Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->At4g35610                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                         <                                         <---------ARR14(2)       --------->AHL20(2)               <-                                         --------->ARR11(3)       <---------AHL20(2)               --                                       --------->ANAC58          --------->AHL20(1)                --                                 <---------ANAC58                <---------AHL20(1)                <-                                 <---------ANAC58 --------->TOE2(3)                                <-    ------>MYB83          --------->ZAT18<---------ARR11(3)      <---------AHL20(2)              <---    ------>MYB46(1)       <---------ZAT18--------->ARR14(2)      --------->AHL20(2)     --------->YAB1  <---------MYB59   --------->YAB1     --------->ANAC58   ----------->GT1     <---------YAB1  ------- --->GT1          --------->AHL20(2)<---------ZAT14     <----------DOF2<---------YAB1  <---------YAB1   aaaaccaaactcgtagacaaaataatagaccactagcctgcacgatctgcttcattaactttgtaaatttattttgatttatcaatgcgataatagacgc  18236400                                                    ----------->RAV1(1)                                                  <------NtERF2                                                 ------>NtERF2                                                 <---------RAP2.3(1)                                                 <---------ATERF1(1)                                                <---------DEAR3(1)                                                --------->ATERF1(2)             <-----------ARR10                  <---------ATERF1(2)             <---------ARR14(2)                <------NtERF2         ------>NtERF2                         --------->ATERF1(1)        --------->LBD16                       ------>NtERF2        ------>NtERF2                         <---------DEAR4(2)       <---------RAP2.6(2)                    <---------ERF1      <---------LBD16                         <---------ATERF1(1)    <-----------GT1                           <---------RAP2.3(1) ---------RVE1(1)                             <---------RRTF1(1) --------GLK1(2)                             --------->O2 ------->ARR14(2)                            <---------O2                                     <------ ------->ARR11(3)                            <---------RAP2.3(2)                           <---------ANAC46 --------ARR11(3)        --------->LBD16     <---------DEAR3(1)                  <---------ANAC46 --------ARR14(2)     ------>ZmHOX2a(1)     --------->ATERF1(1)                  <---------ANAC58 ------TOE2(2)<---------ATHB12--------->At4g35610--------->RAP2.6(2)      ------->TEIL<----------DOF2 -->ANAC46   --------->ARR14(2)           ----------->HVH21        <-------TEIL  <---------ANAC58   agattttttccggccaatcttctcctccgagtagctaaaccctagcgacggcggcaacaatggtctagattcaacgtatcgtttcgtggtttatcgggta  18236500                                                    <-----------GT1                         <--------                                             <---------MYB52(1)                        <---------ARR11(3)                                            <-------GAMYB                              --------->ARR11(3)                                         <---------At5g28300                          --------->YAB1                      ---------->DOF2   <-----------GT1                         --------->HSFB2a(2)                 ------>ZmHOX2a(1)     --------->MYB46(3)                       <---------HSFB2a(2) ---MYB52(1) <-----------GT1        <---------AHL20(2)         --------->YAB1  <---------LBD16   tttctagtttccaattctcctcatcaaagtttcagtttttaatcaccgttgatttttctattcaatggtacttgaattttctctggaatgatattcaatt  18236600                   --------->ATHB12                 <---------WOX13(1)               --------->ATHB12            <---------ANAC58            ----------------->AGL1  <------------------------ANAC81         <---------WOX13(1)        <----------DOF2        <---------ANAC58           <---------DAG2   <----------DOF2        <---------ANAC58       <-----------GT1    ----------------->AG         <---------GLK1(1)  ---       --------->ATHB12     --------->ARR14(2)   ---------->ID1                --------->CCA1(2)  <--      <---------YAB1        --------->ZAT14<-----------GT1                 <---------TOE2(3)     <--- -AHL20(2)  <---------ANAC58<---------ARR14(2)<----------DOF2   <---------AHL20(2)        <-------TEIL   gttctgttttgattgcctgattgattacagtattctccttttttttttcttttccttttctgtgaatttatgagtttatggatatactaatatacatata  18236700             <------------CBF        ------>ZmHOX2a(2)       <---------At4g35610       <------ZmHOX2a(2)       --------->CCA1(2)       --------->At4g35610      --------->ARR11(3)      <---------ARR14(2)      --------->ARR14(3)      <---------ARR11(3)      --------->ARR14(2)      --------->AGP1     <---------GLK1(1)    ----------->ARR10 ------>ARR11(3)                      --------->YAB1         <---------CCA1(2)     <----------DOF2 -------ARR11(3)                     <---------YAB1       ------>ZmHOX2a(1)  ----------->HVH21 ------CCA1(2)                     --------->YAB1 ---------->DOF2    <------------CBF *TSS   tatcttgagatctgccattggtcttgtttttggcctagtataatggtttgacaaaagctccttctatcttgtattgaaggtgacactttggtgagaggga  18236800                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                <-----------RAV1(2)                                         -------->P            --------->ZAT2                   -----                                   <---------YAB1              <---------ZAT2               <--------               <---------ATHB12 <---------YAB1             =================RAV         --------->ZAT18        ---------->DOF2     --------->ARR11(3)    <------ZmHOX2a(2)                     <---------ZAT18 --------->ARR14(2)         <---------GLK1(2)<---------LBD16 <-----------RAV1(2)       ---------->ID1 <---------ARR14(2)       <---------TOE2(3)------->GAMYB   ----------->RAV1(1)    <----------DOF2   gagtatttgtgaaagaaatcaatggatttagattttgatgatcaaccctcggatcatgctgcaccagcaggtaattggggttttcttttgtccactttca  18236900                                                              <------MYB46(1)                       --------->ALFIN1                       --------->At4g35610          <---------DAG2                                      <------MYB83                    -------          <----------DOF2              ------->TEIL          <---------DEAR3(1)               -------         <---------ANAC58           <---------YAB1           <---------MYB46(3)             ---------    <---------AtLEC2 <---------bZIP60(2)                     --------->ALFIN1     --------->DAG2   <-------TEIL      <---------REM1(1)XXXXXXXXXXXXXXXXXXXX>MIR865-5P             ---------->DOF2 ---->TOE2(3)        <-----------RAV1(1)        <---------AHL20(2)              ---------->DOF2 ----- --DOF2  <---------ANAC58 <---------ANAC46     --------->AHL20(2)    ----------->GT1      --------->AtMYB61   ttagtttcatggctttttgtttgatgtggctgaaacttatgaatttggatttaatagttagggctggtgcaaggtttaaaccaaaaggcagaccacaacc  18237000                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                     ------>ZmHOX2a(2)                                                          <------ZmHOX2a(1)         <------ZmHOX2a(2)                                                          ==================================HOX2a_HOX2a                                                          =================================HOX2a_HOX2a                              --------->ANAC46          --------->LBD16            <---------ARR14(3)                           ------->GAMYB               <-----------RAV1(2)         <---------ARR11(3)         --------->ANAC58--------->ANAC58       <-----------RAV1(1)                <---------ARR14(2)     --------->ANAC58  <---------ALFIN1         ===================RAV             <-----------ARR10     --------->ANAC58  --------->MYB46(3)       <---------REM1(1)                  <---------AGP1 -->ANAC58           --------->HSFB2a(2)     ----------->HVH21                     --------->ARR14(2) -->ANAC58           --------->ANAC46      =================RAV                    --------->ARR14(3) >MYB46(3)       <----------DOF2   <---------ALFIN1    <---------LBD16             --------->ARR11(3) -->GAMYB--------->ANAC58--------->ANAC58  ----------->RAV1(2)            ---------->DOF2---------->ID1   caagaagaagcaagtctctctttccacaacccaaacaacactctcccctgatgttgcccaggaaaaactctcaacacaaagtgaagatctcgtccctcta  18237100                   <---------ZAT2             --------->GLK1(1)            <---------ARR14(2)            --------->ARR14(2)            <---------GLK1(2)           <---------HSFB2a(1)              ------>MYB46(1)           <----------TaMYB80               -------->P           --------->HSFC1(2)               ------>MYB83           --------->HSFB2a(1)            ------->GAMYB   <---------AHL20(2)      --------->At4g35610                --------->MYB46(3)   <------ZmHOX2a(2)                     <---------MYB55(2)  <-----------RAV1(1)  <---------ARR14(2)                    --------->ANAC58 --------->AHL20(2)  --------->ARR14(2)           <---------ANAC58       <---------ICU4                            ----- -----REM1(2)--------->GLK1(2) <---------ANAC58       --------->YAB1                            <---- --->HSFB2a(2)     --------->ZAT2   --------->ANAC46 <---------YAB1                             <---- ----HSFB2a(2)     <---------At4g35610  --------->ANAC58<---------YAB1                    --------->ARR11(3)   gacggatcatcggagattcccagcagttttgtttcttccctcaaccaacttgtttattattatatgttgttctgaagttggcagtgttttaagatgtgga  18237200                                                    --------->ICU4                                           --------->ARR14(2)                                 -------                        ----------->RAV1(2)<---------ARR14(2)       --------->ATHB12         --------            --------->At4g35610          --------->LBD16          >>>>>>>>>>>>>>>>>LFY   ----------->GT1            <---------At4g35610         <---------ANAC46          <<<<<<<<<<<<<<<<<LFY  ----------->GT1 ---->ARR14(2)     <-----------GT1     ----------------->AGL1     -------->P        --------->At4g35610 -----ARR14(2)   <----------DOF2       <---------LBD16        --------->ARR14(2)  --------->YAB1 -----GLK1(2)<---------GLK1(2)       --------->ALFIN1    <-----------GT1         <---------YAB1   ---   ttctttctatttgcagatgctttaccttctgagactaatgtgccggatagtggaagtattaacaaatctaccattggaacattatcagaagaggtaaaag  18237300  Previous    Next  AGI:  At4g39160.1    Description:  DNA binding / transcription factor. similar to unnamed protein product [Vitis vinifera] (GB:CAO47585.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 18236786    to: 18239812    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version