Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <------ZmHOX2a(1)                                          <------ZmHOX2a(2)                            <---------At4g35610                                          =============HOX2a_HOX2a                     <---------HSFC1(2)                <-----------GT1          <-----------HVH21           <---------AHL20(2)--------->At4g35610                --------->YAB1        <------NtERF2                  --------->AHL20(2)--------->HSFC1(2) ----->ZmHOX2a(1)                   <---------DEAR3(1)     <----------DOF2       <---------LBD16   tcctataacgcttacaaataacaatttgcaaaacatcgtcgtcgatcacaggaaaacttccctttagacatttatttcgccatctcggaagcttagacgt  18259200                           <---------At4g35610                           --------->At4g35610                        -------->P                --------->TOE2(3)              <---------AHL20(2)       --------->ARR11(3)<------------AtMYB77       <---------ARR11(3)--------->MYB46(3)                                                         -      <---------CCA1(2) <---------At5g28300                                                         <   <---------ARR11(3)  --------->MYB52(1)                                               <---------ARR14(2)   <---------AHL20(1)<---------MYB52(2)    <---------YAB1                               --------->ARR14(2)   --------->ARR11(3)<---------MYB46(2)   <-----------GT1        --------->YAB1--------->YAB1 <------   tggaatatatatctattttcttaactaaccgctgatttttgtattttcattacaaaaaaaaaaactattgtaatgccatattcaaaatagtatatgcttt  18259300                           <------ZmHOX2a(1)                          <---------YAB1                                                           --                          ----------->GT1                                                         ---                        --------->YAB1                                                           <---                     --------->WOX13(1)                                                         <----                   --------->MYB46(3)            <---------AHL20(2)                             <----           --------->AHL20(2)                    --------->AHL20(2)                             <----  ----------->GT1 <-----------------AG           <---------YAB1                                 <---- -------->ZAT14   -------->P          <----------DOF2                       <---------ARR14(2)  ----- ---------ZAT14  --------->WOX13(1)<-----------GT1              <---------ZAT2             <--------- ----DOF2  --------->YAB1<---------TOE2(3)   --------->AHL20(2) --------->ZAT2          <---------ZAT6   ggtacagtagaaataatatcaaccaattaggataaattttctttccattatataattagtctccctagcttagaggcaaatttgtagtttgtgttacgac  18259400                                                                 <---------At4g35610                                                                 --------->At4g35610                                                                --------->ANAC58                                                                --------->ANAC58                                                            --------->AtLEC2                                                            --------->ANAC58                                                            --------->ANAC46          <-----------HVH21                                                            --------->ANAC58         --------->ALFIN1 --------->SPL7                                            <-------MYC3            --------->O2 ------->REM1(2)                                           ------->MYC3            <---------TGA1a ------>ALFIN1                                             <-------MYC2            --------->TGA1a ------------AtSPL3                                        ------->MYC2            <---------bZIP60(2) -----ANAC46                                          --------->TCP16(2)           <---------O2 -----O2                                             <---------TCP11(2)            <---------ANAC46 -----bZIP60(2)         --------->ALFIN1             <---------TCP20               <---------ANAC58 --------------SPL14---------->DOF2                  <---------PCF5                <---------ANAC58 ---->O2        --------->At4g35610 --------->At4g35610 <---------ALFIN1---------->DOF2 --GT1    ---------->DOF2        <---------ATHB12    <---------TCP16(1) =====================bZIP_DOF   gtgtacggactatatagcacctcaaagttgggccaatgagatgaaaatgggcctgggtccacatgcaagcagacaaaagaaatcgacgtgtcccatatga  18259500                                                                                   ----------->GT1                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                                   --------->GLK1(1)                                                                   <---------GLK1(1)                                                                  --------->ARR11(3)                                                                  <---------ARR11(3)                                                                 --------->At4g35610                                                                 <---------At4g35610                                                  ----------->HVH21<---------RVE1(1)                                              <-------TEIL<------------CBF         <------MYB83                                              <---------ZAT14<-----------HVH21     <------MYB46(1)                                  <-----------------AGL3<---------YAB1       <----------DOF2   gtctcgtagcaagagtatgggagaaaccagagtcgtccattttttgggttcagtgactgtcattgtcagatatctatagctttgttggtaaaatttcaca  18259600              <---------AHL20(2)             --------->AHL20(2)        <---------ANAC55(2)      <-----------GT1                ----------->GT1          --------->ANAC58      --------->AHL20(2)       <---------HSFB2a(2)            --------->ANAC55(2)     <---------ANAC58   *TSS --------->ANAC55(2) --------->GLK1(2)                 --------->ANAC58        <---------ANAC58   <---------ICU4          <---------GLK1(2)                  --------->ANAC55(1)<---------ANAC58  <---------AHL20(2)       <---------ARR11(3)                 <---------ANAC55(2)<---------ANAC58  --------->AHL20(2)       --------->ARR11(3)              ------>ZmHOX2a(1)   --------->ARR11(3)  --------->ICU4          <---------RVE1(1)           <---------At4g35610      <---------ARR11(3)   tgaaaaaattacataataaatagagaagagattttggaagagagaaaatgcaatttagctcctcacgtattagcaatttaagttcttgtcttggtcttcc  18259700                                                                                 <---------ARR11(3)                                                                       ------>ZmHOX2a(1)                                                                    <------ZmHOX2a(2)                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)              <-         --------->ANAC58                                          --------->ARR11(3)  --------->LBD16         --------->ANAC58                                        ----------->ARR10    <---------ANAC46         --------->ANAC46               -------->ATHB1         <-----------GT1   --------->ARR11(3)<- >>>>>>>>>>GATA-1            --------->ZAT14               <---------WOX13(1)   <---------CCA1(2)  <-   ctcgatttcaaacgacattaaccaaaaccagagaactacgaattattcggtgagttctctcattgatacgatcctcttctatatatctccgtgttcttct  18259800                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                            --------->ZAT2   --------           --------->AHL20(2)                                               --------->At4g35610   ---------->DOF2                                                          <---------At4g35610 --------ANAC58          <----------DOF2          ----------->HVH21         <---------ZAT2   ------->TEIL --------ANAC46          <---------DAG2 <---------GLK1(2)      <----------DOF2              <-------- --------ANAC58       <-----------GT1<-----------GT1           <---------DAG2               <--------   agcttgaaagcattttaaaagtttttacttttggaggtttcacattctctccctgaacgattttgctttattttgttcagcttcggttctcgtcgaatct  18259900 -->HSFB2a(1)                 <-----------------AGL3 -->HSFC1(2)                --------->GLK1(2) ---HSFC1(2)                <---------ARR11(3) ---HSFB2a(1)         ------>ZmHOX2a(2) ----ARR10           <---------At4g35610 --ARR11(1)          --------->At4g35610                     <-----------GT1 --ARR14(2)         <---------AGP1                          <---------CCA1(2) ->ARR14(2)      <---------WOX13(1)                      <----------DOF2             ------>ZmHOX2a(2) -CCA1(2)      --------->ATHB12           <-------TEIL<-----------GT1            <---------YAB1 -ARR14(1)    <-------TEIL  --------->ARR11(3)  <---------YAB1                 --------->YAB1    ----   tctgtttctctgtcgattcattgatctgaaaatctaaaaatggattcattctgatttaacttttatcttgttcaaactcatttatgatcccaaatttgtt  18260000                                                                                         ----------->GT1                                                       <----------DOF2           <---------ANAC46                        ------>ZmHOX2a(1)           ------>ZmHOX2a(1)            <---------ANAC58                    --------->ARR14(2)       <---------ARR11(3)                  <---------ANAC58                    --------->GLK1(2)        --------->ARR11(3)                  ----------->RAV1(2)            <---------AHL20(2)               <-----------GT1                     --------->At4g35610            --------->AHL20(2)              --------->YAB1               <---------ARR11(3)       <----------DOF2  <----------DOF2    --------->ICU4                --------->ARR11(3) ----->MYB52(2) --------->YAB1           --------->WOX13(1)<-----------GT1     <-----------GT1   cgtttcattctttataaattagaatccttttttgttcttgtggcaattatcttcctccttttctctgttttgaaagatttgttacctgcagaagttaatt  18260100  Previous    Next  AGI:  At4g39210.1    Description:  APL3 (large subunit of AGP 3). Identical to Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplast precursor (APL3) [Arabidopsis Thaliana] (GB:P55231;GB:Q9ZR38); similar to APL4 (large subunit of AGP 4), glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] (TAIR:AT2G21590.2); similar to APL4 (large subunit of AGP 4), glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] (TAIR:AT2G21590.1); similar to APL2 (large subunit of AGP 2) [Arabidopsis thaliana] (TAIR:AT1G27680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47595.1); similar to ADPglucose pyrophosphorylase large subunit [Solanum habroch Range:  from: 18259603    to: 18263411    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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