Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------WOX13(1)                   --------->AHL20(2)                   <---------AHL20(2)                  --------->AHL20(2)                                      ---------->DOF2 <-----------GT1  <---------ATHB12                   ------->TEIL   --------->AHL20(2) ----->GT1      --------->YAB1             ----------->GT1  ----------->RAV1(2)            --------->YAB1   tttaaacaattttgctactaataaataagagattgatatataacatggagaaatggaccttcgcctgaaattaaaacaaagtctgggtttcattcatgtt  18329300                                                          <-------PIF5                                                          ------->PIF5                                                          <-------MYC4                                                          <-------PIF4                                                          ------->MYC2                                                          ------->MYC4                                                          <-------MYC2                                                          <-------MYC3                                                          ------->PIF4                                                          ------->MYC3                                                         =======================bZIP_DOF                                                         <---------ANAC58                                                         <---------ANAC58                                                         --------->ANAC55(2)                                                         <---------ANAC55(2)                                                         <---------O2                                                        ------------>OsbHLH66                                                       <---------ALFIN1                                                      ----------->HVH21                                                --------->ALFIN1                                               <-------MYC3                             --------->WRKY38(1)                                               ------->MYC3                             --------->ZAT18                       --------->AtMYB61       ------->MYC2                          --------->O2                 --------->REM1(1)             <-------MYC2                          <---------ANAC46               ----------->RAV1(1)            <---------ANAC58                       <---------O2               ------>NtERF2                  <---------ANAC58                   --------->At4g35610              --------->DEAR3(1)              <---------ANAC46                   <---------ZAT2            ------>NtERF2                 <---------MYB52(2)                     <---------At4g35610           --------->ANAC46              --------->ANAC58<---------TGA1a         --------->ZAT2          <---------ZAT18                --------->ANAC58--------->O2<----------DOF2<-------TEIL          --------->ZAT14                --------->ANAC46--------->TGA1a      <---------At4g35610   tcagtgagacactgcgccaacatcaccacaacaagtcttacacaaggaacgtgtgcctcacgtgctcttctctttctctctgcagctacgtggactgtct  18329400                                 <----------DOF2                                <---------ANAC58                                <---------ANAC58                            <---------ANAC58                     <---------ANAC46                     <---------ANAC55(1)                                  <-----------GT1                     <---------ANAC58                                <---------AHL20(2)                  <---------GLK1(1)                                  --------->AHL20(2)                  --------->GLK1(1)                             <---------YAB1                 <---------ARR14(2)                          <---------YAB1  <----------DOF2                 --------->ARR14(2)               <----------DOF2--------->AHL20(2)             <---------LBD16<---------ANAC58      --------->TOE2(3) <---------AHL20(2)          <----------DOF2  --------->MYB52(2)   <------------------------ANAC81    --------->ZAT6     <---------ALFIN1<---------ANAC58  <---------GLK1(2) <----------DOF2 <<<<<<<<<<GT-3b   tcgctcccctcgctcttcggatttcgtgttccttgctttcaaattctttcttctttaatctttttgattatttatttttcttttctcactactacccaaa  18329500                                                                                               <-----                                     ---------->DOF2                                     <---------AHL20(2)                                  --------->TOE2(3)                                      --------->AHL20(2)                              --------->AHL20(2)                                         <---------AHL20(1)                              <---------AHL20(2)                                         --------->ARR11(3)                           --------->YAB1                                                <---------ARR11(3)                       <----------DOF2                                             --------->YAB1         <---------ATHB12--------->AHL20(2) ----------->GT1           <----------DOF2    --------->AHL20(1)   ctaaaacacaaatcaagtgtttagacttttaataaaacttaaagaaaggtttatttgggttttatatgttcgctttagtctccaatactaatatattaag  18329600                                                                                                  ---                                                                                                  <--                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                             *TSS <--                                                                                             --------                                                                                            <--------                                           <---------GLK1(1)                                ---------                                    <---------YAB1                                       <---------ANAC55(2)       <---------YAB1              --------->ARR11(3)   <---------YAB1                 --------->CCA1(2)    <---------YAB1                --------->YAB1       --------->TOE2(3)              <---------ARR14(2) ----ANAC46 <-------TEIL  <-----------GT1  --------->GLK1(1)                          <---------SPL7   tggaacattataaatacatgcttcttatatactatatgatcatggatttcgaagaaacattatagaaaaaaaaacttgaaacaaatgcgatacggatacg  18329700    <-------TEIL ------>ZAT18 -----TEIL ----ANAC55(1) ----ANAC58 --->ANAC55(2) ----ANAC55(2) ----ANAC58 ----ANAC46 -----------------TaNAC69(2)                         <------NtERF2 -TEIL   ------------>CBF                 ----------->HVH21  --------->MYB46(3) -------ZAT18                       --------->ANAC58 <---------ANAC46 ->CCA1(2)                          --------->ANAC46 ----------->GT1  ----------->HVH21 -ARR14(2)                    ------>ZmHOX2a(1)    <---------ANAC46 --------->At4g35610          ---- >ARR14(2)          <---------YAB1  --------->ANAC58------>NtERF2 --------->ZAT18        ---------->DOF2   tgcacatacataccaatacactattattcatcctagacaagacactgacataggcgcgtataaacaaacgcgctgaaactgtggaagaaggaaaagaaga  18329800                                                ------->MYC3                                                <-------MYC2                                                ------->PIF4                                                <-------MYC3                                                <-------PIF5                                                <-------MYC4                                                <-------PIF4                                                ------->MYC4                                               --------->O2                                               <---------O2                                    <------MYB83------->MYC2                                    <---------DEAR3(2)                                    <------MYB46(1)                                   <---------------AtSPL8                                <---------MYB46(3)                                --------->MYB55(2)             --------->AtLEC2                               <---------AtMYB61------->PIF5 <---------AtLEC2                               --------->ALFIN1--------->TGA1a --------->ANAC58                               <---------DEAR3(1)--------->ALFIN1                            <---------DEAR3(1) <---------TGA1a --------->ANAC58                       --------->ANAC46       ------------>OsbHLH66                       --------->ANAC58<-------TEIL         <-------TEIL                       --------->ANAC58--------->SPL7    --------->DEAR3(1)                      <-------MYC2 --------->MYB55(2)   <------NtERF2                      ------->MYC3 <---------MYB46(3)--------->ATERF1(1)                      <-------MYC3<---------MYB55(1)--------->PCF5                  --------->HSFB2a(1)                      ------->MYC2<---------ANAC46  <---------PCF2                  <---------HSFB2a(1)                     --------->ANAC46<---------PCF2----------->TCP11(1)             <---------HSFC1(2)                     --------->ANAC58<---------ARR14(2)------>NtERF2           --------->ETT(1)                     --------->ANAC58<---------SPL7<---------PCF5         <---------ANAC58          ---------->DOF2----------->HVH21  ---------------->PIF3(2)<---------ZAT2  --------->HSFC1(2)          ===============================================bZIP_DOF   <---------At4g35610 ----->CCA1(2)     <---------ALFIN1--------->MYB111(1)<---------ALFIN1    <---------ANAC58   gatgagtagctatcaagcggaacacgcgcgacggtggtgggtacggagcacgtgggccaccgtgcatgcaagctgttcttgtcggaaacttcccctaaca  18329900                     --------->RAP2.6(2)                     --------->RAP2.3(2)                     --------->DEAR3(1)                    --------->RAP2.3(1)                    --------->ORA47(2)                    --------->DEAR4(2)                    --------->ATERF1(1)                    <------NtERF2                   <---------ATERF1(1)                   --------->At4g35610                   ------>NtERF2                   <---------At4g35610                   <------NtERF2                  --------->RAP2.6(2)                  --------->DEAR3(1)                  <---------DEAR3(1)                  --------->RAP2.3(3)                  --------->RAP2.3(2)                 --------->RAP2.3(1)                 --------->ORA47(2)                 --------->DEAR3(2)                 --------->ATERF1(1)                 <---------RAP2.6(2)                --------->ATERF1(1)                <---------ATERF1(1)                --------->PCF5                                                        <-------MYC3                <---------PCF2                                                        <-------MYC4               <---------PCF5                                                         ------->MYC4               ----------->TCP11(1)      --------->DEAR3(1)                           ------->PIF5             --------->ATERF1(1)       ------>NtERF2                                  <-------PIF5             --------->ALFIN1          --------->LBD16                                ------->MYC3            <-----------HVH21          --------->At4g35610                            <-------MYC2           ===========================bZIP_DOF                                        ------->MYC2           <---------ANAC46           --------->ANAC46                               <---------TGA1a           --------->DEAR3(1)         --------->DEAR3(1)                             --------->TGA1a           <---------TGA1a       <-----------HVH21                                   <---------O2           --------->TGA1a      ------>ZmHOX2a(1)                                    --------->O2           --------->O2       <---------ANAC58                                      <---------TOE1(2)           <---------O2       <---------ANAC58               <----------DOF2       <------------OsbHLH66         ------>NtERF2------>NtERF2  <---------LBD16         ==================================bZIP_DOF         --------->LBD16   <----------DOF2     <-----------GT1                     <---------ALFIN1     ------>ZmHOX2a(1)<---------SPL7 --------->ATERF1(1) ------>ZmHOX2a(1)<---------CCA1(2) <--------   acgtctccttccgccgtgggccgccgtccctttcctgtctccgccgaattgacctcttcctctctttccctctctcatctctctcccacgtgtgtttcct  18330000                                     ------>ZmHOX2a(1)                              <-----------GT1                              <---------ARR11(3)                              --------->ARR11(3)                         <---------AHL20(2)                         --------->AHL20(2)                         <---------AHL20(1)                         --------->AHL20(1)                                                     <----                      --------->AHL20(2)        --------->TOE2(3)                             <------                      <---------AHL20(2) <---------ICU4                                    <---------AHL20(1)                     <---------AHL20(1)  <---------AHL20(2)                            <---------AHL20(2)      *TSS           <---------AHL20(2) <---------ATHB12               <---------At4g35610 --------->AHL20(1) ---GT1              --------->AHL20(2) --------->AHL20(2)    ---------->ID1          --------->AHL20(2)   tctcatccatacacttctcttaattaatttattatcttcctaataaatattcttaatacattttgtttttttcatatgccttaagaaattttatatatta  18330100                                                  <---------ANAC58                                                  <---------ANAC46                                                  ============================bZIP_DOF                                                  <---------TGA1a                                                 <-------TEIL                                                 ------->TEIL                                                 --------->SPL7                                              --------->ANAC55(2)                                              <---------ANAC58                                              --------->ANAC58                                              <---------ANAC55(2)                                              <---------ANAC58                                          <---------ANAC58                                          <---------ANAC58                                         <---------------AtSPL3                                         <---------------AtSPL8                                     -------->ATHB1                                     --------->ATHB51                                     <---------ICU4                                     --------->ATHB12                                    --------->ICU4--------->TGA1a                                    <---------YAB1<---------ANAC58                                ---                          <---------MYB52(1)  --------->ANAC58                            <----------                 --------->ZAT6     <---------ATHB51 <---------TOE2(2)                   --------->ANAC46               <--------ATHB1    ------------>ATHB5  <---------TOE1(2)                   --------->ANAC58               --------->YAB1<---------ANAC46<-------TEIL                        --------->ANAC58 <-- <-----------GT1 <-----------GT1--------->LBD16<---------SPL7                    --------->ANAC58---- -----AHL20(2)<---------ATHB12 --------->ANAC46--------->TOE1(2)   <----------DOF2       --------->ANAC58 ---AHL20(2)  <---------ATHB51<---------LBD16--------->SPL7--------->ATHB12 --------->GLK1(1) <------   ttttgacaacttgtcaataatactattcgttacgcggaattattgggtacgtacgtgggtttcattgctctttgtctgatatcaagaaatcaagtcacat  18330200  Previous    Next  AGI:  At4g39403.1    Description:  PLS (POLARIS) Range:  from: 18329088    to: 18329693    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g39404.1    Description:  other RNA Range:  from: 18329728    to: 18330006    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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