Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ANAC55(1)                                        --------->ANAC55(2)                                        <---------ANAC55(2)     <---------YAB1                                        ----------->GT1      <---------YAB1                                        --------->ANAC58   --------->ATHB51                                        --------->ANAC46   --------->ATHB12                              <-------TEIL                 -------->ATHB1                            --------->ARR14(2)             <---------ICU4                            <---------GLK1(2)             --------->ICU4                  --------->YAB1        --------->ANAC58  <---------AHL20(2)                 <-------TEIL--------->ARR14(1)           --------->AHL20(2)                      ---          --------->YAB1    <---------ARR14(2)            <---------ATHB51    ----------->HVH21  <--- --GT1   <---------YAB1     --------->ARR11(1)     <----------ID1<---------ZAT6                <-----   tagtttgcattatcatacattcatactatagattcgctaaacacgtaaaaatagagacaaattattagtattaaacagaagtgacaaataccattttaga  18484500                                                                          <---------At4g35610                                                                          --------->At4g35610       --------->KAN4(2)                    <---------DOF5.7(2)           <---------ZAT2     <------ZmHOX2a(2)                    --------->DOF5.7(2)             --------->ZAT2    <---------ARR11(3)                    <---------MYB52(1)  <-----------------AGL1    --------->ARR11(3)                   <-------GAMYB   ------->TEIL   <--------P                  - ------>ATHB12                          <---------MYB46(3) --------->ICU4--------->MYB111(1)        - ------YAB1                     <-----------GT1      --------------->AtSPL8                    <----- ----At4g35610                <---------AHL20(2)  <------ZmHOX2a(2)  <---------YAB1           -------   tgattagatcattcgattgaatagactcccattttaacgaggtcgttatcggatcaatgtacttattcaatatggtagctgcacatacaaaactagatac  18484600                                        <---------AHL20(2)                                     --------->AHL20(2)                                     <---------AHL20(1)                                     --------->AHL20(1)                        --------->ARR11(3)                        --------->AHL20(1)       --------->HSFB2a(2)          --------->ICU4                                           ------>MYB83 -------->TOE2(3)       <---------AHL20(1)                           <<<<<<<<<<<<<<<<<LFY    ------>MYB46(1) -------->YAB1         --------->AHL20(2)                           <---------ETT(2)    <-----------GT1 --TEIL<---------HSFB2a(2)     ----------->GT1            <----------DOF2         <---------YAB1 -->CCA1(2)        --------->AHL20(2)<---------AHL20(2)  <---------DAG2        <------ZmHOX2a(2)    -   aatattaatctagaaatcaaactaaatatatagttgtaatattttaagtggaaagatagccttttgtctctcgacaatgggatcaccattaaaccaaatc  18484700                                                         <---------ANAC58                                                         <---------ANAC46                                                         <---------ANAC58                                                    --------->YAB1                                                    -------->HAHB4                                                    <---------ICU4                                                   <---------YAB1                ----------->ARR10             --------->ANAC46         <---------ANAC46                     --------->ANAC55(2)       --------->ALFIN1          <----------DOF2 --------->YAB1                    --------->ANAC46 -------->CCA1(2)    <---------YAB1         <-----------GT1                     <-------TEIL   agatagaagttgtgggagtagttatgcttaaattccttttgttttttcacataataatagcgtatgaaaatttagttacacatacacaaaaatgtctctt  18484800                                               --------->ATHB12                                               <---------ICU4                                               -------->HAHB4                                              <---------ATHB12                                              --------->ICU4                                              <---------YAB1                                        --------->ANAC58                                        --------->ANAC58                                      ------>ZmHOX2a(2)                                    <---------ARR11(3)                                    <---------AGP1                                   <---------CCA1(2)                                  ------->TEIL                           <---------------AGL15                                    --------->YAB1                           --------------->AGL15                               <-------TEIL        --------->YAB1    <-----------------AGL3    <---------YAB1          --------->ANAC58        <---------AHL20(2)<-----------------AGL2 <---------WOX13(1)         <---------ANAC55(2)      <-----------TBP     ----------------->AGL3<------------CBF            --------->ANAC55(2) <----    <---------AHL20(2)<---------DAG2--------->ARR11(3)          <-----------GT1------------>CBF*TSS    --------->AHL20(2)<----------DOF2<------ZmHOX2a(2)<------------CBF      --------->ANAC58   ------   ctatatttatttataagaaaacgacttttctaattttagatctcgcaaatgattgctattgtttttttactactactcacgtacaatgaaactttccaac  18484900                            ------>MYB46(1)                          <---------MYB59                        ------>MYB46(1)                        -------->P                        ------>MYB83                      <---------MYB55(2)                      <---------MYB111(2)                      <---------MYB46(2)                      <---------MYB111(1)                      --------->MYB46(3)                   <-----------GT1                                                             ------                <---------ICU4       --------->WOX13(1)                                        <-----     <---------AHL20(2)--------->MYB55(1) <---------ANAC55(2)             --------->AHL20(2)   ------ -----ATHB12  --------->ANAC55(2) --------->ANAC46                --------->YAB1        --------->At4g35610 ------>CBF <-----------GT1 ------>MYB83--------->YAB1--------->AHL20(2)  <---------AHL20(2)  <------   aattcattttttttttacttatcacctaccaaatacaaacaatcacataaatacaaaaaaatgcagaatcatataaaaaattagacaagtagcagagaat  18485000               <-------GAMYB               --------->At5g28300              ----------->GT1            --------->ABI4(2)         <---------DEAR3(2)        <---------DREB2C(2)        <---------DEAR3(1)      --------->MYB52(1)     ----------->HVH21     ----------->TGA1 ----------->RAV1(1)                          ---------->DOF2 --->ARR14(2) <---------MYB46(3)     --------->YAB1 ----ARR14(2)<---------ANAC46      <---------------------WRI1 --->GLK1(2)<---------ZAT18     <-------TEIL<---------YAB1 ---GLK1(2)--------->ALFIN1 <---------------AtSPL8          ----------->GT1                    <-----   ctgcaacatgacggtgcggttaaacagtagtaagtacattgatattatcaaagggactgaattagtaaattctctggtctccatcttctctcttatcgtt  18485100                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                          --------->ZAT2                                                                                         --------->ANAC58                                                                                <---------AHL20(1)                                                                                --------->AHL20(1)                                                                                <---------ARR11(3)                                                                               <---------CCA1(2)                                                                             ========================         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                  ========================     --------->ANAC58                            <---------ANAC58            <---------------AGL15     --------->ANAC46                    --------->ZAT6                      ------>ZmHOX2a(1)     --     --------->ANAC58<---------AHL20(2)<-----------HVH21               <----------DOF2   --------->ANAC58 ------HVH21   --------->YAB1     --------->ZAT18<---------ANAC58<----------DOF2--------->ARR11(3)<--   cacacacacacaaacactcatatataaacacatatgcacactgtcactaatgcttctctctctctctctttctcttttcctatatattgacaagcttgcg  18485200              ================================HOX2a_HOX2a              ------>ZmHOX2a(2)             =================================HOX2a_HOX2a             <------ZmHOX2a(2)            --------->ARR11(3)            <---------AGP1            --------->ARR14(2)            <---------ARR14(2)            <---------ARR11(3)            --------->AGP1              <---------TOE1(2)          ----------->ARR10             <---------TOE2(2)                  <---------ANAC58     <---------ZAT18                   ------>ZmHOX2a(1)                   <---------ANAC58    <---------MYB52(1)             --------->GLK1(1)                <---------ATHB12 =====HOX2a_HOX2a                 <---------ARR14(2)               --------->ANAC46 ====HOX2a_HOX2a                  --------->GLK1(1)                --------->ANAC58      --------->DAG2 ---->ZmHOX2a(2)                  --------->ARR14(2)---------->DOF2--------->ANAC58 <---------HSFB2a(2) ----ZmHOX2a(2)            --------->ALFIN1 <-----------HVH21    <---------ALFIN1   --------->HSFB2a(2)   atctctgttcgctagatctgtctgaaacagtgaggggattcctaggtttcagagcaaagtaatgtctccactcaagtacttgtgttttagaaaggtactc  18485300                                                                                         ------>ZmHOX2a(1)                                                                           --------->REM1(1)     ----                                                                       --------->At4g35610<---------ICU4                                                                  <---------ICU4       ------>ZmHOX2a(2)                                                                  --------->YAB1      <------ZmHOX2a(2)                                                                 <---------YAB1      <---------ARR11(3)                                                                --------->ARR11(3)   --------->ARR14(2)                                                                <---------ARR11(3)   <---------ARR14(2)                                                               --------->YAB1        --------->ARR11(3) <---------MYB46(3)                      <----------DOF2 <---------At4g35610         --------->AGP1 <---------REM1(1)                  <<<<<<<<<TBF1        --------->At4g35610         <---------GLK1(2) <-----------RAV1(1)     ------>ZmHOX2a(1)   <----------DOF2  <---------YAB1       ----------->ARR10   ttgttgttgctctattccagtctcttcctattctcttcttcttctttctttgcctcatcagttgatgatcatgagctacaacgaatagatcctcatttcc  18485400  Previous    Next  AGI:  At4g39840.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO21162.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48661.1) Range:  from: 18484895    to: 18486808    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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