Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->At4g35610        <---------At4g35610        --------->ZAT2        <---------ZAT2    ------>ZmHOX2a(2)   --------->GLK1(1)   <------ZmHOX2a(2)   <---------GLK1(1)  <---------AGP1  ------->TEIL  <-----------ARR10  --------->ARR11(3)  <---------ARR11(3)                                                                             <---  <---------ARR14(2)                                          <---------RAP2.6(3)                <---  --------->ARR14(2)                                       --------->At4g35610                   ---- ----->MYB52(1)                                            <---------At4g35610                   ---- -----WRKY12                               <---------------AGL15                        --------->ALFIN1 -----WRKY38(1)               <----------DOF2        --------->GLK1(2)   --------->ATHB12      ------ --ANAC46  -------->P      <---------ZAT18 ------>ZmHOX2a(1)  <-----------HVH21       <----------DOF2   aacggatctcagctacccattttccccagtgcctttgtctaactcctctatagagtttctgagcggtcatgttcttcattgggacaggctttggggctag  18458800                                                         --------->DAG2                                                     <------MYB46(1)                <---------O2                         <------MYB83--------->ZAT2                --------->O2                        --------->MYB59                <---------ANAC58                 --------->ARR14(2)                <---------ANAC55(2)         <------MYB46(1)      <---------At4g35610           <---------YAB1                   <------MYB83 <---------AtMYB61        --------->GLK1(2)    <---------ZAT2 <---------ANAC46     <---------ZAT2 ------ARR14(2) <---------ANAC55(1)        --------->MYB111(1)   --------->At4g35610 ------GLK1(2)  <---------ANAC58           <---------AtMYB61   --------->ZAT18 ----->ARR14(2) --------->ANAC55(2)     <---------ARR14(2)   <-----------HVH21                <------ ----->ARR11(1) <---------ANAC46        --------->ARR14(2)  --------->ALFIN1                --------- ----->ARR10  <-----------GT1<---------At4g35610 <---------ARR14(2)                        <---------YAB1   atttggagagattatgttacgtctctggttaagctggttttggatttggtggatttggtaaggtgtgagctggtttagaccgagagatgtggtttgattg  18458900                                                     <---------TOE1(3)                        -------                                             <---------ANAC46                                 <------                                            <---------MYB46(3)                             ------>ZmHOX2a(2)                                            <------MYB46(1)                               <------ZmHOX2a(2)                                           <---------AtMYB61                             <---------AGP1                                   --------->GLK1(2) <---------TOE2(3)                   <---------ARR14(2)                               >>>>>>>>>TBF1<------MYB83                                 --------->ARR11(3)                         <------ZmHOX2a(1) <---------MYB46(3)                            <---------ARR11(3)                     --------->TOE2(2)    <--------P --------->DAG2 --------->YAB1       --------->GLK1(2)                     --------->TOE1(2)  --------->ALFIN1         <----------DOF2         --------->ARR14(2) ---WOX13(1)        <---------ANAC55(2) <-----------RAV1(1)     <---------ANAC58        <------ZmHOX2a(1) >ATHB12            --------->ANAC55(2) <---------ZAT6          <---------ANAC58    ---------->DOF2   aaaccgaagactgtgtttgaatacgtaggagaagaagaatcagtgttggtggtataaggttgaagtgctttcatgagctcttcttgaaaaggatctgtgt  18459000                              <----------DOF2                           <---------ARR11(3)                           <---------AGP1                           --------->ARR11(3)                           ------->TEIL   <------ZmHOX2a(1)                           --------->ARR14(2)                           <---------ARR14(2)          --------->ARR11(3) ====================HOX2a_HOX2a         <---------CCA1(2)<---------CCA1(2) -->ALFIN1<---------ARR11(3) ------>ZmHOX2a(2)                   ----------->GT1 -----RAV1(1)       ------>NtERF2---------->DOF2    --------->AHL20(2)      <---------ALFIN1   tgctattgaacatatctatggctgccatggatctttaaagactaggaaacaaaattaaaacagagagggattaaaaacacaccctcttagtcgattgaat  18459100                      --------->ANAC58              ---------->DOF2        --------->RVE1(1)                                                  ---------->ID1       --------->ARR11(3)            --------->YAB1                       *TSS       --------->GLK1(2)            <---------YAB1                       <-----------RAV1(1)       <---------ARR11(3)  --------->DAG2                             <-----------GT1      <---------GLK1(2)   ---------->DOF2                        ---------->ID1<----------DOF2   --------->YAB1     --------->ANAC58                     <---------AHL20(2)  <---------DAG2   agaaatcaaaatctctgaaagaacaagaaaaaggaagaattatagcattttttgtttctaaatatttgtttttttctgtcgcttttggtttcgcttgatg  18459200                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                 <---------ICU4                                     <                                              <---------ICU4                                        -                                             --------->ICU4                                        --                                             <---------YAB1                                        --                                      <------------CBF                                             <-                                   <------NtERF2--------->ICU4                                     <-                  --------->ZAT6  ------>NtERF2 <---------YAB1                                   ----                <-----------GT1  --------->DEAR3(1)                                             <----           <-----------TBP       --------->RAP2.6(2)                                            -----         <---------ANAC58        --------->RAP2.3(2)    --------->AHL20(2)                     ------         <---------ANAC58      <---------At4g35610  --------->YAB1   <---------AHL20(2)        ------         <---------ANAC46      --------->At4g35610 <---------YAB1    --------->AHL20(2)        <-----     <----------DOF2      --------->At4g35610<------ZmHOX2a(2)   ----------->TBP           <---------AHL20(2)  <---------ARR11(3)     --------->ANAC58   <---------ARR11(3) <---------AHL20(2)       ----------->GT1  --------->ARR11(3)     --------->ANAC58   --------->ARR11(3) --------->AHL20(2)      ----------->GT1   ccaagttctttgcttatataacaccataagctaagccgcccattgagatcattatcattttaaaattatatataaatttcttcagtagaatgttaaattt  18459300   <-----------GT1 -------->YAB1 --------HAHB4 --------ATHB1 ------->HAHB4 ---------ICU4 -------->ATHB51                                             --------->ARR11(3) ------->ICU4                                                <---------ARR11(3) ------->AHL20(2)                                            --------->GLK1(2)                     -- --------YAB1                   <---------TOE2(3)           --------->RVE1(1)                -------- --------ATHB51             <---------At4g35610      ----------->GT1                        --------- ----->YAB1                 <-------GAMYB         --------->ZAT2                      <---------SPL7< -----AHL20(2)             <-----------RAV1(1)    <---------At4g35610             --------->ANAC46 -- ---->AHL20(2)     <----------DOF2                <---------ZAT2             <---------AGP1<---------LBD16 --->AHL20(2)     <---------ANAC58                --------->At4g35610        <-----------ARR10     <- --->AHL20(1)     <---------ANAC58            <-----------TGA1               ------->TEIL  <--------- ----AHL20(2) <---------At4g35610             <-----------HVH21 <----------DOF2------>ZmHOX2a(2) ----   aataattacattgtttagatgcttttgttctgttgacgatttgtttctcgtcagcttgataaaaatcttttattccatggatctaagccgttcccaggga  18459400   <-----------GT1        --------->ALFIN1 ------->AHL20(2)     <---------ANAC58 ->LBD16              <---------ANAC58           <---------YAB1 >LBD16         <---------ANAC58               --------->YAB1                                  <----- ---------YAB1  <---------ANAC58            --------->WOX13(1)                          <---------At4g35610 ------->AHL20(1)    ------->TEIL       --------->YAB1                                  <---------ZAT2 --------AHL20(1) --------->ALFIN1     <---------ATHB12                                 --------->ZAT2 --RAV1(2)<---------AHL20(2)----------->HVH21 <---------ATHB12                          --------->At4g35610 ------>TaMYB80 <---------ANAC46     --------->WOX13(1)                   <-----------GT1      ------   atataatacgattttatggtgtgtacgtgtgtgacaaaacaatcatctatcatggttagactaagagttctaaattttacaaaaattcccagctcaattt  18459500                                                                                      --------->ATHB12                                  --------------->AGL15                         --------->AHL20(2)                              <---------ATHB12                              <---------AHL20(2)                              --------->ICU4                               --------->ARR11(3)                      --------->ZAT2                                       <---------AHL20(1)         --------->YAB1  --------->ANAC58                                  <---------ARR11(3)         <---------ICU4  --------->ANAC58                               <------ZmHOX2a(1)    --------->AHL20(2)--------->STY1(2)                      <---------ANAC46   <---------AHL20(2) ----AHL20(2)         <---------STY1(2)             <----------DOF2   <---------TOE1(3) --->AHL20(2)   --------->ZAT14--------->YAB1    <-----------GT1      <---------TOE2(3)   tttaaaaaaaatcataactatactagctcgcaataactataaatatcaatttcactttctattgtgtttattaaggatatatttatattgatttcatgtt  18459600                                                                           --------->ANAC58                                                                --------->ANAC58                                                                --------->ANAC46                                                                --------->ANAC58      --------->ANAC58                                                                --------->ANAC55(1)   --------->ANAC58                                                                --------->ANAC55(2)   --------->ANAC46                                                              <-----------GT1       --------->MYB52(1)                                                             <---------REM1(2)   ---------->DOF2                    <---------AHL20(2)                  <------MYB46(1)    --------->ANAC58                  <---------AHL20(2)                    <------MYB83       --------->ANAC46           ----------->GT1                             --------->MYB59   --------->ANAC58           <         <---------ANAC46                              <---------TOE2(3) --------->ANAC58    <-------         <---------ANAC58                         --------->AHL20(2)     --------->ANAC46   ---------         <---------ANAC58     ---------->DOF2     <---------AHL20(2)     <---------ALFIN1   <--------   atatgtgaagagcgtgttatatttttttttgaaaaagagagcatgttatagtttaattaggtttacacgttacacacacaccaaaaagacggaattaatt  18459700  Previous    Next  AGI:  At4g39780.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF060 (ERF060) [Arabidopsis Thaliana] (GB:O65665;GB:Q6J9S5); similar to AP2 domain-containing transcription factor [Arabidopsis thaliana] (TAIR:AT2G22200.1); similar to DREB2 [Glycine max] (GB:AAQ57226.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 18457951    to: 18459174    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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