Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->At5g28300                    ----------->GT1                  <---------ANAC46                 <------MYB46(1)                 <------MYB83                                                                  ------                <---------MYB46(3)                                                             <-----               <--------P                                                                    <-------              <-------GAMYB                                                              <---------ANAC58             <---------MYB46(3)                                                          <---------ANAC58             --------->MYB111(2)                                                  --------->GLK1(1)             --------->MYB55(2)                                                  <---------ARR14(2)            --------->ALFIN1                                                     --------->ARR14(2)          <------MYB83                                                    --------->MYB111(1)--------          <------MYB46(1)                                                <--------P      <---------ANAC46         --------->MYB111(2)                                           ----------->GT1 ------->TEIL        --------->CCA1(2)                     ---------->DOF2      ---------->DOF2--------->CCA1(2)      --------->CCA1(2)                   <---------YAB1     ----------->GT1    <------ZmHOX2a(1) ------->GLK1(2)--------->ALFIN1        <-----------GT1     ----------->GT1     =====================   gaatcaagagataggtggttgggggtaaaatgtatacaaatgttacaataaagtcttaagaagagtttaaaaagggtaagtaggatatgtagcttgcaga  18324300                                  <---------ALFIN1                                <-----------GT1                              --------->AHL20(2)                              <---------AHL20(2)      ------>ZmHOX2a(2)  <---------MYB52(1)                                              --------->ANAC58 --->At4g35610         --------->ANAC58                              <----------DOF2     --------->ANAC58 ----At4g35610         --------->ANAC58                          <---------CCA1(2)     ---------->DOF2 --HSFB2a(2)           ----------->GT1                       --------->TOE2(3)  --------->TOE2(3) ->HSFB2a(2)          <---------TOE1(2)                   <-----------GT1 --------->TOE2(3) ============HOX2a_HOX2a--------->TOE2(3)                 --------->RVE1(1)     --------->TOE1(3)   agacttgatcccatcccctaatctcacgttaattaaacacctctctcatgtacagacaaaatacctcatttctttaacttaaacttaacaaaagctacta  18324400                                  <---------YAB1                                                  <--                                --------->AHL20(2)                                         ----------                                <---------AHL20(2)                                    --------->YAB1                               <---------AHL20(2)                                     <---------ICU4                           --------->AHL20(2)                                         <--------ATHB1                       --------->ATHB51                                               <--------HAHB4                       --------->AHL20(2)                  <-----------GT1            --------->ATHB51                 --------->bZIP60(1)                      --------->AHL20(2)         --------->AHL20(2)                 <---------bZIP60(1)      <---------ARR14(2)  <---------DAG2         <---------ATHB51        --------->ARR11(3) <---------AHL20(2)         --------->ICU4        ------->GAMYB--------->AHL20(2)       <------ZmHOX2a(1)   <---------AHL20(1) ------>ZmHOX2a(1)       --------->YAB1 <---------ATHB12     <---------TOE2(3)<---------MYB52(1)  --------->ARR14(2)  <----------DOF2        --------->ICU4 <     <---------TOE1(3)--------->ICU4  <-----------GT1 --------->AHL20(2) <-----------GT1 <---------AHL20(2)   tgagattaaggattttgtgatgccattattttatttatttttagtatcctcttgcattaattaactttttttttataaccacatacaataattaaaagta  18324500                                                 --------->YAB1                                                <---------YAB1                              <--------                                               --------->AHL20(2)                           ---------                                              <---------ICU4                                <--------                                             --------->ICU4                                 ---------                                          --------->AHL20(2)                           --------->ZAT18                                          <---------AHL20(2)                           <---------ZAT18                                      --------->AHL20(2)    --------->At4g35610  ------->MYC3                                     --------->AHL20(1)   --------->YAB1         <-------MYC3            <---------ARR14(2)    --------->AHL20(2)   <---------ICU4         <---------ANAC58            --------->ARR14(2)   --------->AHL20(2)   --------->ICU4          <---------ANAC58      < -------ZAT6------->TEIL         <---------AHL20(2) --------->YAB1            <---------ANAC46  ----- >DOF2     <---------CCA1(2)    --------->AHL20(2) <---------YAB1   ----------->GT1    <---------ZAT14 ---------YAB1   <---------MYB52(1)  <---------AHL20(1)--------->YAB1 ----------->HVH21--------->ZAT14   gtattatttgtttgtatctgttatcgaaattgaaattaatatatataatttttataataatcagaagaagaggtaacatggcatgtgagtgcacagctgt  18324600 -At4g35610                                                                                  ------>ZmHOX2a(1) >ZAT2                                                                                      --------- -ZAT2                     --------->ARR11(3)                                           <----------DOF2 >At4g35610 --------->REM1(1)                             <-----------GT1             <---------At4g35610 ---------ALFIN1           <---------ARR11(3)          *TSS                      <----------DOF2 ------>HVH21             <-----------GT1             <----------DOF2        ------>ZmHOX2a(1)   gaccactcttcccttcaccatttgataaataccttcttccatcttccttcttctgtcttttgactctcttctctctctcctctctttctgctttcctcaa  18324700                   <---------At4g35610                            <----------DOF2         <----------DOF2                  <---------ARR11(3)                       <---------GLK1(1)              <---------DAG2     <----------DOF2    <---------ALFIN1                  --------->ARR14(2)           <---------ALFIN1 >TOE2(3)   --------->ZAT6     ------>ZmHOX2a(1)          <---------GLK1(2)          <---------ALFIN1   tctctctctttctatctctagagcttccacttcctctctaatggtggaaccaaaaccctagattccccctttcatcttctctacttcccacacttttctc  18324800                                                                         <----------DOF2                                     <----------DOF2          <<<<<<<<<TBF1     <----------DOF2                        <---------DAG2                   <------------------------ANAC81                        <----------DOF2           --------->MYB46(3)  ------>ZmHOX2a(1)        ------   tctcacaaactcttgagaaatgaagactttttcaagcttctttctctctgtaacaactctcttcttcttctccttcttttctctttcatttcaagcttca  18324900                                                                 <---------HSFB2a(1)                                                                 --------->HSFB2a(1)                                                                 <---------HSFC1(2)                                                                 --------->HSFC1(2)                                                                <---------ARR11(3)                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                                --------->ARR11(3)                                                                --------->GLK1(2)                                                                <-----------ARR10                                                               <---------GLK1(2)                             <---------At4g35610             --------->ANAC58                       <                             --------->At4g35610             --------->ANAC58                       <                    <---------GLK1(1)                   ----------->HVH21                           -        <----------DOF2 --------->WOX13(1)              ------>ZmHOX2a(1)              ----------->RAV1(1) --->REM1(1)        --------->GLK1(1)     ---------->DOF2 <<<<<<<GRF7    --------->HSFB2a(2)      ---   ccatctcagtctttatacagagaaatccatcagcttataagcttcaaagacgttcttcctgacaagaatcttctcccagactggtcttccaacaaaaacc  18325000                                                                                            ------>ZmHOX2a(1)                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                     <---------ANAC58                                                                                     <---------ANAC46                            --------->ANAC58                                         <---------TGA1a                  <---------ANAC58                          --------->ANAC46         <---------bZIP60(2)             ----------->GT1<----------ID1                  --------->ANAC58         <---------ANAC55(1)             <---------ANAC58                               --------->ANAC58         <---------ANAC58             <---------ANAC46                             <---------ALFIN1           <---------O2            <---------------------WRI1                <---------ZAT2               <---------ZAT14    <----------DOF2         --------->ANAC58          --------->At4g35610          --------->ZAT14  ------->TEIL    <---------ANAC58                    --------->ZAT2            <---------ANAC58 ---------ZAT18   <---------ANAC46                    <---------At4g35610       --------------------- ---------ZAT14  --------->MYB52(2)               ------>ZmHOX2a(2)             <---------ANAC58 -------->ZAT14<---------MYB52(1)            <---------WOX13(1)             --------->ARR14(2)      - ------>LBD16<---------ANAC58   ---------->DOF2 <---------ARR11(3)          <---------ARR14(2) <-----   cgtgtactttcgatggcgttacttgcagagacgacaaagttacttcgattgatctcagctccaagcctctcaacgtcggattcagtgccgtgtcctcgtc  18325100                                                                          --------->ZAT18                                                                          <---------ZAT14        <---           <---------LBD16                                                --------->ZAT14   ---------        ----------->HVH21                                               <XXXXXXXXXXXXXXXXXXXXMIR164C-    <---------CCA1(2)                                       --------->ARR14(2)              <--------  ------>ZmHOX2a(1)                                         <---------ARR14(2)         <-----------GT1 -->TaNAC69(2)                                          <------NtERF2  <XXXXXXXXXXXXXXXXXXXXMIR164A/B ---------->RAV1(2)                          --------->ANAC46      <----------DOF2  <----------DOF2 = ----CCA1(2) --------->LBD16               <---------ALFIN1<---------MYB52(1)  <---------At4g35610<--   tctcctgtctctcaccggattagagtctctgtttctctcaaactcacacatcaatggctccgtttctggcttcaagtgctctgcttctttaaccagcttg  18325200  Previous    Next  AGI:  At4g39400.1    Description:  BRI1 (BRASSINOSTEROID INSENSITIVE 1); kinase. Identical to Protein BRASSINOSTEROID INSENSITIVE 1 precursor (BRI1) [Arabidopsis Thaliana] (GB:O22476); similar to BRL3 (BRI1-LIKE 3), protein binding / protein kinase [Arabidopsis thaliana] (TAIR:AT3G13380.1); similar to BRL1 (BRI 1 LIKE), kinase [Arabidopsis thaliana] (TAIR:AT1G55610.1); similar to BRL1 (BRI 1 LIKE) [Arabidopsis thaliana] (TAIR:AT1G55610.2); similar to brassinosteroid receptor [Pisum sativum] (GB:BAC99050.1); similar to brassinosteroid insensitive 1 [Nicotiana tabacum] (GB:ABR18799.1); similar to BRI1 protein [Nicotiana benthamiana] (GB:ABO27628.1); contains InterPro domain Pro Range:  from: 18324655    to: 18328820    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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