Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <-------GAMYB             <---------At4g35610             --------->At4g35610            <---------MYB46(3)          <------NtERF2          <---------At4g35610          <-------GAMYB          --------->At4g35610         <---------DEAR3(2)         ------>NtERF2        <---------DEAR3(1)      <-----------HVH21  ------>ZmHOX2a(2) <------ZmHOX2a(2) -------->ARR14(3) -------->AGP1 -------->ARR14(2)          ------->TEIL  <-----------GT1 ---------ARR14(2)          <---------ARR14(2) ---------ARR14(3)          --------->ARR14(2)                                    --------->bZIP60(1) ---------GLK1(2)           <---------ARR11(1)                                    --------->ANAC55(2) -------->ARR11(3)          <-----------ARR10                                     <---------ANAC58 -----------ARR10           --------->GLK1(2)    <-----------GT1                  <---------ANAC55(2) ---------ARR11(3)         <---------ARR14(1)<---------DAG2                       <---------ANAC58 --------At4g35610         <---------CCA1(2) <----------DOF2                      <---------bZIP60(1) --------CCA1(2)      --------->DAG2     <---------YAB1              <---------AHL20(2) -------->ARR10      ---------->DOF2   <---------ICU4                --------->AHL20(2) -----MYB52(1) <---------ETT(2)        <--------HAHB4         <---------DAG2     --------->MYB59 ------HVH21--------->MYB55(2)        <---------YAB1          <----------DOF2   <-----------GT1------   cagatcttcgtcggctgttgacaaaaagcgaatctcttgtattattacttttcacttcatactactttttataaatttctagttacgtcccaatctcatg  18240200              --------->ANAC58              --------->ANAC46       <---------AHL20(2)      <---------AHL20(2)         <---------YAB1                         ------->GAMYB               <      --------->AHL20(2)      --------->AHL20(2)                       --------->MYB46(3)          <-   <---------AHL20(2)      --------->ARR11(3)                <---------AHL20(2)          <---------CCA1(2)  --------->AHL20(2)       <---------ARR11(3) --------->TOE2(3)  --------->ZAT18<---------ANAC46   --  --------->ICU4     --------->YAB1 <---------HSFB2a(2)     --------->AHL20(2)  <---------ANAC58   -- --->AtLEC2   --------->ANAC58<---------AHL20(2)          --------->TOE2(3)     <---------ANAC58  <--   catatttattaatttcaggccatttatgagattttattacagaagttacctcgatttctacattaaatgcacaaccacgattccttgtgccaaatctctg  18240300                <---------AtMYB61             <-----------RAV1(1)        <---------ANAC58                                          --------->ANAC58      <<<<<<<<<<WRKY63                                            --------->AtLEC2  <---------MYB46(3)                                              --------->ANAC58 -------GAMYB<---------MYB46(3)                              --------->DAG2 --------MYB46(3)<------MYB46(1)                           ---------->DOF2                       <--- ------->MYB111(2)                                  --------->ARR14(2)                          <---- ------->MYB55(2)<------MYB83                       <---------ARR14(2)                         ------ ------P<---------ANAC58       <---------TOE2(3)    --------->GLK1(2)                  <----------DOF2   gttgttgttgacttgttgttggtgtttcaaattgatgttttgtgcttatacaagtatctgcaaaaggcatgcaaaattagctatgaacacttttgtaatc  18240400                                                      <---------YAB1                                                --------->AHL20(2)                                               --------->AHL20(2)                                            <--------HAHB4                                            -------->ATHB1                                            --------->ATHB51       --------->At5g28300                  --------->AHL20(2)      ----------->GT1             <------ZmHOX2a(1) --------->YAB1              <---------AHL20(2)     --------->ZAT6              ----------->GT1<---------AHL20(2)      <---------WOX13(1) -------DOF2          --------->MYB52(1)    <---------AHL20(2)        --------->ATHB12     <---------YAB1 -----ICU4         --------->AtMYB61       <---------ATHB51          <---------YAB1        <---------TOE2(3) --->ICU4        <---------ARR11(3)        --------->ICU4      <---------AHL20(2) ---------->DOF2   tttacgaacagtaaaacaagaccataactgaaatcaggaaaaacaattatttaatcaaaattgttttaattttgattgatattaaaaagaattaagtttg  18240500                            --------->YAB1                   ----------->HVH21                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                 --------->CCA1(2)                 --------->At4g35610                                                            <----                --------->AGP1                                                                 <-----                <---------AGP1   <-----------RAV1(1)                                           ------                <---------ARR14(2)         ------------>CBF      --------->YAB1                <-----                <---------ARR11(3)       <-------TEIL           <---------AHL20(2)             ------                --------->ARR11(3)    <---------ANAC46    <---------ZAT6                ----------->GT1                --------->ARR14(2) --------->ALFIN1       ----------->GT1       <---------AHL20(2)               --------->GLK1(1) --------->ALFIN1       ----------->GT1        --------->AHL20(2)               <---------GLK1(1) <---------ANAC46   ---------->DOF2   <------ZmHOX2a(1)<------ZmHOX2a(1)   gcgaaatttgaagtaagagatctgaaggaataatagtgtggggttcacaatagaaaaagagtgtaaataataggactgtcattaaataaggagtaaataa  18240600       ----------->GT1  <-----------RAV1(1)                                                             --------->TOE2(3) -----AHL20(2)                                                                 <-----------GT1 ----AHL20(1)          *TSS  --------->At4g35610     ---------->DOF2        <---------DAG2 --->AHL20(2)      <-------TEIL      <---------AHL20(2)                  <---------ALFIN1 ----AHL20(2)     --------->CCA1(2) --------->AHL20(2)      <---------ZAT14 <----------DOF2         < --->AHL20(1)  --------->MYB59  <------ZmHOX2a(1)---------->DOF2     --------->At4g35610        <----   aattttgttgggaaaattagatacaaatatcagaggaaataaatctaagaaaaaagaaagagtccagagtttgctccacttttacctttgaaattttgtt  18240700                                                            --------->ANAC46                                                            --------->ANAC58                                                            --------->ANAC58                                                        --------->ANAC58                                                        --------->ANAC58                                                       <-------TEIL                                                      --------->ARR14(1)                 <---------ANAC46                                                      --------->CCA1(2)                  <---------ANAC58                                                     --------->ARR11(1)                  <---------ANAC58        <---------ICU4                               <---------ARR14(2)      --------->DAG2    <---------AHL20(2)     --------->ALFIN1          --------->ARR14(2)     ---------->DOF2    --------->AHL20(2)  <------ZmHOX2a(1)            <---------GLK1(2)  --------->AHL20(2) ----------DOF2      <-----------RAV1(2)           ----------->ARR10    <---------AHL20(2)        <-- -------GT1          <---------LBD16          ---------->DOF2<---------MYB52(2)         <-------TEIL   tcctttttaatttttgcgaaatttcaggagtgtttctggttaatgtgagaaagtagattcgcaagaaaccaaaattaaaaaagtgagcgattcgtgttcg  18240800                                                                                                    -                                                                                                    -                                                                                           --------->WRKY12                                                                                           --------->WRKY38(1)                                                                                          <---------MYB52(1)                                                                                   --------->At4g35610                                  <---------YAB1                                   <---------At4g35610                                 <---------ARR11(3)                            <-----------HVH21 ----                                 <---------AHL20(1)                    --------->YAB1    <-------GAMYB                    <---------ARR11(3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    --------->ARR11(3)                               --------->GLK1(2)   ------------               ------>ZmHOX2a(2) --------->AHL20(1)                 <---------GLK1(2)   <---------ANAC46     <---------ANAC46<---------YAB1                        --------------->AGL15  --------->MYB59<--- -------WOX13(1)  <---------MYB52(1)   --------->ATHB12    <---------------AGL15  >>>>>>>GRF7  ------   attgattttgtggatgatccattatctttctccaatatttttgatttgagcgagagttttgcttcattcggaatcttaagatgtcaggtcccgttgatcg  18240900                                   --------->AHL20(2)                                   <---------AHL20(2)                               <---------AHL20(2)    <---------DEAR3(2)                          ------>ZmHOX2a(2)          <---------MYB46(3)                         <------ZmHOX2a(2)          <---------DEAR3(1)                        <---------AGP1             <---------MYB52(1) -------->ANAC58        --------->AGP1            <-----------HVH21 -------->ANAC58        <---------ARR14(2)      ------>ZmHOX2a(2) ----->ARR14(2)         --------->ARR14(2)     <------ZmHOX2a(2) --------->WRI1         <---------ARR11(3)    <---------ARR14(2) ------GLK1(2)          --------->ARR11(3)    --------->ARR14(2) >ZmHOX2a(2)           <---------CCA1(2)  <---------LBD16   <-----------HVH21                   -----   attcgcaataccatgtaagtgtatcagatctgtttattttaatctctggatccgtcggtttctgtcaatgcgattttgctagggttttattcgagtaatg  18241000                                                                                                    -                                                                                                    -                                       --------->ZAT18                                              <                                      <------MYB83                                        <---------ANAC58                                      <------MYB46(1)                                     <---------ANAC46                                     <---------MYB46(3)                                   <---------ANAC58                                 ------>ZmHOX2a(1)                --------->ANAC46        -----------                      <---------MYB52(1)            --------->ALFIN1 --------->TOE2(3) <------MYB83 <                    <---------ANAC58 <---------------AtSPL8       --------->ANAC58     <------MYB46(1)       <---------ARR11(3)    <-----------GT1       <-------GAMYB  --------->ANAC58    --------->MYB59 ---->YAB1          <---------ANAC58 <---------------AtSPL3   <-----------GT1         <---------MYB46(3)   agaagcgaagttctatgcaatttcgtttttttttcctagtgggtactgcttagggttgtgctatttacaagcctcaattttgagaagttgggtcgtgatt  18241100  Previous    Next  AGI:  At4g39170.1    Description:  SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21520.2); similar to SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative [Arabidopsis thaliana] (TAIR:AT1G75370.1); similar to transporter [Arabidopsis thaliana] (TAIR:AT2G21520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47586.1); similar to CM0216.430.nc [Lotus japonicus] (GB:BAF98225.1); similar to phosphatidylinositol transfer-like protein III [Lotus japonicus] (GB:AAK63247.1); contains InterPro domain Cellular retinaldehyde-binding/triple functio Range:  from: 18240623    to: 18243789    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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