Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <------MYB83                                                                                 <------MYB46(1)                                                                                <---------TOE1(2)                                                                          --------->DEAR3(1)                                                                         <---------HSFC1(2)                                                                         --------->DEAR3(2)                       --------->LBD16                                   <------------AtMYB77                   --------->GLK1(2)                                     --------->MYB46(3)                   <---------ARR14(2)                                    <---------HSFB2a(1)                   --------->ARR14(2)                                    --------->HSFC1(2)            <---------At4g35610                            <---------ARR14(2)   <---------DEAR3(1)            <---------ZAT2                                 --------->GLK1(2)    <---------AtMYB61            --------->At4g35610                            --------->ARR14(2)  <---------MYB52(1)        --------->ALFIN1                     --------->ANAC58    <---------MYB46(3) <---------ZAT18   --------->MYB52(1)<---------LBD16  --------->AtMYB61  <---------HSFC1(2)  <---------MYB46(3) ----MYB46(3)     <---------GLK1(1)  --------->MYB46(3)  --------->HSFC1(2)<-----------HVH21 -MYB46(3)  --------->ZAT2--------->ZAT14    --------->ANAC58 --------->ANAC46<-------GAMYB   ttgaatagcggtggagctgggattccggtaaactcttgaaccatcgctcggaagttggaagtatccgtcgttagaaccgtcgttggtgctcttcttgatg  18430500                                                                      --------->HSFB2a(1)                                                                      <---------HSFC1(2)                                                                    <------ZmHOX2a(1)                                                                  --------->ALFIN1                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                                --------->LBD16                                                               <---------ANAC58                                                               <---------ANAC58                                                               <---------ANAC46                                                               <---------DEAR3(1)                                                              <------NtERF2                                                            ----------->HVH21                                                            --------->ALFIN1                                                          <---------ANAC58                                                          <---------ANAC46                                                          <---------ANAC55(2)                   <---------ANAC58                       <---------ANAC58           <----------DOF2                                --------->ANAC55(2)      <----------DOF2                                     --------->TGA1a     ------>ZmHOX2a(2)                                    --------->bZIP60(1)     =================================HOX2a_HOX2a         <---------bZIP60(2)    <---------RVE1(1)                                     <---------TGA1a    ==================================HOX2a_HOX2a         <---------bZIP60(1)    <------ZmHOX2a(2)                                     --------->O2--------->HSFC1(2)   --------->AGP1  <---------ANAC58                       <---------O2<---------HSFB2a(1)   <---------ARR14(3)                                    ----------->bZIP910(1)   --------->ARR14(3)                                    ----------->STF1   <---------ARR14(2)                                   <---------TGA2(2)<-------TEIL   --------->ARR14(2)                                  ----------->HVH21<---------ARR14(2)         <-   <---------ARR11(3)          ------>ZmHOX2a(1)       ----------->TGA1<---------SPL7      <---------GLK1(1)   --------->ARR11(3) --------->ATHB12       <------ZmHOX2a(1)<---------LBD16<---------AtMYB61   <---   ctcgagatcttttctttgttttcttgattactcctatattgttagtaggagggagtgatgacgtggcggaggaggttcggaggtcgagttgagaaatcgg  18430600          <----------DOF2        <---------MYB46(3)        <------MYB46(1)        <------MYB83                          <------MYB46(1)     <-------GAMYB<--------P                  <---------ANAC46    --------->MYB111(2)                       <------MYB83    --------->MYB111(1)                      <---------MYB46(3)    <---------MYB46(3)    --------->ALFIN1   --------->MYB111(2)                                  <--    --------->MYB52(2)   ------->MYC2        --------->MYB46(2)                                  <---    <---------AtMYB61    <-------MYC2        <---------AtMYB61                            <-------GAMYB    --------->MYB55(2)   <-------MYC3        --------->MYB111(1)                          ===========   <--------P<---------LBD16 <---------MYB46(3)                                          <---------MYB46(3)  <---------MYB52(1)     ------->MYC3        --------->MYB55(2)          <---------YAB1 <---------AtMYB61 --------ANAC46--------->LBD16       <---------TOE2(3)                   <---------AtMYB61=========== --------HVH21<---------ANAC46      ---------->DOF2           <---------MYB46(3)       <------ZmHOX2a(1)   gtcgggttgttggtttacgggtaagaacgtgttgttgttaaagtagtttggtggtattagagagttgttgttgttatggtcgaaatggaggaggttgcga  18430700                                       <---------AtMYB61                                       --------->ALFIN1                                   <-------GAMYB             --------->ALFIN1     --------->MYB55(2)             <------NtERF2        --------->MYB111(2)                         ----------->GT1           <---------ANAC46       <---------MYB46(3)                          <---------ANAC58           --------->ALFIN1      <--------P                                   <---------ANAC46           =============================MYC_MYB                               <------NtERF2           =============================MYC_MYB                               <---------ANAC58           ===============================MYC_MYB                          <------NtERF2           <---------ANAC58     <-------GAMYB                              --------->ATERF1(1)           <---------ANAC58    <---------MYB46(3)                          ------>NtERF2           <---------bZIP60(2)--------->ALFIN1                            <---------RAP2.3(1)           <---------TGA1a   <-------MYC3                                 <---------RAP2.6(1)           --------->TGA1a   ------->MYC3                                 ------>NtERF2           --------->O2      <-------MYC2                                 <---------ATERF1(1)           <---------O2      <-------MYC4                                 <---------RRTF1(1)          ------>NtERF2      ------->PIF5                                 <---------DEAR4(2)          <------NtERF2      <-------PIF5                                --------->ANAC46         <---------RAP2.3(1) ------->MYC4                                <---------DEAR3(1)        <---------RRTF1(2)   ------->MYC2                                <---------RAP2.3(2)        <---------RAP2.6(2) ==============MYC_MYB                        <---------RRTF1(3)        <---------RAP2.3(3) ============MYC_MYB                          <---------RRTF1(2)        <---------RAP2.3(2) --------->O2                                 <---------RAP2.3(3)        <---------DEAR3(1)  <---------ANAC55(2)                         <---------LBD16        <---------ANAC46    <---------O2                  --------->ARR14(2) ------>NtERF2       <---------LBD16      ============MYC_MYB           <---------ARR14(2)<---------ANAC46   <-----------RAV1(1)      --------->TGA1a              <------NtERF2  --------->At4g35610 -------MYB46(3)            --------->ANAC55(2)         --------->LBD16<-----------RAV1(1) ------AtMYB61         ----------->HVH21  <---------AtMYB61           ------>ZmHOX2a(2) =====================================MYC_MYB         <---------LBD16<---------At4g35610     <<<<<<<< ====================MYC_MYB<---------TGA1a<---------MYB46(3)    <---------WOX13(1)  --------->YAB1   tggttttgttgcggcgtgggtatagatgacacgtggttgttgtggtggtcgaagaaggcggaaatggattgatctgcggcgcgtgaatcgtattcttctt  18430800                ------>NtERF2               --------->DEAR3(1)              --------->DEAR4(2)              --------->RAP2.3(1)             --------->ABI4(1)             ------>NtERF2            --------->ANAC46            --------->DEAR3(1)            --------->DREB2C(2)            ------->GAMYB            --------->AtMYB61            <---------ALFIN1           --------->ATERF1(1)           --------->DEAR3(2)           --------->DEAR4(2)           --------->MYB46(3)           <------NtERF2          ------>NtERF2          --------->ABI4(1)          <---------ATERF1(1)         --------->AtMYB61         --------->DEAR3(1)         <---------ALFIN1        --------->MYB46(3)       ------>NtERF2       --------->LBD16       <-----------HVH21       <---------ATERF1(1)                               --------->O2      --------->ANAC58                                   <---------ANAC55(2)                      ---      --------->ANAC46                                   <---------O2                           -----      --------->DEAR3(1)                        --------->SPL7                                  -----     <---------LBD16          --------->ANAC58--------->LBD16                                --------    <---------ATERF1(1)       --------->ANAC58<---------ZAT18    ----------->GT1             --------    ------>ZmHOX2a(1)       <---------ANAC58<---------LBD16----------->HVH21                ---------   <---------ALFIN1         <---------ANAC58--------------->AtSPL3     ---------->DOF2      --------- ------>ZmHOX2a(1)<----------DOF2          --------->MYB52(1)  ---------->DOF2              --------- <TBF1--------->ANAC58<---------YAB1  <---------YAB1     --------->ANAC55(2) <----------DOF2<--------   ctcctcctccgccaccgccgcttgaagattgcatgctactactattaccggactccatctcgtgacaaagaaaaaaagactttgacgagagaaaacgtaa  18430900   --------->ATHB12 ------>ARR11(3) ---->ANAC58                                                                                     <--- ---->ANAC58                                                                    --------->At5g28300-- ->TOE1(2)                                                                     ----------->GT1   <--- ->TOE2(2)                                                                    <---------YAB1   <----- >ANAC58                                                                    --------->YAB1     <----- >ANAC58                                                <------ZmHOX2a(1)  <---------YAB1      <----- -->GT1                                     *TSS      <---------TOE2(3)----------->GT1         <----- -ANAC55(2)         ----------->GT1    <---------At4g35610          --------->CCA1(2)          <-----   