Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->At5g28300                                                         --------------->AGL15                                                         <---------------AGL15                                                        ----------------->AGL1                                                        <-----------------AGL1                                                        <-----------------AG                                                     ------>ZmHOX2a(1)                                                  <------ZmHOX2a(2)                                                 <---------ARR14(2)                                <-                                                 <---------ARR11(3)                  <---------ANAC58       <------NtERF2                             --------->ARR14(2)                  <---------ANAC58     <---------LBD16                             --------->AGP1<---------TOE2(3)    --------------->AtSPL3 -------ZAT2                                     --------->ARR11(3)                 --------------->AtSPL8 ------>ZAT2                        ---------->DOF2------>ZmHOX2a(2)     <---------LBD16------->TEIL -->MYB46(1)---------->DOF2   ---------->DOF2    <---------GLK1(2)       <-----------RAV1(2)      <-- -->MYB83 <------ZmHOX2a(2)--------->YAB1      ----------->ARR10----------->GT1     <-------TEIL  <--   agcttagtcgggatcaaagcgtagagccatcgtaaagagaaaggaaccatagatcctctccgattagggtaaatctcagggaacgattcgtacctgtaat  18477500                                                              <---------HSFB2a(2)                                                              --------->HSFB2a(2)                                                         --------->ZAT2                                                         <---------ZAT2                                                         <---------HSFB2a(1)                                                         --------->HSFB2a(1)                                                         <---------HSFC1(2)                                                         --------->HSFC1(2)                                                  ----------->HVH21    --------->LBD16                               <----------ID1   <---------ANAC46                         <---------At4g35610 --------->SPL7            <---------At4g35610   --------->DEAR3(2) ----------HVH21  --------->ANAC58       <-------TEIL   ----------->ARR10 -------ANAC58    --------->ANAC46    <---------HSFC1(2)<-----------ARR10                       ----- -------ANAC58    --------->ANAC58    --------->HSFC1(2)------->TEIL            <--------P      <----   gcgtcccgtcgaaatcgtgcaaggaattaagctcatgagaagcttcatcggagcgacgaagcttcgcgagagccataacttggtaagtgagataagtgag  18477600                                                         ------>ZmHOX2a(2)                                                 <---------HSFB2a(2)                                                 --------->HSFB2a(2)                                          <---------GLK1(1)                                          <---------CCA1(1)                                          --------->CCA1(1)                                          --------->GLK1(1)                                          --------->RVE1(1)                                          <---------RVE1(1)              --------->TGA1a                                         --------->ARR11(3)<---------ANAC58                  <-------                                   <---------ANAC46    --------->ARR14(2)==================bZIP_DOF                                   <---------ANAC58    <---------ARR14(2)--------->O2        <-------                            --------->ZAT18<---------ARR11(3)            <---------TGA1a--------->ALFIN1          <----------DOF2   <---------ZAT14--------->ARR11(3)            <---------O2  ------->PIF5 ---->At4g35610      <------ZmHOX2a(1)   <---------ARR11(3)<---------ANAC58     ---------->DOF2 <---- -----At4g35610   <------ZmHOX2a(1)<---------ANAC58   <------ZmHOX2a(1) <---------LBD16<-------PIF5   atgctcgtgaggctttgtgaggaggaagagagctctggcttgagatatcttctcgaggatcgcttgccatgagccacgggtcgaaagctcgtggagcgag  18477700                                                                <---------ANAC46                                                                <---------ANAC58                                                       <---------ANAC46                                                     ------>NtERF2                                                     <---------ATERF1(1)                                                    ----------->HVH21                                                    --------->DEAR3(1)                             --                                                 ------>ZmHOX2a(2)                             <-----                                                 <---------DEAR3(1)                            ------                                               --------->ARR14(2)                            <-------      <---------ANAC46                         <---------ARR14(2)                            <-------    <---------ANAC58                        <--------P<------NtERF2                         <--------    ------>ZmHOX2a(2)                       ==============================MYC_MYB          <---------MYB52(1)    <---------ANAC58                      <---------MYB46(3)    <---------TGA1a            <------NtERF2   <------ZmHOX2a(2)                      --------->MYB55(2)    <---------O2              <---------RAP2.6(3)  --------->ARR11(3)                     <---------AtMYB61      <---------ANAC58          <----------  <---------ARR11(3)                     --------->ALFIN1       <---------bZIP60(2)       ------>NtERF2 --ANAC58                               <---------MYB52(1)   ----------->HVH21           <---------ANAC46 --ANAC58                              --------->LBD16--------->ATERF1(1)                <---------ANAC58 -----ZAT2                           <---------LBD16<---------DEAR3(1)                   <---------ANAC58   ccgagatcgtgtgttaattcgtcgagcgaattgaatcgttccggtggtagatcggcgacggatgtgacttgggatgaggctaattcgaatgccgtcggtt  18477800                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                 <---------LBD16                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                              <---------GLK1(1)                                                                             ----------->ARR10                          <------NtERF2                                      ---------->TaMYB80          --------->WRKY38(1)       --------->ALFIN1                    <---------ANAC46 --------->RAV1(2)      <---------RAP2.6(2)                          --------->ARR14(2)           --- ----ARR14(2)           <---------DREB2C(2)                          <---------ARR14(2)------>ZmHOX2a(2) --->ARR14(2)           <---------DEAR3(1)                           <---------GLK1(2) <-------TEIL --DEAR3(2)             <---------ANAC46                          <---------ANAC46 --------->LBD16<-- --MYB46(3)      ------>NtERF2   --------->ATHB12                 ----------------->AGL1     <------- -DEAR3(1)--------->WRKY12<-------GAMYB  <------ZmHOX2a(1) <---------ANAC46 <--------P<------ZmHOX2a(2) -HVH21<---------MYB46(3)<---------MYB46(3)              <-----------HVH21----------->GT1    <-------   cccctgcatcggttgactctgccatggcggtggaatcagtggaggagggattgaattcgggtcgggtttcggattcgggtaaatccggatccattgctgg  18477900                                      ----------------------->TaNAC69(2)                                      <----------DOF2                                     *TSS  --------->ARR14(2)       --------->LBD16            <------MYB46(1)      <---------ANAC46            <------MYB83 ------>At4g35610                --------->MYB59 -------At4g35610                <---------AtMYB61        ------------>CBF             <----------DOF2 --ANAC58                 ----------->RAV1(2)          <----------DOF2    --------->ANAC58 --ANAC58               <-----------GT1    <---------ARR14(2)             --------->ANAC58        ---   agatgactccgtgaacattgtggaagtaacctggtttggtctttggatttgggtcgtctttccaatagataccattacgctaaattcttctttttggcat  18478000                                                                            --------->YAB1                                                                            <---------ICU4                                                                   <---------CCA1(1)                                                                   <---------RVE1(1)                    --------->AHL20(2)                            --------->ARR11(3)              <--                    <---------AHL20(2)                            <---------GLK1(2)        <---------ICU4                   --------->AHL20(2)       <---------YAB1        <---------ARR11(3)      <---------ATHB51               <---------AHL20(2)         <---------ICU4        <---------YAB1            --------->ICU4               <---------YAB1             --------->YAB1        <---------TOE2(3)  <------ZmHOX2a(2)           <---------YAB1                <---------YAB1 <-------GAMYB<---------AHL20(2)   --------->AHL20(2)       <---------GLK1(2)                 --------->ICU4<---------MYB46(3)  <---------YAB1 <---------AHL20(2)     <---------TOE2(3)                --------->ICU4   ----------->GT1     <---------AHL20(2)     === ------>AHL20(2)  <---------YAB1      <---------YAB1  <---------DEAR3(1) --------->YAB1 --------->YAB1   aaaaatttagattattttttattaaaaaaaaacatttgatatgattatgattttaggcggtttattaagatttttttataattagatcaaaaataattag  18478100                                                                                         <---------ICU4                                                                                 <---------AHL20(2)                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                                                                             --------->ATHB51                     <---------ARR14(2)       --------->AHL20(2)             <--------ATHB1                     --------->GLK1(2)        <---------AHL20(1)             <--------HAHB4                     --------->ARR14(2)       <---------AHL20(2)             --------->YAB1      <---------------AGL15               <---------AHL20(2)                 <---------ICU4      --------------->AGL15              <---------AHL20(1)                 --------->ICU4         <-     <-----------------AGL2             <---------CCA1(2)                   <---------ATHB12      --- ----ZmHOX2a(2)  <------ZmHOX2a(1) <---------GLK1(1)                        --------->AHL20(2)<------ =======================HOX2a_HOX2a--------->GLK1(1)  <---------AHL20(2)    <---------ATHB51<--------   atcaaatactaaaattggaggagaatccaaactttggatttcatatattttattttttaattcactagaaatgaaacaataattaaatccaaaattacaa  18478200             ------>ZmHOX2a(2)                                                                     <-            <------ZmHOX2a(2)                                           <---------ANAC55(2)     <----           <---------ARR14(2)                                      ----------->GT1              <---- ----------GT1--------->ATHB12                              --------->ANAC58                   ------ ------>AHL20(2)<---------WOX13(1)                   <---------ANAC46   --------->ANAC55(2)    ------ ---YAB1   --------->ARR14(2)                 <----------DOF2 ---------->DOF2             --------->YAB1 ---GT1<---------LBD16   --------->YAB1   <---------YAB1    --------->ANAC58              -----------   ttaacttgtctcggatcgattgatcaatgttgattttttgtcttatgacttttcttcgtgtaacgaaaggagttacttaaatggtggagtaatggtaata  18478300                                                             --------------------->WRI1                                                            --------->ATHB12                                      <-----------GT1      <---------YAB1                  ------->GAMYB                                   <---------AHL20(2)    <---------bZIP60(1)              --------->MYB46(3)                                 <---------YAB1          <---------TGA2(1)        <---------AHL20(2)                          --------->YAB1                 --------->REM1(1)    <---------CCA1(1)                    <---------ANAC55(2)                  --------->bZIP60(1)  <---------RVE1(1)     - ----------GT1      --------->ANAC55(2)           <---------ANAC55(1)        <---------ARR11(3)     - -----ICU4 <---------AHL20(2)--------->YAB1       <---------ANAC55(2)        --------->ARR11(3)     < -----AHL20(2)    <-----------GT1<---------AHL20(2)    <-----------GT1     ----------->ARR10  ------- --->ICU4 --------->YAB1 ----------->GT1        <-----------GT1         <---------ANAC46  <----------ID1 --->AHL20(2)  ----------->GT1  <---------AHL20(1)--------->ANAC55(2)  <---------TOE2(3)--------->MYB52(1) >GT1    <---------YAB1  <---------ZAT6       <-----------HVH21    <---------ICU4--------->AHL20(2)--   aataccatgttataatattgttacatactgataatattattttccccatgttacatgttacatcattgatttttacgtagatatttaatataacgaccaa  18478400  Previous    Next  AGI:  At4g39820.1    Description:  binding. similar to hypothetical protein [Vitis vinifera] (GB:CAN78542.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 18476001    to: 18477937    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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