Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                   --------->ARR11(3)                                                   <---------ARR14(2)                          ---------->DOF2          <---------ARR11(3)                      <---------ANAC58             --------->AGP1                      <---------ANAC46             --------->ARR14(2)                          ------       ---------->ID1 <---------ANAC58             <---------AGP1                          >>>>>>>>>>WRKY63  ------->TEIL<----------DOF2 --------->ARR11(3)  <---------CCA1(2)                      --------->ANAC58 ------->AtLEC2 <---------AHL20(2)----------->GT1----------->ARR10                       --------->ANAC58   catgcatttgtcttctcttttattgcgagaaagaaattgttaatatatgcttagatcttgtttgctattgcataaattgaaacttaacaacaagtcaaca  18315200                                                                                                   <-                                                                                               <-----                                                                --------->ICU4               <-------                                                             <--------P                      --------                                                         <---------ANAC46                    --------                                                      <---------ZAT14                  --------->AHL20(2)    ------->TEIL               --------->ANAC46       <---------SPL7                 ----------->GT1   <---------CCA1(2)<---------AtLEC2                <---------------AtSPL8         ---------->DOF2 -- --->MYB46(3) <---------AHL20(2) ---------->DOF2    <---------------AtSPL3       <---------YAB1------   acactgtatctcttaaatatttgcatttcatcgacgaaaggagcaaacctgttgagagtacgggtaagtatgagaacatcaccatgaaagtaaataagta  18315300     --------->DAG2    ---------->DOF2                                <-----------HVH21 <---------ANAC55(2)                          <-----------HVH21 --------AHL20(2)                        --------->ANAC58 ----AHL20(2)                   --------->ANAC58  <---------At4g35610 --ANAC55(2)                    --------->ANAC58 --------->MYB59 ->ANAC55(2)                  ---------->DOF2--------->ANAC58                 <---------AHL20(2) --->GT1                --------->ANAC46 --------->ANAC46                    --------->AHL20(2) ------->AHL20(2)   --------->AtLEC2     --------->ANAC58                 <----------DOF2 --->AHL20(2)    <-------TEIL<---------ATHB12--------->ANAC58     <---------YAB1  <-------TEIL   attaagtaaagttgagaaattcatacaaacaatgaagcaactcaagcaagtcaggtcatacataagttatcaaactcttttaaattcgtagaaatttgtt  18315400                                   <---------ARR11(3)                                   --------->ARR11(3)                                  --------->CCA1(1)                                  --------->RVE1(1)                       <---------AHL20(2)                       --------->AHL20(2)                   <---------CCA1(1)                   <---------RVE1(1)              ----------->GT1                  --------->ARR11(3)      <---------ARR11(3)                                       <-                  <---------ARR11(3)     <---------CCA1(2)                                <---------AHL20(2)                  --------->AHL20(1)   ------>ZmHOX2a(1)                                  --------->AHL20(2)              ---------->DOF2     --------->GLK1(1)      ---------->DOF2                 --------->AHL20(2)      --------->AHL20(2)      --------->AHL20(2)  <---------ZAT6             --------->ZAT6 <--------   ttaagcattaaaaaaaaaaagatattaaaaaatcaaatatcctatatctatagtgtaacaaaagaaacactgtatattaacacaaattagatttaattgt  18315500           ---------->DOF2  <---------------AGL15  --------------->AGL15                                              *TSS <-----------HVH21 <---------AtLEC2                       ----------->GT1        --------->GLK1(2) <---------ANAC46                      <---------TOE2(3)      --------->ARR11(3) <---------ANAC58                    ---------->DOF2          <---------GLK1(2)                  ---- <---------ANAC58 ----------->GT1 --------->AHL20(2)          <---------ARR11(3)               ------ --------YAB1  --------->ALFIN1  --------->AHL20(2)         ----------->ARR10 ------>ZmHOX2a(1)------ ----CBF>>>>>>>>>TBF1        --------->AHL20(2)    ---------->DOF2----------------------->TaNAC69(2)   tttgcttgaagaagaaagtgagggaaaatgaataaataaaaaaggttttaaaaaaaagagaaaagattcttctccctgtcctcgcttcttaaatggcaag  18315600                                                                          --------->ANAC58   --------                                                                          --------->ANAC58  ---------                                                                <---------AHL20(2)       --------->AHL20(2)                                     --------->YAB1             --------->AHL20(1)      <---------AHL20(2)     --------->GLK1(2)             --------->AHL20(2)           --------->AHL20(2)----------->GT1<--- ------>DOF2                      --------->YAB1             --------->YAB1     ----------->GT1  ---- --->ANAC58            --------->MYB52(1)             ----------->GT1   --------->MYB52(1)  <-------- --->ANAC58        <-------TEIL  --------->AHL20(2) ---------->DOF2 --------->AHL20(2)  --------->AHL20(2)   aaaggagactctgatgggaagttcataactgaaaaataaaaataagacagaaaacaaagttaaaaataaaataaaaacggaagagagaaaataaataaat  18315700                                                                                   --------->ABI4(1)                                                                                   <---------ATERF1(1)                                                                                  --------->RAP2.3(3)                                                                                  --------->DEAR3(1)                                                                                 --------->RAP2.3(1)                                                                                 --------->ERF1                                                                                 --------->ORA47(2)                                                                                 <------NtERF2                                                                          <---------MYB52(1)                                                                         <-------GAMYB                                                                         <-----------HVH21                                                                       <------NtERF2<------NtERF2                                                                       --------->RAP2.3(1)                                                                      ------>NtERF2------>NtERF2                                                                      --------->ABI4(1)                                                                     --------->RRTF1(3)                                                                     --------->RRTF1(2)                                                                     --------->DEAR3(1)                                                                     --------->RAP2.3(3)                                                                     <---------DEAR3(1)                                                                     --------->RAP2.3(2)                                                                    --------->RAP2.3(1)                                                                    --------->ORA47(2)                                                                    --------->ATERF1(1)                                                                    <------NtERF2--------->DEAR4(2)                                                                    --------->RAP2.6(1)                                                                    --------->DEAR4(2)                                                                    --------->DEAR3(2)                                                                    --------->ERF1--------->RAP2.6(2)                                                                    --------->RRTF1(1)                                                                   <---------ATERF1(1)                                                                   <---------RAP2.3(1)<---------LBD16                                                                   ------>NtERF2 --------->ATERF1(1)             --------->GLK1(1)                                    --------->ANAC46--------->RAP2.3(2)       ---------->DOF2                                            <---------DEAR3(1)--------->ATERF1(1)   --------->WOX13(1)                                            --------->LBD16<---------RAP2.3(1) ->AHL20(2)  <---------GLK1(1)                                   ------>NtERF2  <---------DEAR4(2) >AHL20(2)  --------->ARR14(2)                                  <---------ALFIN1<---------ATERF1(1)-- ------AHL20(2)                                                ---------->CDC5  ------>NtERF2     <-- ----->AHL20(2)          <-----------GT1                       <---------LBD16 <---------DEAR3(1) --- -AHL20(2) <------ZmHOX2a(1)<----------DOF2                   ------>ZmHOX2a(1)--------->ANAC46  ----   aaaatcactcaaaggatttccacagtttttctttccatgttgatttagcccattcgtagacttcctccgcgccgccgttagacgccgcctcggaagtatc  18315800        --------->ALFIN1      --------->DEAR3(1)      <---------ANAC46                                                                      <-------GAMYB   --------->DEAR3(1)                                                                      ----------   ------->GAMYB                                                                         <-------TEIL  <---------MYB55(2)                                                                    --------->ARR14(1)  --------->DEAR3(2)                                                                    --------->CCA1(2)  --------->MYB46(3)                                                                    --------->GLK1(2)  --------->ATERF1(1)                                                                  --------->ARR14(2)  <------------AtMYB77   ---------->DOF2                                               <---------GLK1(2) -------->P         <------NtERF2                                                      <---------ARR14(2) ------->MYB46(3)  ------>NtERF2                                              <---------ANAC58      < -------At4g35610 --------->DEAR3(1)                    <---------AHL20(2)    <---------ANAC58  <---- ------>At4g35610---------->ID1<-------TEIL------>ZmHOX2a(1)   <---------AHL20(2)      --------->ARR11(1) ----->ANAC46  --------->MYB52(2) <---------CCA1(2)<---------MYB52(1)<---------LBD16 ----------->ARR10   agcaaccgccgtggtgttcgtcgccttcaaaggctcgtttctctcctctctctggtatttttttttttatttctgggtttacttgtgaagattcggttat  18315900                                                                                                   --                                                                                                   <-                --------->ICU4                                                                    <--              --------->YAB1                                                                      ---        --------->ATHB12                                                                        -----       <------ZmHOX2a(2)                                                                       <-----       <---------YAB1<-----------GT1                                                          <------      --------->ARR11(3)                                                                    ---------     --------->GLK1(1)                                         <-----------------AGL1      ------>ZmHOX2a(2)     <---------GLK1(1)                                  --------->HSFB2a(2)               <------ZmHOX2a(2) ->GT1<---------ARR11(3)                                <---------HSFB2a(2)              <---------ARR14(2) ---------LBD16 <---------YAB1           ------>ZmHOX2a(1)     <-----------------AG      --------->ARR14(2) -----YAB1   <---------YAB1   <---------YAB1           <---------LBD16        --------->ATHB12<------   acttcggagatcattgttataattcacttgttctgatttagtcctacttgtcaaatttctggattgtcgaaattggcaattcattgtctcagatcgtatg  18316000       ------>ZmHOX2a(2)      <---------At4g35610     <---------ARR14(2)     <---------AGP1     --------->ARR14(2) ------->ATHB12                                                                     ---------->DOF2 --------ICU4                                                                     ------>ZmHOX2a(2) -------YAB1                                                                    <---------AGP1 ------>ICU4                                                                    <---------ARR11(3) ---->YAB1                                                                      --------->ARR14(2) ----YAB1                                                                       <---------ARR14(2) ---TOE2(2)                                             <---------AHL20(2)   <---------HSFB2a(2) >TOE1(2)                          <-------TEIL         --------->AHL20(2)   --------->HSFB2a(2)   -- ---TOE1(2)             <---------ZAT6<-----------RAV1(1)                   <---------LBD16      ----   attattggatctgattttgaattttagagttagagagttcatgttggagttttgggattaaaatcgtttctatattcttctggatctaaagcatttttag  18316100  Previous    Next  AGI:  At4g39390.1    Description:  transporter-related. similar to transporter-related [Arabidopsis thaliana] (TAIR:AT4G09810.1); similar to unknown [Populus trichocarpa] (GB:ABK93556.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 18315569    to: 18318037    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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