Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ------>NtERF2                                                                           --------->LBD16                                                                          <---------ANAC46                                                                         <---------LBD16                                                                        <---------ATERF1(1)                                           <---------LBD16              ------>NtERF2                                       <---------DOF5.7(2)             <---------ALFIN1                                       --------->MYB52(1)              --------->DEAR3(1)                                     --------->DOF5.7(2)              --------->ATERF1(1)                                    --------->At5g28300              ------>NtERF2                                    <-------GAMYB                   --------->DEAR3(1)                                   <---------MYB46(3)               --------->ANAC46                 --------->GLK1(1)<---------RAP2.6(2)       --------->At4g35610             <------ZmHOX2a(1)    <---------DEAR3(1)   --------->YAB1<---------ATERF1(1)     --------      <---------YAB1            ------------>AtMYB77  <-------TEIL<---------ATERF1(1)       ---------    --------->CCA1(2)          --------->ALFIN1 <---------At4g35610<---------LBD16          --------- ------ZmHOX2a(1)<---------GLK1(1)<---------ANAC46<---------YAB1 --------->ARR14(2)<---------TOE2(3)   gaggagttatgagaaggagatttctcaggctcagtggcggttaacgacggagatgattcatgagcagtctccgcctccgcgtattgacgaagacaagctc  18464400                                      --------->At4g35610                                   --------->At4g35610                                   <---------At4g35610                                --------->ZAT18                                <---------At4g35610                                --------->At4g35610                                <---------ZAT14                                --------->ZAT14                             --------->ALFIN1                            ------->MYC2                            <-------MYC4                            <-------MYC3                            <-------MYC2                            ------->MYC4                            ------->MYC3                           <---------ANAC55(2)                           <---------TGA1a            --------->MYB52(1) --------->ALFIN1           --------->ZAT14 --------->TGA1a     <---------ANAC55(2)   <--------ABF1                       <---------ANAC58     --------->ANAC55(2)   --------->O2            --------->HSFB2a(2)     <---------ANAC46      <---------O2  ---------->DOF2       <---------ANAC58    <---------LBD16        --------->ANAC55(2)     <---------HSFB2a(2)                            <-- ->ZAT2    --------->ZAT18 =========================bZIP_DOF   <---------ANAC46             <-------- >ANAC58   <---------ZAT14 <---------ANAC46     --------->ARR14(2)                      <----------DOF2 >ANAC58<---------ANAC46  ------------>OsbHLH66 <---------ARR14(2)                  <----------DOF2--   cgatgttacggagtgaacggatgtaagacacgtgtgcagcggctaaagcacatctggaatccatagcttgtttgacaaatctcttcctttctttgcatag  18464500  <---------At4g35610 -------REM1(1)              <---------ANAC58                                             --------->AHL20(2) -AtLEC2                     <---------ANAC58                                             --------->YAB1 -------->DOF2  <---------YAB1<----------DOF2                      ----------->HVH21--------->TOE2(3)   atgaagcggctcgttcttcttattcatcgatgctttcgagtttgaacatcccattttctccaatatcgaatgacccattgagaaaaacttaataaaaatc  18464600                                     <-------GAMYB                                    ----------->GT1                                    --------->MYB55(2)                                    <---------MYB46(3)                             ----------->HVH21               <---------ARR11(3)                       --------->GLK1(1)                     --------->ARR11(3)                       <---------GLK1(1)    --------->MYB52(1)        ----------->GT1<----------ID1                    --------->LBD16--------->ALFIN1      ---------->DOF2     ---------->DOF2  <------   gaaactttggatttgttctaccctgaaatctctcacggtggttacaaaacagaacaaactaaagaactcatttcgaaaaaaaagaaaatgacaagtcttt  18464700                           <-------GAMYB                         <---------ANAC58                         <---------ANAC46                         <---------ANAC58                 <----------DOF2                <---------------AGL15                --------------->AGL15                --------->TOE2(3)                                                     --------->MYB111(1)               ----------------->AG                                         ---------->DOF2         <               <-----------------AGL1                                   <---------LBD16           ---               <-----------------AGL3                                  --------->AtLEC2           <--               <-----------------AGL2                             --------->YAB1      <---------MYB46(3)               ====================================================================================== ----DOF2 <------------------------ANAC81                <---------REM1(1)--------->LBD16 <---------LBD16   ggggttttgttttgttttcctttaatggcgtttgtgagaattaagaagaacagagtgagaagtagctatcaccatgcggaaaggagagtagttggggaat  18464800             --------->GLK1(2)           --------->HSFB2a(1)           <---------HSFC1(2)           <---------HSFB2a(1)           --------->HSFC1(2)        <------ZmHOX2a(1)      <---------TOE2(3)                                <----------DOF2 ---------------AGL15                           --------->DAG2 ------>AHL20(2)       <---------ANAC55(2)--------->TOE2(3)         --------->ARR14(2) -------AHL20(2)  *TSS --------->ANAC55(2)--------->TOE1(3)         <---------ARR14(2) ===============MADS_MADS   ------------>CBF   ---------->DOF2      --------->ARR11(3)   ttatatataaggaagaatccaaaatacttattcaatgagagaaacctgaaaaaggagctttgatcagacaaatcttgaacaaaatggtctgagagagaga  18464900                                                                                    --------->ZAT14                                                                                    --------->ZAT18                                <---------ANAC58                               ---------->DOF2                                <---------ANAC58                        ----------->GT1                                <-------GAMYB  <---------HSFB2a(2)      <----------ID1    <---------ARR11(3)                            <---------ANAC58   --------->HSFB2a(2)     ----------->GT1    --------->ARR11(3)              --------->ALFIN1 <---------MYB46(3)      ----------->GT1 <---------TOE2(3) <---------RVE1(1)            <---------ANAC46--------------------->WRI1----------->GT1---------->DOF2<---------ZAT14            --------->ALFIN1<---------ANAC58<-----------GT1    --------->TOE2(3)--------->DAG2   gagagagagagagggtgtggagaagttttgtcttggttgcatcgttttacgagaagaagataaaacattagtaaaggaaaaaaaagtgcagagattttag  18465000                                                                            ----------->RAV1(1)                                                                          --------->At4g35610                                                                         --------->ANAC46                            --------->At4g35610----------->GT1   <---------ARR11(3)                <-                         ---------->DOF2      --------->DAG2     --------->GLK1(2)      --------->GLK1(2)             <------ZmHOX2a(2)               ---------->DOF2     <---------ARR14(2)    <---------GLK1(2)            <---------ARR11(3)            --------->AHL20(2)     --------->ARR14(2)    --------->ARR14(2)            --------->ARR11(3)      ----------->GT1---------->DOF2   ------>ZmHOX2a(1) <---------ARR14(2)   ttcattccaaaacagatcatttacttcaaaagctgagctagaaaataaaaagttaaagcagtgagaaaatcctagcagcaacaatttcagattctctctc  18465100                                     --------->ATHB12                            <----------DOF2                               <---------YAB1                       <---------AtMYB61                                 --------->AHL20(1)            <---------ARR11(3)      <---------YAB1                <----------DOF2            <---------ARR14(2)   <---------------AGL15  --------->ANAC58 <---------AHL20(1)            --------->ARR14(2)   --------------->AGL15  --------->ANAC58 <---------ARR11(3)      <---            --------->GLK1(2) <-----------GT1    ------->TEIL<---------ALFIN1               <-------- --------HSFB2a(2)  --------->ICU4 <----------DOF2    ---------->DOF2    --------->ARR11(3) ---------   tctagatgctacaaaatctgtagttatggtctttactctttattgaatatgaacatgaaagctacacactttgaatatttttgttttcttctcatttatt  18465200                                                                               <---------AtLEC2                                                                             <---------YAB1                             --------->ANAC46                          <---------TOE2(3)                     <---------YAB1                                    <---------TOE1(3)            -                  <---------SPL7                                       <---------YAB1          ------                --------------->AtSPL3----------->GT1               --------->ARR14(2)       <-------    <---------MYB52(1)    --------->TOE1(2)                         <---------MYB52(1)       -------- --------GT1    <---------------AtSPL3<---------ANAC46  <----------DOF2<---------AtMYB61     -------- -AHL20(2)      --------->ZAT6        <---------ANAC55(2)           <---------ARR14(2)       <------- >AHL20(2)  <XXXXXXXXXXXXXXXXXXXXMIR406            <-----------GT1 <-------GAMYB    ------->TEIL<----   aacttcggtaattggattacagtacgattctacgagagttatgtgaaacctagttactctttttttttcggttatggttgtgaatggaccgattgagctg  18465300  Previous    Next  AGI:  At4g39790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G27090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49895.1); contains InterPro domain Protein of unknown function DUF632 (InterPro:IPR006867); contains InterPro domain Protein of unknown function DUF630 (InterPro:IPR006868) Range:  from: 18462184    to: 18464818    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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