Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ARR14(2)                                                                  <---------ARR14(2)                -                                                                  <---------TCP20                  <-                                                              ------>MYB83                         --                                                              ------>MYB46(1)                    ----                                                             --------->MYB52(1)                ------                                                            --------->MYB46(3)                 ------                                                            --------->AtMYB61                 -------    <------ZmHOX2a(1)                                      --------->MYB46(3)      --------->ARR11(3)  --------->LBD16      --------->HSFC1(2)             <---------ICU4               <---------ARR11(3) <---------LBD16       --------->HSFB2a(1)            --------->YAB1       --------->GLK1(2) -------- ->DREB2C(2)           <---------HSFB2a(1)           --------->ICU4       <---------ARR14(2)--------- >DEAR3(2)             <---------HSFC1(2)         <------ZmHOX2a(1)       <---------GLK1(2) ---------   aatccaggatagagactttcgaagaaggttccctatcgaagccgagagggcaggaatcatcaccaacggttccaccgattctgtagatattagaaccaac  18388300        <-------TEIL      <---------GLK1(2)      --------->ARR14(2)      <---------ARR14(2)    ----------->ARR10 <------NtERF2 ----->NtERF2 --------DEAR3(1) ------->DEAR3(1)               <---------LBD16 --->GAMYB                 <---------ARR14(2) >MYB83--------->CCA1(2)   --------->ARR14(2) >MYB46(1)                 --------->ARR11(3)                     --------->MYB52(1) -->MYB52(1)              <------ZmHOX2a(1)                     <---------ANAC58 ->AtMYB61        <---------ANAC58                              <---------ANAC58     <---------AtMYB61 >DEAR3(2)        <---------ANAC46                           ---------->ID1    <---------TOE1(3)----- >MYB46(3)        <---------ANAC58                          <-----------HVH21  <---------TOE2(3)<----   ggcgacgagattcgacgatagcgtaagaggatactggggagatggaatttggagaaaaaccttgtcgcttacggttcgattagggttttggtagagagtg  18388400                                                                               ----------->GT1                               --------->ANAC58                              <---------ZAT14   --------->ALFIN1            --------->ANAC58         --------->SPL7      --------->ALFIN1 ---->ZAT18       ---------->DOF2                     <---------SPL7   <------ZmHOX2a(2)            - -----ZAT14     --------->ETT(2)                    <---------------AtSPL3 >>>>>>>>>TAC1          ---   aaccagtgtgtgttattgtcgaaagggaagcgtaagcatagatagagacacttctcggtacggtttaagagagatcgagtgttgtaaatctctggtgaag  18388500                          --------->ANAC58                          <---------TGA1a                          =================================================bZIP_DOF                          --------->O2                          --------->ANAC46                                                <------ZmHOX2a(1)            <---------ARR11(3)                                                        --------->ICU4           <---------GLK1(1)----------->HVH21                                    --------->ANAC46        ------>ZmHOX2a(2) <---------O2----------->GT1           ---------->DOF2  --------->ANAC58 -------->ICU4            --------->ANAC58         --------->HSFB2a(2)           --------->ANAC58 ------>MYB52(1)          --------->TGA1a          <---------HSFB2a(2)       --------->YAB1 ---------   taacgatggatcgaaatctcttggagacacgagacagagcgggataatacattctagagacacgggcaaagcagttcaataacaagtcattaggaagtga  18388600                                                                                         <---------HSFB2a(2)                                                                                        ------>ZmHOX2a(2)                                                                                       --------->CCA1(2)                                                                                      --------->ARR14(2)                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                      <---------ARR14(3)                                                                                      --------->GLK1(2)                                                                                      <---------AGP1                                                                                      --------->AGP1                                                                                  <------NtERF2                                                                                <---------ANAC46                                                                               <---------LBD16                                                                               --------->At4g35610                                                                               <---------At4g35610                                                                               <------NtERF2                                                                               --------->RAP2.3(1)                                                                              <---------RAP2.6(1)                                                                              <---------ORA47(2)                                                                             <---------DEAR3(1)                                                                             --------->ATERF1(2)                                                                             <---------RAP2.6(2)                       <---------LBD16                                       <---------DREB2C(2)                    ----------->HVH21                                 <---------YAB1  <---------ARR14(2)                   <-----------TGA1                                   <---------ATHB51--------->ARR14(3)                   <-----------HVH21                           <----------DOF2<---------RRTF1(1)                  <---------O2                                ------>ZmHOX2a(2)--------->ATERF1(1)                  --------->O2                              <---------ARR11(3)<---------ERF1                  --------->bZIP60(1)                       <---------ARR14(2)<---------RAP2.3(1)                  <---------TGA1a                           --------->ARR14(2)<---------ATERF1(1)                  --------->TGA1a                           <-----------ARR10<---------RAP2.3(3)          <---------DEAR3(2)       --------->ATERF1(1)      --------->ARR11(3)------>NtERF2          <------MYB46(1)        <---------ANAC46           <---------AGP1   <---------RAP2.3(2)          <---------MYB46(3)     <---------ANAC58          <---------CCA1(2) <---------ATERF1(2)          <------MYB83 --------->At4g35610                <---------MYB46(3) <---------ANAC46         <---------AtMYB61       <---------ANAC58        --------->ALFIN1    <---------RRTF1(2)         --------->MYB59 --------->LBD16                --------->At5g28300  <---------RRTF1(3)        <--------P--------->ANAC46<---------ATERF1(1)  <---------ANAC46--------->ATHB12<------ZmHOX2a(2)     <---------TOE2(3) <---------At4g35610            <---------DEAR3(1)    <---------LBD16    ------ -->GT1 ====================MYC_MYB<------NtERF2     <---------LBD16  --------->ICU4----------->ARR10   atcgatcgaggttggttctctcgtcaccggagatggcgtctccttgtttttcttacgcggtggatctttgcgattattggcggcggaagatctggatgtg  18388700                                                                                                   --                                                                                               ------                                                                          <----------DOF2  --------->GLK1(2)                                                                         --------------->AGL15<------                                                                         <---------------AGL15<------                              <---------ARR14(2)                        <-----------------AGL2-------                          *TSS--------->ARR14(2)                 --------->MYB46(3)       <---------GLK1(2)                         --------->ANAC58                   --------->ANAC58             <---------At4g35610 --------->ARR11(3)      --------->ANAC58                   --------->ANAC46   <---------TOE2(3)  --- --->ALFIN1   --------->AHL20(2)          ---------->DOF2   --------->ANAC58   <---------TOE1(3)  <--   gaagacattgggaacataaattttctgaagcaaattcgctagcgaaaagaaaacaacttatcaaggaacaaacttccttttagggtttttcagattccag  18388800                   <---------ANAC58                   <---------ANAC46           --------->DOF5.7(2)         --------->bZIP60(2)         --------->ANAC58         --------->ANAC58         --------->ANAC55(1)         --------->ANAC55(2)         --------->ANAC46         <---------ANAC55(2)    ----------->HVH21   --------->TOE1(1)     <------ZmHOX2a(1) ------->ARR11(3)  <---------ANAC58 --->LBD16 <---------MYB52(1)>>>>>>>>>MYB2                                                   <------ZmHOX2a(1) ---HSFC1(1)      <---------LBD16      <---------YAB1                                  <---------ZAT14 ---HSFB2a(2)--------->ARR11(3)    --------->YAB1                                 <---------MYB52(1) -->HSFB2a(2)<---------ARR11(3)    --------->AHL20(2)       <---------ARR11(3)   <----------DOF2 ------>GLK1(1)<---------ANAC58   <---------ATHB12          --------->ARR11(3)  <----------DOF2     - -------GLK1(1)<---------ANAC58   <---------ATHB51      ---------->DOF2  --------->ATHB12   ---------   aaatctcggacacgttatcttgcgcgaggaaaaccaataatatgttagcccatgggccaaaagataccatgtgaattatgggcctttagtttacaggaca  18388900                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                         ---------->DOF2                                                                                       --------->ANAC58                  --------->YAB1                                                       --------->ANAC58                 <---------YAB1                                              --------->ZAT18        <---------ANAC58                                                     --------->ZAT14     --------->ANAC58                                                        <---------ZAT14     --------->ANAC58                 <---------ANAC58         --------->TOE2(3)--------->ANAC46 ------>TEIL    --------->AHL20(2)    <---------ANAC58        <---------ANAC55(2) --------->ZAT14 >ANAC46<---------ANAC58        <---------MYB52(1)           <-------TEIL   <<<<<<<<<<<<<<<<<LFY    <   tgaacataagccttgccttataatacaaacctctgttttttcttgcaactaggtcattttagttacataaatgtgaatgtacactggacaaacaagcact  18389000             ---------->DOF2         --------->AtLEC2       <---------ANAC58       <---------ANAC58                                                        ---------->DOF2     ------->TEIL                                                     --------->ANAC58     --------->ARR11(3)                  ---------->DOF2              --------->ANAC58          -----    <---------CCA1(2)                  --------->TOE2(3)          --------->AtLEC2            <------ ----------DOF2----------->GT1       ------->TEIL                 --------->ANAC46   <---------ZAT6   aactttgtatcttgcaaaagttaattctcatgagtcatgaacctaaagagaaccgtagtcttccttctatgcaacccatacaaaagagtgttcaaataca  18389100                       <---------------AGL15                       --------------->AGL15            --------->WOX13(1)     <-----------HVH21----------------->AGL3          --------->YAB1 ---->ARR11(3)  <---------At5g28300              <---------ATHB12 -TEIL  --------->WOX13(1)     --------->At4g35610  ------->TEIL  --------->YAB1           <---------CCA1(2)   tcttcacagtcagtcagtcactgtcccaaaataagctaacacattatacaaatgaatcagaaataccatcagaacaaaaactacaatacccgcttatctc  18389200  Previous    Next  AGI:  At4g39590.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At4g39590 [Arabidopsis Thaliana] (GB:Q1PE10;GB:Q8LGB0;GB:Q9SV99); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G61540.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR0 Range:  from: 18387325    to: 18388726    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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