Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ICU4        --------->YAB1                                                      ----------->GT1        <---------ICU4                                                  <---------TOE2(3)       <---------ATHB12                                          <----------DOF2     <-----------GT1  <---------ANAC58                       <---------ANAC58        <---------YAB1    <---------AHL20(2)<---------ANAC58                       <---------ANAC58       <-----------GT1 -ARR11(3)       <---------ARR14(2)             <----------DOF2---------->ID1      --------->YAB1  -- >ARR11(3)       --------->ARR14(2) <---------ICU4   <-----------GT1   ---------->DOF2<---------ICU4   aaatttttaatcatcttcatatttgcgttcttatctaattttgacatatacttttctacaatttcgtcttttttaaagatgtaaattatcattccacaga  18413400                    --------->YAB1              <---------TOE2(3)                                           --------->YAB1             --------->YAB1                                            --------->WOX13(1)           <---------YAB1                  <---------AHL20(1)         ------>ZmHOX2a(2)          --------->TOE2(3)      --------------->AtSPL8              <------ZmHOX2a(2)         --------->ATHB12        <---------------AtSPL8             <---------ARR11(3)         --------->YAB1          --------------->AtSPL3             --------->ARR11(3)         <---------ICU4   <---------ARR11(3)                        --------->AGP1        <---------ATHB12  --------->ARR11(3)   <-----------GT1      <---------AGP1   <---------MYB52(1)  --------->AHL20(2)  --------->AHL20(1)   ---------->DOF2  <-------GAMYB<---------YAB1    <---------------AtSPL3      --------->AtLEC2 ----------->GT1    ----------->GT1  ------->TEIL            --------->ANAC58             ----------- ------->MYB52(1) <---------WOX13(1) <-------TEIL            --------->ANAC58             -----------   ctaccgttaaatcattaatgaatgataaaatctaaaacgtacatatatattacttagcgaaccatgcaaagatctatcatatttttgtttatatgacgag  18413500                                           <------NtERF2--------->ANAC58                                          ------>NtERF2 --------->ANAC58                                         --------->RAP2.3(2)                                         --------->RAP2.6(2)                                         --------->RAP2.3(3)                                        --------->RAP2.3(1)                                        --------->ATERF1(1)                                        --------->DEAR3(2)                             --------->ANAC46                                        --------->ERF1---------->DOF2           --------------->AGL15                                       <---------ATERF1(1) ----------->RAV1(1)  <---------------AGL15                           <---------At4g35610   --------->DAG2               ------>MYB83                           ------>NtERF2--------->DEAR4(2)<----------ID1    --------->AtMYB61                         <---------RAP2.6(2)    ---------->DOF2          <-----------GT1 <---------AHL20(2) >TGA1                 <-----------RAV1(1)<---------RAP2.6(3)      ----------->GT1     --------->ANAC55(2) >HVH21        --------------------->WRI1--------->DEAR3(1)--------->RAP2.6(2)------>MYB46(1)   atgtgaatgtattggaccatagtttgtgccgctggtataagagccgcccttaaagcgaaagccacaaactagataaaacctccccctataagtaatttct  18413600               --------->YAB1               --------->AHL20(2)            --------->YAB1          <---------YAB1                   <---------ALFIN1        --------->ATHB51                  ------>MYB46(1)        <--------HAHB4                    ------>MYB83                                           ----        <---------ICU4                  ------->GAMYB                                        --------       <---------YAB1                   --------->DEAR3(1)                                   <-------       --------->ICU4                  --------->DEAR3(2)                                    --------     <---------ICU4                    --------->MYB46(3)                                    <-------     --------->YAB1                   --------->MYB52(1)                                     --------     -------->ATHB1                  --------->MYB52(1)                                      <-------     <--------HAHB4            --------->HSFB2a(2)                                     ----------->GT1    <---------ATHB12          <---------LBD16                         <---------------------WRI1 <---   ------->TEIL<---------AHL20(2)   --------->MYB46(3)       <---------ANAC55(2) ---------->DOF2<----   aaatgaatcattattaataatatgtgtaaatttgtggaacaaccgactccccatagtttaatcacctaagacatcaaggctatcaaagagagaaatatat  18413700         ------------>CBF         <------NtERF2        --------->RAP2.6(2)                                                          <---------ARR11(3)      --------->At4g35610                                                   --------->YAB1 ----->AHL20(2)                                                             --------->TOE1(3) ->ARR11(3)                                                                 --------->TOE2(3) --ARR11(3)                                                               --------->GLK1(2) ->AHL20(2)                                                               --------->ARR11(3) --AHL20(1)                      ----------->TBP              <-----------HVH21   ------->GAMYB ->AHL20(1)                      --------->AHL20(2)          --------->TOE1(3)   --------->MYB46(3) --AHL20(2)  <---------ATHB12  --------------->AGL15         --------->TOE2(3) <-----------GT1 ------AHL20(2)             --------->TOE2(3)    --------->HSFB2a(2)      <---------ARR11(3) -------- -----AHL20(2)     ----------->GT1               <---------HSFB2a(2) *TSS <-----------ARR10<---------YAB1   taattaagagcggcaatgaaatcgtagaaacctctataaataggcactcttctacaaactcaaccttcacttcgaaaatcttaaccacatcttattctta  18413800                                                                  --------->ANAC46                                                               ------>MYB46(1)                                                               -------->P                   --------->ZAT6                              ------>MYB83                  ------>MYB46(1)                         <---------ALFIN1                  -------->P                          --------->ANAC58                  ------>MYB83                        <---------ANAC46                 ----------->RAV1(1)                  <---------ANAC55(2)                --------->AtMYB61  <---------ANAC58   --------->ANAC58           --------->At4g35610-                ------->GAMYB      <---------ANAC46--------->ARR14(2)           ---------------------    <---------AHL20(2)    --------->DAG2         --------->ANAC58 --------->ANAC58                 --    --------->AHL20(2)   ---------->DOF2         --------->ANAC58 --------->ANAC58            ------- ->TOE2(3)     --------->MYB46(3)  <---------ANAC58<---------ARR14(2)  --------->AtLEC2 <------ZmHOX2a(1)   acacatttattttgttaaccaacactaaaaagtaatgtcgtccattggagcaagttacgcacacctacaagtcatgcagaagaagcagaaggagaagatg  18413900                                                                        --------->LBD16                                                                       <---------HSFB2a(2)                                                                       --------->HSFB2a(2)                                                                      <---------LBD16                                                                   <---------ANAC58                                                                   <---------RAP2.6(2)                                                                   <---------ANAC58       <----------                   <---------HSFB2a(1)                        <----------DOF2             --------->ARR11(3)        ---------->DOF2             <---------At4g35610    <---------ARR11(3)             <---------ARR11(3) ------------------------>ANAC81   ------->TEIL            --------->ARR11(3)  --------->GLK1(1) -------->DAG2     --------->HSFB2a(1)                   --------->HSFC1(2)    <---------GLK1(1) --->ANAC81        --------->HSFC1(2)                    <---------HSFC1(2)  <------ZmHOX2a(1)    --- -------->DOF2     <---------HSFC1(2)                <---------ETT(2) --------->SPL7   <---------AHL20(2) ----------------->ANAC81        ---------->DOF2   <-----------HVH21<---------SPL7     --------->AHL20(2)   aaaaagctagaaaaggagagaaacttcgaccacgatgaagctcatagactccctgtcgaaacatcttttgcgtccggaaggatttctaataaaatctatc  18414000                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                         --------->ARR14(3)                                                                         <---------ARR11(3)                                                                         <-----------ARR10                                                                         <---------ARR14(3)                                                                         --------->ARR11(3)    <---------MYB52(1)                           ---------->DOF2        <------ZmHOX2a(1) -ARR10                              ---------->DOF2                ---------->DOF2 --->ZmHOX2a(1)         <---------ZAT6--------->DAG2         --------->GLK1(2)          ---------->ARF1   cttctcgtttgtcttatgaacaagtagagttcaaatcacaaaagtgaagttcaaagtaatgaaattcttgaaaaggatcttcagagccttctctcccaag  18414100                                                       --------->ARR11(3)                                                       ------->TEIL                                                       <---------ARR11(1)                             ------->TEIL              <-----------ARR10                          <---------ANAC55(2)          --------->ARR14(2)                       <----                <---------ANAC46                       <---------ARR14(2)             --------->ZAT18                <---------ANAC58                      <---------ARR14(1)              --------->ZAT14                <---------ANAC58                      <---------CCA1(2)               <---------ZAT18                <---------AtLEC2 ------->TEIL       --------->ANAC55(2)          ---------->DOF2<----      ------>ZmHOX2a(1)   <---------YAB1            <---------ANAC55(2)---------->ID1 <---------ZAT14      <----------DOF2  --------->ICU4    <---------bZIP60(2)       <----------DOF2  <---------------AtSPL8   ---------->ID1   --------->AHL20(2)   <---------ANAC46     ---------->ID1 <---------ANAC46   <----   tatttgtcctttgtgtttgcatgtaattatgtatgtatgtgtgatgtgtctaaaacgtatcttggtcgtctttgtagttttgtgaaagtgtacaatttgt  18414200                                                                                                <----                                                                                                <----                                                                       --------->DAG2           -----                                        --------->ANAC46           ------>ZmHOX2a(2)           ------                          --------->KAN4(2)                      <---------ARR11(3)          >>>>>>>>   <---------TOE2(3)  ----------->GT1   --------->ANAC58         --------->ARR11(3)          >>>>>>>> -----ANAC46         --------->DAG2     --------->ANAC58     --------->ANAC55(2)      --------->CCA1(2) -----ANAC58  <---------ZAT6          <---------ALFIN1  ----------->HVH21            --------->ARR14(2) -----ANAC58  ----------->GT1    ----------->HVH21 <---------TOE1(2)  ---------->DOF2<---------ARR11(3)   gtgtttatgttatcaagtgttaaaaggttattccattgacacacgcccattactaggtttgacacatgatctaaaagtaagttgcaagatttgaaatttg  18414300  Previous    Next  AGI:  At4g39675.1    Description:  unknown protein Range:  from: 18413769    to: 18414234    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g39680.1    Description:  SAP domain-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26630.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71797.1); contains InterPro domain DNA-binding SAP; (InterPro:IPR003034) Range:  from: 18414300    to: 18417524    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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