Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->ANAC46      <---------ZAT14                                                              --------->ANAC46      <---------ZAT18                                                              --------->ANAC58      --------->ZAT14                                                              <---------ANAC55(2) --------->At4g35610                                                            <---------ARR14(2) <---------At4g35610                                                            --------->ARR14(2) --------->ZAT2                  --------->At4g35610                    --------->YAB1    --------->AHL20(2) <---------ZAT2               --------->HSFC1(2)                    <----------DOF2--------->ANAC58 --AHL20(2)                   <---------HSFC1(2)             <-------TEIL    --------->MYB46(3)  <---   ttgagctgtgaactctgcattaccctcttcgaaacatctgcgaaaacaatagcatttatcaaatacatctcttttcataaccaatacgcgaaaaaaattc  18358500                                                    --------->ARR11(3)                                                    <---------ARR11(3)                                           --------->At4g35610                                           <---------At4g35610      --------->YAB1                      <---------DEAR3(1)                                       --      <---------ICU4                     --------->ZAT18                                           --     <---------ATHB51                   <-----------HVH21         ------->GAMYB                  ----     --------->ICU4            ----------------->AGL1          --------->MYB52(1)            --------     <---------ATHB12         <---------At5g28300 --------->ARR11(3)                         -------- ------At5g28300             <-----------GT1      <---------ARR11(3)            <------ZmHOX2a(1)<---   acagtcaataatgaagacagacagagagaatttaccatgagaggtcgctgaagagctcttcacatcaacggagagagtaagaggagccatgagaaacgcc  18358600     ------>MYB83     ------>MYB46(1)   <---------MYB59                                                                             ------ ------->WRKY12------>MYB83                              --------->ANAC58                 --------->ANAC58 --------->HVH21                                         --------->ANAC58                 --------->ANAC58 ----->At4g35610        <-----------GT1    --------->ANAC46                           ------>MYB83 ->ANAC58      ------>MYB46(1)             ----------->GT1                --------->GLK1(1)    ------ ->ANAC58 <-----------GT1  <---------ATHB12--------->ANAC58               <---------GLK1(1)  -------- ------At4g35610 <---------ATHB12          --------->ANAC58    --------->MYB52(1)     ------>MYB46(1)   tctgacctaatttcaccaaatcaatttcactcatttttaagcgaaacgcaaaattcaccaagaaaaaacagagaagaaatcccaaaccaaacaagtaaag  18358700                                                    <---------------AtSPL3                                                    <---------------AtSPL8       ----------->RAV1(1)                          --------->DAG2    --------->ANAC58                        <-------TEIL<-------TEIL    --------->ANAC58                       --------->CCA1(2)            --------->ALFIN1 --->ANAC58                    ---------->DOF2      --------------->AtSPL8 --->ANAC58                   --------->ANAC46----------->GT1         <---------ANAC58           ---- -->DOF2        --------->ANAC46   <---------ANAC46---------->DOF2    <---------ANAC58      <------ZmHOX2a(1)   caagagaagcaacaatatacaaaacatcatacacaaagcgtatagatacagaaaaaagtacataaatgtagtgagtgtggaattagagattacaggaaga  18358800              ---------->DOF2            --------->ANAC58            --------->ANAC46                                                    --------->ATHB12         --------->ZAT14                                                       --------->ICU4         --------->ZAT18                                --------->HSFB2a(2)   <---------WOX13(1)        --------->ALFIN1                                <---------HSFB2a(2) <------ZmHOX2a(1)       <---------------AtSPL3                  <---------DEAR3(1)    --------->LBD16      <---------ANAC46            ----------------------->TaNAC69(2)--------->ANAC46   *TSS        -- ------>DOF2--------->ANAC58    --------->ARR11(3)<-----------ARR10<---------LBD16   ---------->DOF2   gaagcgcgaagtgtacgaaagagagagatagagagacctcgacttctcttcggctcttcccaaagtttctccgcaagaggattgattaaaagcttcttct  18358900                                                                                  ---------->DOF2                                                                               <---------MYB59                                                                               --------->TOE1(3)                                                                        --------->MYB46(2)                                                                        <---------MYB46(3)                                                    <---------ANAC46    --------->MYB52(2)                    <---------ALFIN1       <---------CCA1(2)          <---------MYB52(1)        <----                 <---------ETT(1)        <---------ANAC55(2) <-----------GT1   --------->TOE2(3)-----             <---------ARR14(2)    ---------->DOF2  <---------ANAC58 --------->TOE2(3)    <---------TOE2(3) ------->ZAT14  --------->DEAR3(2)<---------AHL20(2)<---------ANAC58--------->ANAC46<----------ID1   gtttactaatgggcctataccgacacactagcctattaaaagcccgtatcagtttcttgtaatgtactatacgttagttaacctaaaagacaaaggtttt  18359000                                                         <---------ANAC58                                                         <---------ANAC58                          <-                                                       <-----------GT1                             <-                                                   --------->AHL20(1)                             ---                                              --------->AHL20(2)                                <----                                         <---------AHL20(1)                                    ------                                         --------->AHL20(2)                                    <-----                                         --------->AHL20(1)                                    ------       ----------->GT1                   <---------AHL20(2)                     <-------TEIL   ------  <---------AHL20(2)                    --------->AHL20(2)              --------->REM1(2)      ------ --------->YAB1               <---------bZIP60(1)  --------->AHL20(2)<---------ANAC46          ------ -----ANAC46                  --------->bZIP60(1)  <---------AHL20(2)<---------ANAC58       --------- ------>GT1               <---------TOE2(3)   <---------AHL20(2)     <---------ANAC58       ---------   gtataaaaatgggaaatttgttcttgttaatgaagtcacaaattttatttaaattttttacttgtggagtctcgtgtatacatacagttgtcaatgttag  18359100 <--------P -----MYB46(1) -----MYB83 ------>MYB111(1) ---GAMYB                                         --------->ARR11(3) --->MYB52(2)                          <---------AHL20(2) ----MYB46(3)                         <---------AHL20(2)                                     <------- --->MYB46(2)                     <---------RVE1(1)                                        <--------- --->MYB111(1)                    <---------CCA1(1)                         --------->YAB1 ========== --->MYB55(2)       ----------->GT1   --------->AHL20(2)       <---------AHL20(2)       <-----------GT1 --->MYB111(2)    ------->MYC3   --------->ARR11(3)           --------->AHL20(2)       <---------AHL20(1) >YAB1  <---------AtLEC2         <---------ARR11(3)<---------YAB1    ================================ >TOE2(3)         <-------MYC3  <<<<<<<<<RAP2.2   <---------ARR11(3) <----------DOF2   <---------ARR11(3)   ttggtagtttgcataaaaaacgtggtaagaatttagatattttaatttggaagataattatctattaaatacttttagtaataagacaatatactttaca  18359200              <---------ICU4              --------->YAB1             --------->AHL20(2)   ------->MYC3   ------->MYC2   <-------MYC3   <-------MYC2  --------->ANAC58  <---------TGA1a--------->AHL20(2)  <---------ANAC55(2)  --------->ANAC55(2)  --------->TGA1a<---------AHL20(2)                                                  <---------ANAC58  --------->ANAC46                                                                   ----------->RAV1(2)  --------->ANAC58<---------AHL20(2)                                      <------ZmHOX2a(2)  --------->O2<--------HAHB4             <---------ICU4                  <---------ARR11(3)  <---------O2--------->ATHB51           -------->ATHB1     <---------MYB59----------->GT1 ----GT1     --------->ICU4              --------->ATHB12 <-----------ARR10------>ZmHOX2a(2) -DOF2  --------->YAB1                  <---------YAB1    <---------ARR11(3)         <---------ANAC58 ===========bZIP_DOF                   --------->GLK1(2)  --------->ARR11(3)       <-----------GT1 ===========bZIP_DOF      --------->At4g35610--------->AHL20(2)          --------->ARR11(3)  <-------   ttacacgtgatcagaataattaaatagcatcagaaattcagaatcattgaaataagtcaatatctaacttgaagagatcgtcaaattacctgcttctttt  18359300              <------MYB83              <------MYB46(1)          --------->ATHB12                      <------MYB83          --------->YAB1                        <---------MYB46(3)       <---------ICU4                           <------MYB46(1)       --------->YAB1                          --------->MYB55(2)      <---------YAB1                           <---------AtMYB61      --------->ICU4                           <---------MYB46(3)    <---------ICU4                            <---------MYB52(1)           ----------->HVH21    --------->YAB1                          <---------ZAT6                --------->SPL7    --------->ATHB12                        <-----------RAV1(1)        --------->YAB1   --------->ICU4                 <---------AHL20(2)                  <<<<<<<<<ARR1     <---------At4g35610   <---------YAB1                 --------->AHL20(1)                  <<<<<<<<<ARR2     --------->At4g35610 --------->YAB1                   --------->AHL20(2)               --------->MYB46(3)  ----------->RAV1(1) ---DOF2 <---------YAB1          --------->AHL20(2)           ------->TEIL<---------TOE1(2)   caagaatgattatgataggttttttttctgacaaaaaaaattgctactgttggtggaagagatgtatcaacaatcgtatgaccgatagacagcagaaaaa  18359400  Previous    Next  AGI:  At4g39460.1    Description:  SAMC1/SAMT1 (S-ADENOSYLMETHIONINE CARRIER 1); S-adenosylmethionine transmembrane transporter/ binding. similar to SAMC2 (S-adenosylmethionine carrier 2), binding [Arabidopsis thaliana] (TAIR:AT1G34065.1); similar to S-adenosylmethionine transporter [Capsicum annuum] (GB:CAF25317.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 18355987    to: 18358887    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g39470.1    Description:  chloroplast lumen common family protein. similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT3G18420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71747.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 18359367    to: 18361164    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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