Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ----------->GT1                         <---------ARR11(1)                         --------->ARR14(2)                      <---------ANAC58                      <---------ANAC55(1)                      <---------ANAC55(2)                      --------->ANAC55(2)                    <------ZmHOX2a(2)                   <---------ARR14(2)                   --------->ARR14(2)                 --------->LBD16               <---------LBD16                     --------->ANAC46             --------->ARR14(2)                   -------->P             --------->TCP16(1)                  <---------ALFIN1             <---------ARR14(2)               --------->ZAT6            ===============HOX2a_HOX2a     <----------DOF2          <---------ALFIN1            ================HOX2a_HOX2a   <---------ANAC58     --------->LBD16     <------ZmHOX2a(2)<---------ANAC58    <---------ANAC58     --------->ANAC46                   ---     ==============HOX2a_HOX2a        <---------ZAT14         --------->HSFB2a(2)             -------    <-----------HVH21------>ZmHOX2a(2)--------->ZAT14         <---------HSFB2a(2)         <---------ARR11(3) >WOX13(1)  <------ZmHOX2a(1)        --------->ALFIN1        <---------LBD16              --------->ARR11(3)   ggacccgatcacgaggacccggatccgtatcgataaacagtgtagctttcactaccccattttcccagaaacacctctcaaaaatttctcaagaacttgt  18296400                   --------->ANAC46               --------->DOF5.7(2)                                                                  <             <---------ANAC58                                                                       -             <---------ANAC58                                                                --------   --------->ARR11(3)            <---------AHL20(2)              ------>MYB46(1)             <-------   <---------ARR11(3)       <----------DOF2                      -------->P                  <-------  --------->RVE1(1)--------->ANAC58                              ------>MYB83  --------->ALFIN1     -  --------->CCA1(1)--------->ANAC58<---------YAB1   <---------YAB1    ------>ZmHOX2a(1)      -------- ------>AHL20(2) <---------DOF5.7(2)           <----------DOF2 --------->MYB46(3)----------->HVH21 -- ---->GT1    <---------ANAC46   <---------AHL20(2) <-----------GT1<---------ALFIN1<---------PCF2 <---   ataaatatctcagtttcgttcacgcagtgtcttttttatttttgtatttcttttttcattgttcaccaactcctcttgaaggtgggacagagtccagctc  18296500                                                  <---------ANAC58                                               ----------->TGA1                                             <---------ANAC46      --------->AtMYB61              ------>MYB46(1)    ----------->RAV1(1)              ------>MYB83 <---------O2   <---------ALFIN1                 <---------ALFIN1   --------->AtMYB61               --------->MYB46(3)  --------->MYB46(3)              --------->TCP15(2) ---------ALFIN1                 --------->PCF2----------->HVH21 -------->DEAR3(1)               <---------TCP20  <---------ANAC58 ->At4g35610                   ----------->HVH21  <---------ANAC46 --At4g35610                  --------->HSFB2a(2) <---------bZIP60(2) --ZAT2                       --------->LBD16<---------ANAC55(2) -------->AtMYB61            <---------LBD16 <---------ANAC58 ->ZAT2                      --------->ANAC46--------->ANAC55(2) ------->MYB46(3)           <---------LBD16  <---------ANAC58        <-------TEIL ------ALFIN1      <------NtERF2 <---------TCP15(1)         <----------DOF2                     -----   caccaccaccatagccatcgcgtcgttttctccgggacccacttatttcgtgacgtttctctctttgtatatacatacaattgttttcagtctcaatttg  18296600                                         ------->TEIL                                  <---------ANAC46                                <------MYB83            --------->ZAT6      <---------MYB46(3)            --------->ANAC46    <------MYB46(1)          <-----------GT1      <---------AtMYB61        --------->AHL20(2)     --------->ALFIN1 --------->ETT(2)              <---------DEAR3(1) <---------ZAT18              <---------ABI4(1) <---------ETT(2)        <-----------RAV1(2)   <---------CCA1(2) <-----------GT1  --------->YAB1 ---->At4g35610          <---------LBD16<---------GLK1(2)   ------>ZmHOX2a(1)  --------->WOX13(1)<---   ctgtccacattttaacacaactctatctcaggggtggtgtctgaatctcgtctctctcattcctatttatcccaatctaatctatcacaaacccttccac  18296700                                                                                             <-------                                                                                         <-----------                                                                                         ------------                                                                                        <---------ANAC46                                                                                  <---------AHL20(2)  <----------DOF2                                                               <----------DOF2 <---------ANAC58                                                           <----------DOF2*TSS <---------ANAC58        <----------DOF2                                <----------DOF2 <---------ANAC58 ---------CBF----------->GT1                                         <-----------GT1    <---------ANAC58   attgcttttgtcagtctgtaaaattctctttgaatcagtgaatcactcacttaaatccaaaacagtttttttttctttctttctttatttgcttgttgtg  18296800                                                  <------------------------ANAC81     --------->LBD16                                              ------>ZmHOX2a(2)                     <---------LBD16                                             <---------GLK1(1)                  <---------ICU4                                             --------->GLK1(1)               -------->HAHB4                       <-------TEIL          <------ZmHOX2a(2)               <--------ATHB1                    <---------HSFB2a(1)     <---------ARR11(3)               <--------HAHB4                    --------->HSFB2a(1)     --------->ARR14(2)               --------->YAB1                    --------->HSFC1(2)      --------->ARR11(3)               <---------ICU4                    <---------HSFC1(2)   --------->HSFB2a(2)                 --------->ATHB51                --------->LBD16          <---------HSFB2a(2)                --------->ICU4               <---------HSFB2a(2)      <---------LBD16                     --------->AHL20(2)               --------->HSFB2a(2)     <---------LBD16                      <---------ATHB51               --------->LBD16        ------>ZmHOX2a(1)                     <---------YAB1      --------->At4g35610             ===============HOX2a_HOX2a          --------->YAB1 --ANAC46<-----------HVH21<---------MYB52(1)<---------ARR14(2)           --------->AHL20(2) ----AGL15    <---------LBD16         ==============HOX2a_HOX2a          <---------AHL20(2)    ------ --->AGL15   <---------LBD16    <-----------GT1  <----------DOF2        --------->AHL20(2)  ---------   gaatcaatagctgtctccgggaaaattcgttttttttctccttcgggatctctttttttttttttttggttttatttaataattatccccgagccaacat  18296900                                                                                            <-------TEIL                                                                                            =========                     ---------->ID1                        --------->ARR14(2)               ------>ZmHOX2a(2)                   <---------ANAC58                        --------->GLK1(2)               <------ZmHOX2a(2)          ----------->GT1                                  ------->TEIL                    ==========      --------->ARR14(2)                         <---------ANAC58                         --------->ARR14(2)      <---------ARR14(2)  ------>ZmHOX2a(1)      <---------ANAC58           --------->GLK1(1) --->TOE2(3)       <---------ANAC58             <---------ZAT18  ------->TEIL             <---------ARR14(2) -->RAV1(1)      <-----------GT1   <---------ALFIN1        <---------ARR14(2)      ------->GAMYB  <--   ttattgtcgattcggtttatttcgtctccttcgtcttccactcttactagtgcatgctctgaatctgtatgtaatgggagttcaacagtctggatccatt  18297000               <---------WRKY38(1)               <---------WRKY12                                                              <-------              --------->WRKY18(1)                                                            <-------           <---------DEAR3(2)                                                           --------->ATHB12           <---------MYB46(3)                                                        <---------At4g35610          --------->ETT(1)                                                           --------->At4g35610        --------->ARR14(2)                                                           <------NtERF2        <-----------HVH21                                                           <---------DEAR3(2)        <---------ARR14(2)                                                          <---------ATERF1(1)      --------->LBD16                                                              <---------DEAR3(1)    <---------LBD16                                                               <---------ORA47(1)   <---------ZAT2                                                                 --------->ATERF1(1)   --------->ZAT2                                                               <---------MYB46(3) ------>ZmHOX2a(1)    <----------DOF2                   --------->ZAT14        <---------AtMYB61 =======HOX2a_HOX2a<---------ARR11(3)                  <---------REM1(1)    <-----------RAV1(1)------ =======HOX2a_HOX2a--------->ARR11(3)                <---------ANAC46<---------YAB1--------->ETT(1) -------YAB1 <-----------HVH21                 <---------YAB1     --------->ICU4--------->MYB55(2)   atcctagccgggtcgggtcaaggtctttgagtaagagagacaattcgttttgattcggtgtagaagacatcatgaatactggtggtcggctcattgctgg  18297100                                                                                                 ----                                                                                                <----                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                     ----------->GT1       ------->GAMYB        <---------DOF5.7(2)                               ----------->GT1<-------    ----------->RAV1(1)     ---------->DOF2                                ----------->TGA1  -------- --ANAC58              <---------YAB1                            <---------AtLEC2   --------->DAG2 --ANAC58      --------->ARR14(2)                           <----------DOF2----------->HVH21 <------- >NtERF2       <---------ARR14(2)--------->DEAR3(1)   --------->YAB1  ------->TEIL ---------->DOF2   ctctcacaacagaaacgaattcgttctcattaacgccgatgagagtgccagagtaagaataacttttgtatgaatttgtgacgaaaaaagtttaattttt  18297200                                                                                       <-------MYC3                          --------->ARR14(2)                                           ------->MYC3                          <---------ARR14(2)                                       ------->GAMYB                          --------->GLK1(2)                                      --------->ANAC58                      --------->YAB1           <-----------------AGL3            -------->P     <----------DOF2 <---------YAB1            ------>ZmHOX2a(2)                 --------->ANAC58 <----------DOF2 <---------GLK1(2)            --------->At4g35610              <---------ALFIN1 ------>ID1  ------>ZmHOX2a(2)                <---------At4g35610           <---------LBD16         - -------GT1 <------ZmHOX2a(2)          --------->ARR11(3)  <---------HSFB2a(1)--------->LBD16      <- --AHL20(2)--------->ARR14(2)          <---------AHL20(1)  <---------HSFC1(2)--------->ANAC46  <----- ->AHL20(2)<---------ARR14(2)          --------->AHL20(1)  --------->HSFB2a(1)------>NtERF2<XXXXXXXXX --ICU4    --------->ARR11(3)     ----------->GT1          --------->HSFC1(2)--------->RAP2.6(2)<----   tctctttctttgggatctagattatgagaatctagatggaatattttgatctgaaattggaagtttctagggagtaatgccgcaacccacatgttctgtt  18297300  Previous    Next  AGI:  At4g39350.1    Description:  CESA2 (CELLULOSE SYNTHASE 2); cellulose synthase/ transferase, transferring glycosyl groups. Identical to Cellulose synthase A catalytic subunit 2 [UDP-forming] (CESA2) [Arabidopsis Thaliana] (GB:O48947); similar to CESA9 (CELLULOSE SYNTHASE 9), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G21770.1); similar to CESA6 (CELLULOSE SYNTHASE 6), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G64740.1); similar to CESA5 (CELLULOSE SYNTHASE 5), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G09870.1); similar to cellulose synthase [Populus tremula x Populus tremuloid Range:  from: 18296791    to: 18302186    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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