gaaattgatttagaggtgagaatggatacttgagtttagggagctattgtttgtttaaggagtttatgagatagggtatcatggtaaataagacatttgg  18431000                <--------ATHB1                <---------AHL20(2)                --------->AHL20(2)      <---------ARR11(3)    --------->ICU4    <---------YAB1  <---------bZIP60(1)                                                                        --------  --------->bZIP60(1)                                                                       ------>MYB83 ------ANAC58   --------->YAB1                                                              ------>MYB46(1) --------->HVH21<---------ICU4                                                            --------->AtMYB61 ------ANAC58   <---------AHL20(1)          ----------->GT1                            --------->AtMYB61 ----ANAC46    --------->ICU4             ----------->GT1                        --------->ZAT6 -MYB46(1)   --------->YAB1               <----------ID1             <----------DOF2  --------->MYB46(3) ----ANAC58 <---------AHL20(2)        ---------->DOF2     <------MYB46(1)     <---------ARR14(2) ----ANAC58<---------AHL20(2)       ----------->HVH21     ----------->GT1     --------->ARR14(2) -MYB83    --------->AHL20(2)     <---------ANAC46        <------MYB83      <---------MYB46(3)   tgtgacatgattttttaataattttgttttgtttttgtgtgaaagggagaaaaacagggaaggtgaaatcgcattaagtggttccactaccaccatccac  18431100                                                                                                    <                                      <---------TOE1(2)                                             <                                 ------->TEIL                                                      <-                           <-------TEIL                                                            --                      --------->AHL20(2)                                                    >>>>>>>>>ARR2                     <---------YAB1   <---------TOE2(3)                                    --------->ATHB12                    --------->AHL20(2)<---------TOE1(3)          <----------DOF2          <---------YAB1 ->MYB46(3)<---------CCA1(2)    <---------CCA1(2)            <-----------GT1            <----------DOF2   tattgtctactctatatcccaatattatatacatgtatctaaggtttagtttatattagatttattccttttggtgatagtcaaaattcactttgattgt  18431200                                                    <---------ANAC58                                                    <---------ANAC55(2)                                                    <---------ANAC46                                                    <---------ANAC55(1)                                                  <-----------GT1                                              <---------ARR11(3)           <---------At4g35610               <------ZmHOX2a(1)     <------MYB83                        <---------ZAT14                                   --------->LBD16     <------MYB46(1)                     --------->ZAT14                                   ------>ZmHOX2a(1) ---------RVE1(1)                    --------->AtMYB61             <---------YAB1    <---------DAG2 ---------CCA1(1)                    --------->ZAT6 <---------ANAC58--------->YAB1   <----------DOF2 --------ARR11(3)                    <---------ALFIN1        <---------ARR11(3)   <-----------GT1 <-- ------->ARR11(3)  <----------DOF2  --------->MYB46(3)--------->DOF5.7(2)      <----------DOF2    ---   agatatttggttcggctaatgctttgttttgtttctctaccactgcaggatgttacgtttacaaatcttatgatggtattacttttacttttcctgataa  18431300                                                                                                    <                                                                                               ------                                                                                          <---------ZAT14                                                                                          --------->ZAT14                                                                                          --------->ZAT18                                       --------->YAB1                                     <---------ZAT18                                 <-------TEIL                                           --------->REM1(2)                             <---------ARR14(2)                                       --------->LBD16                             --------->ARR14(2)                                      <---------ANAC46                  --------->ATHB12--------->YAB1         --------->YAB1              <---------ANAC55(1)        <----------DOF2      <---------KAN4(2)        ----------->GT1                <---------ANAC58        <---------DAG2      <---------CCA1(2)    --------->YAB1                      <---------ANAC58     <-----------GT1      <---------ANAC58      <---------ATHB12                   <---------At5g28300 -------------AtSPL8      <---------ANAC46      <---------ATHB51                  <-----------GT1 --- ------------>AtSPL8      <---------ANAC58    --------->WOX13(1)             <---------AHL20(2)------   atggtacttacttttcttcgtgatttgtgcgtatattcatatcaaaatcaattatgcgataaaaatgttagaacaagttttaattttccgtgtgcacaaa  18431400  Previous    Next  AGI:  At4g39720.1    Description:  VQ motif-containing protein. similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G65170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21164.1); contains InterPro domain VQ (InterPro:IPR008889) Range:  from: 18429886    to: 18430944    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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