---------ZAT14                                          --------->ARR11(3)    --------->ZAT14                                        <---------TOE2(3)  <---------At5g28300                               ------>MYB46(1) --------->AHL20(2)    --------->TOE2(3) ---->GT1                      ------>MYB83<---------CCA1(1)    --------->SPL7      <-----------GT1 ->YAB1                        -------->P <---------AHL20(1)--------->ZAT6    <---------AHL20(2)    < -------->DOF2        <-------TEIL      ----------->ARR10 <-----------GT1<---------TOE2(3)     ------   aaaaagaaacaattgatagtttgatacattaccaactaggctaagatattttatttatttttacagtacagcgttaacattttttttaacgagaatgaaa  18488300                                     ----------->GT1                                    --------->DAG2            <---------ANAC55(2)     <---------------AtSPL8            ----------->RAV1(2)     <---------TOE2(3)       <---------ZAT6               <---------TOE1(3)  <------NtERF2               --------->AHL20(2)                       --------->WOX13(1) ------>NtERF2          --------->ARR11(3)    --------->ARR11(3)     <---------ATHB12 --------->MYB55(2)     --------->GLK1(2)     <---------ARR11(3)--------->ANAC58                   <- <---------MYB46(3)     <---------ARR11(3)   --------->CCA1(1)  --------->ANAC58                   -- ---------DEAR3(1)     --------->RVE1(1)     --------->RVE1(1)--------->MYB52(1)                  --- --->MYB52(1)   ----------->GT1     --------->MYB59        --------->YAB1 <---------ICU4     --------   cggtggctagagttacctgagtaaaaaatctaaaaaataaggtaaaaatatctgatagcattcgtaacgaaatcaattagtactagacaagaagatggta  18488400                                              ----------->GT1                                             ------->PIF4                                             ------->MYC3                                             <-------PIF4                                             ------->MYC2                                             <-------MYC4                                             <-------MYC2                                             ------->MYC4                                             ------->PIF5                                             <-------MYC3                                            <---------TGA1a                                            --------->TGA1a           --------->DAG2                   <---------O2           <-----------------------TaNAC69(2)<-------PIF5          ============================================bZIP_DOF                                  <---- --------AHL20(2)                           --------->O2  <-----------TGA1              <---------At4g35610 ------->AHL20(2)                          <---------TOE1(2)                          <---------RAP2.6(2) ------>YAB1----------->GT1                ------------>OsbHLH66                <---------TOE1(2) --->GT1  ---------->DOF2                 <------------OsbHLH66          ------>ZmHOX2a(1)      <----   taaaaatagaagaaaagtaaaaaatggcacgagtgaatatgttcgcacgtgtaaaataagcgtcatcatcttctcctcttcccaagtttcggctctcact  18488500                                                            <---------ZAT14                                                     ----------->HVH21                                                     <---------MYB52(1)                    <------NtERF2                                                    <-----------HVH21                    <---------ANAC46                                                    <-----------TGA1                     <---------ANAC58                                                   <---------ANAC58                      <---------ANAC58                                                   --------->bZIP60(1)              <---------MYB46(3)                                                   <---------ANAC58                 --------->MYB52(2)                                                   <---------ANAC55(2)              <------MYB83                                                   --------->ANAC55(2)              <------MYB46(1)                                                   <---------bZIP60(1)             <---------AtMYB61                                                --------->ARR14(2)                 <---------MYB46(3)                                                <---------ARR14(2)                 <---------DEAR3(1)                                               --------->GLK1(1)     <---------ANAC55(2)<------NtERF2                                               <---------GLK1(1)     --------->ANAC55(2)<------------                                              ----------->ARR10 <---------------AtSPL3<---------DEAR3(1) -----DAG2                               <---------LBD16    --------->ZAT14       <---------MYB52(1) ------DOF2  *TSS        --------->ZAT6 --------->ALFIN1    <---------ZAT18      <-------GAMYB   ttctctcgttctctctctctctctctatctctatctctcgatttgggggagttccgtcacggtggactagtacgtctcgttgccgttggtggcgtagtcg  18488600              <-------GAMYB             <---------ANAC46             <---------DEAR3(1)            <------NtERF2          <---------DEAR3(1)                                         <---------GLK1(1)         <---------LBD16                             <-------GAMYB<---------YAB1         ------>ZmHOX2a(1)                          --------->MYB111(2)  <---------AHL20(2)                                <---------MYB46(3) --------->AHL20(2)             <---------HSFB2a(2) --------->MYB55(2)      --------->GLK1(1) <---------AHL20(2)             --------->HSFB2a(2)<--------P   <-----------GT1 --------->HSFB2a(2) -----------TaNAC69(2)<-------TEIL               <---------MYB46(3)  --------->GLK1(1)              <   gaattaatttcctcggcgttgagattcacatggtctagaattctagctaagtggttgttgttgttgttacgatttccgatttctcgagttttttttttat  18488700                          --------->LBD16                         --------->LBD16                         --------->HSFB2a(2)                        --------->HSFB2a(2)                        <---------HSFB2a(2)            <---------ANAC58            <---------ANAC46                 ------->TEIL  ----------->GT1            <---------ANAC58                 <---------ARR11(1)                  --------->AHL20(2)         <---------MYB52(1)    <---------ALFIN1           <---------TOE2(3)      <---------AHL20(2)  <---------At4g35610   <---------LBD16     <---------CCA1(2)      <-----------HVH21 -----------GT1  <-----------GT1    --------------------->WRI1     <-----------TGA1           <------   atttagcttctgtttcgtttatccctcccggagacactccttggtcgaatctctcatgctgaggtaattcgtcatggatttgtttaattgcataagcttt  18488800                                                                                                    <                                                                                                   --                                                     <---------GLK1(2)                            <--                                                     --------->ARR11(3)                          <---                                                     <---------ARR11(3)                          <---                                               ------->TEIL                             --------->ARR14(2)                                               --------->ARR14(2)                 <------ZmHOX2a(1)<-                                               <---------ARR14(2)              <---------ICU4    <---                       <---------MYB52(1)      --------->GLK1(2)               --------->YAB1<-------                  <-----------GT1         <-----------GT1     <----------DOF2 --------->ICU4 <------- ----DOF2     <----------DOF2           <---------WOX13(1)---------->ID1------->TEIL<------ZmHOX2a(2)   tttgcaattgtctaagcttttatcggtttgttttgttttttgatttacgaatctagattttgcgctttcttatgtatgtaatcaggatcaaatttgctgg  18488900    <-----------GT1                   <---------ANAC58                                          <---- -------GAMYB                       <---------ANAC46                                            <---- --------->GT1                      <---------ANAC58                                            ----- ------P                            <---------ANAC55(2)  <--------HAHB4                         <---- ------ANAC58                       <---------ANAC58     --------->YAB1                         ----- ------ANAC58                       --------->ANAC55(2)  <---------ICU4                        <----- --------MYB46(3)             <---------YAB1            <---------ATHB12                 --------->ALFIN1 ----GAMYB                <---------GLK1(2)  <---------YAB1                          ---------->DOF2 --ANAC58                <------ZmHOX2a(1) <-----------GT1    <---------YAB1      ------>ZmHOX2a(2) --ANAC58               <---------YAB1<---------ANAC58 ------->TEIL    <-----------GT1--------->DAG2   gttgttaaacaatttttgtctgtgttaggattctaattacgcgtgttactatacatgaatcattttcattgtttttcttcttgatccaaaagtgtgagaa  18489000  Previous    Next  AGI:  At4g39850.1    Description:  PXA1 (PEROXISOMAL ABC TRANSPORTER 1). similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G54350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39819.1); similar to hypothetical protein OsJ_016078 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32595.1); similar to putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:BAD88253.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain ABC tr Range:  from: 18488513    to: 18497130    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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