Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------AHL20(2)                                                              <---------AHL20(2)                                                           --------->ATHB12                                                           <---------ICU4                                                           -------->HAHB4                                                           --------->YAB1                                          <---------ANAC55(2) --------->AHL20(2)            -------->P                                          --------->ANAC55(2)<---------WOX13(1)           <---------MYB111(1)                                    --------->AHL20(2)    <---------YAB1            <-----------GT1      ----------->GT1           <---------AHL20(2)        --------->ICU4         --------->ANAC58 ---->GT1           <----------DOF2 <---------AHL20(2)  <---------ICU4           --------->ANAC58 ->DAG2      <-----------GT1   <---------AHL20(1)       --------->YAB1       <---------ANAC58 ->DOF2      --------->CCA1(2) --------->AHL20(1)      --------->ICU4        <---------ANAC58   aactagtagggaaatatacgagcttttggtttatatatttaaatacttattttgaaaataatgattaattttagtattttcgtaagtaactacttaccat  18334400                                                                               <---------MYB52(1)                                                                         ===========================HOX2a_HOX2a                                                                         ------>ZmHOX2a(2)                                             <---------YAB1            <---------ARR11(3)                                           --------->YAB1            --------->ICU4          <------ZmHOX2a(1)                                          --------->ICU4             <---------YAB1         <--------                                   --------->SPL7                  --------->YAB1   <----------DOF2                                 <-----------HVH21                 <---------ICU4  <---------ANAC58             <----------DOF2     <---------MYB52(1)      <---------TOE2(3)     <----------DOF2  -----  ----------->HVH21          --------->MYB52(1)  ------>ZmHOX2a(2)--------->ICU4   <---------ANAC58   ggatttgacaggggtctttgggatgaaatactaccggtaagacgatgatgatcgagattaagaaaaccatcatgatcgtccctttgctttgatgaggaca  18334500                         <------MYB46(1)                         <------MYB83                 --------->LBD16                <---------LBD16                --------->HSFB2a(2)                                                <---------TOE2(3)                <---------HSFB2a(2)                <------ZmHOX2a(1)            <---------YAB1               <---------ANAC46                  <---------TOE2(3)            --------->YAB1         <---------TOE1(3)                <---------GLK1(2)                  <---------YAB1 --ID1   <---------TOE2(3)           --------->ATHB12                   ----------->GT1  <------ZmHOX2a(1) ----->DOF2    <---------LBD16     <---------WOX13(1)       <---------YAB1   --------->ICU4   aagacgagattagggtttcggggagattggtcatgagattgatggaatcttgaggatgacttatgaatgaagacgggttattatgaaggaaggagtttag  18334600                                                                            ----------->HVH21                                                                       --------->ALFIN1                                                                    --------->DAG2          --------->ANAC58                      <----------ID1    --------->CCA1(2)           >>>>>>>          --------->ANAC58         <------ZmHOX2a(1)             --------->ARR11(3)  ---------->DOF2   ggagttatgaccaagaaatggagacacaagagaagaaggagaagacgaagacgacgaagatgatgaagataaggtgctgtgactagggaaagagaagaag  18334700           ----------->GT1           <------MYB46(1)           <------MYB83          --------->MYB111(1)          --------->MYB46(2)                                                --------->MYB46(3)          <---------MYB46(3)                                               --------->ANAC58          --------->MYB111(2)                                           <---------ZAT18         <--------P                                            <---------TOE1(2)         <---------MYB55(1)                                    <---------TOE2(2)      ---------->DOF2        <-------GAMYB                     <-------TEIL       <---------ANAC58     --------->ANAC58       <---------MYB46(3)             <---------YAB1         <---------ANAC58     --------->ANAC58 >>TBF1--------->ATHB12     ----------->HVH21            --------->KAN4(2) --------->ANAC58  <-------   aaacctagatggttggtattaatagggtttatgacggtttgtgattcatcaaacaagcttattccttggtttatcgcacccatctcgcaaaagcttgacg  18334800         <---------ANAC58         <---------ANAC46                               <---------YAB1         <---------ANAC58                          <---------RVE1(1)                       <---------ATHB12     <------------CBF                              <---------CCA1(1)                   ------------>CBF --WRKY18(1)                   ---------->DOF2    <---------ARR11(3) <-------GAMYB------------>CBF   aaggtgagattgtgtgtgtgagacagtgagagagaaagtttttgttttgctggatattttgtttgattttgggttgagagttgagacaatccaatccatc  18334900                                                    --------->TCP15(1)                                                    <---------PCF2                                                    --------->TCP20                                                   <------MYB46(1)                                                   <------MYB83                                                  <---------MYB46(3)                                                 --------->ALFIN1                                                <-------PIF5                                                <---------MYB52(1)                                                ------->PIF5                                               <---------ZAT2                                               --------->ZAT2                                               <---------At4g35610                           <-------                         <-----------RAV1(1) <-----------RAV1(2)                             --------                         ================================RAV     <------MYB83  --------->ARR14(2)                        <---------TOE2(3)   <-------TEIL        <---------AtMYB61        ----------->GT1                     --------->AHL20(2)    --------->ALFIN1    <---------WOX13(1) <-----------GT1                     <---------AHL20(2) --------->DAG2   <------------CBF      <---------ARR11(3)                  <---------AHL20(1)  ---------->DOF2 ------------>CBF         --------->ARR11(3)                  --------->AHL20(1)--------->YAB1--------->MYB59<------MYB46(1)--------->CCA1(2)               --------->AHL20(2)  <---------YAB1<--------P   <------------CBF <---------ARR14(2)   catgtgagtgtttcgattaatatataaatgttggataatgaaaaggtgcaggtgggtccaattggattggttttgttcgaagatttacatgtgattaaaa  18335000                                    --------->YAB1                                   <---------YAB1                                   <---------AHL20(2)                           ---------->DOF2                                  --------->AHL20(1)                           <XXXXXXXXXXXXXXXXXXXXMIR866-5P                                  <---------AHL20(1)                         --------->YAB1         -                                  --------->AHL20(2)               <---------MYB46(3)             --- --AHL20(2)         ----------->RAV1(2)--------->YAB1              --------->MYB52(2)         ------- ->AHL20(2)--------------->AtSPL8--------->YAB1      <----------DOF2<-------GAMYB            <-------   tgctcatatttgttttgtactcgcctgattttgaaatataatagtgatgaggggtctttttaaaaatgtttgttgatattaataaagtctgtattttggt  18335100                          <------------------------ANAC81                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                      <---------AHL20(2)                     xxxxxxxxxxxxxxxx>smallRNA(i)                    <---------RVE1(1) -------->YAB1     <---------GLK1(2)      <----------DOF2 ------>AHL20(2)   <---------ARR11(3)   ---------->ID1                     <------ZmHOX2a(2) ---->GT1          --------->ARR11(3)  <-----------GT1                   <------ZmHOX2a(1) --TOE2(3)<---------TOE2(3)<------------------------ANAC81         <---------YAB1  ---------->DOF2<--   taaaataactatgaggttttagatttttttttttttttttttttcttttttttttggaaatttagaacgattataggatcaagcgaaaagacttacagtt  18335200                           --------->TOE2(3)                          <---------ANAC55(2)                          --------->ANAC58                          ----------->GT1  <-------GAMYB                          --------->ANAC55(1)                          --------->ANAC55(2)     ----------->GT1                          --------->ANAC58<---------MYB46(3)               --------->ZAT14            --------->MYB46(2)          --------->At4g35610         --------->MYB59      <---------ICU4     <---------AtMYB61    --------->ANAC46--------->MYB111(2)                  <---------AtLEC2 -------ANAC46 <---------ZAT14        <---------TOE2(3) --------->YAB1    ------>ZmHOX2a(2)  --------   ttgtgttttggtagcagtatacaacaatacgtaaaatttttaggtagttgaaatgttataacaatgactaatttgatctatgcatgaaaattattcatta  18335300  Previous    Next  AGI:  At4g39410.1    Description:  WRKY13 (WRKY DNA-binding protein 13); transcription factor. Identical to Probable WRKY transcription factor 13 (WRKY13) [Arabidopsis Thaliana] (GB:Q9SVB7); similar to WRKY family transcription factor [Arabidopsis thaliana] (TAIR:AT2G44745.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71739.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 18332872    to: 18334783    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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