Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->YAB1                                                                  <<<<<<<<<ARR2                                                                  <---------ATHB12                                                                --------->WOX13(1)                                                               --------->MYB46(3)                                                             --------->MYB52(1)                                                             ------>MYB83                                                             ------>MYB46(1)                                                            --------->MYB55(1)                                     ------>MYB83          <---------MYB52(2)                                ------>MYB83               <---------MYB46(2)                                ------>MYB46(1)--------------->AGL15                              <---------MYB46(2)           <---------MYB59                              --------->AtMYB61<---------------AGL15                              <---------MYB111(2)          <---------MYB111(1)                        <---------MYB46(3)    <-----------------AGL3                      <---------MYB52(1)<---------GLK1(2) --------->ANAC55(2)                  --------->MYB52(1) ------>MYB46(1)      <---------ANAC55(2)                --------->MYB46(3) --------->TOE2(2)   <---------MYB52(1)                  --------->YAB1                <---------MYB52(2) --------->TOE1(2) --------->MYB59          --------->YAB1---------          --------->ANAC58    --------->MYB46(3)     --------------->AtSPL3  --------->MYB46(3)          --------->ANAC58    <---------MYB59 <-----------------AGL1         <---------ATHB12       < --GLK1(2)--------->ANAC46    <---------MYB111(1)    --------------->AtSPL8--------->WOX13(1)      <-   tccaaatcagacacacaaacaaacgttggctaccaaacctacgattcttcttaattcggtacctaacaatcaaacttcaatcaccaatttctatcatcaa  18227500                                                                                        <---------YAB1                                                                                    <----------DOF2   --------->TOE1(3)                              <----------DOF2              --------->GLK1(1)   --------->TOE2(3)                             <---------ICU4             --------->LBD16 >TOE2(3)                                       <---------YAB1             --------->HSFB2a(2) ---------At5g28300                        <---------CCA1(2)               <---------HSFB2a(2)     <- ----------GT1     ----------->GT1       --------->YAB1                   <---------LBD16--------->YAB1   tttacccttaaaaaaaacaactagaaaaacaatcgagacttactcatatcatctttatcaacaatgtcgaatttcttccggaaatactttctgataacct  18227600                                               --------->ZAT14                                               <---------ZAT14                                             <---------ZAT2                                    <---------ARR14(2)           <---------At4g35610      --------->GLK1(2)           --------->At4g35610<---------DEAR3(1)           <---------ZAT2    <---------At4g35610                                              <------         <-----------RAV1(2) --------->At4g35610   --------->ALFIN1                 <---------YAB1       <-----------HVH21   ---------->CDC5   --------->ZAT2                     <---------ANAC46       <-----------TGA1  <---------ALFIN1    --------->At4g35610     <------ZmHOX2a(1)       <-------  <------NtERF2          --------->ANAC46===================================HOX2a_HOX2a --------->MYB59 --------->LBD16    <---------GLK1(1)    <------ZmHOX2a(2) ----------->ARR10    <---------ANAC58 --------LBD16     ------->TEIL <------NtERF2<---------At4g35610 --------->LBD16<---------ANAC58   cgccggaagcgtcagctaatgcatttcccacagcggcgaatcgatccagctcagtgtcgctaagttccgaaggagactcgttgcttatgttaggccgttt  18227700                                --------->LBD16                                ------>NtERF2                                <---------MYB46(3)                               <---------ANAC46                              <---------LBD16                             <---------RRTF1(1)                             <---------RAP2.3(1)                             ------>NtERF2                            <---------RAP2.3(3)                            --------->ATERF1(2)                            <---------DEAR3(1)                            <---------ATERF1(2)                          --------->MYB52(1)                         --------->DEAR3(1)                         ----------->HVH21                        --------->MYB46(3)                                            <--------------                        --------->DEAR3(2)                                            ---------------                      --------->ARR14(2)                                             <---------YAB1 <                      <---------ARR14(2)                                    <---------RAP2.6(2)     -                 --------->ANAC58     <---------ANAC46                <------ZmHOX2a(1)             -                 --------->AtLEC2  ----------->HVH21              ---------->DOF2<-------GAMYB     -- ---MYB52(1)     --------->ANAC58<------NtERF2                ---------->DOF2   <---------MYB46(3)--- --RAP2.6(3) <-----------HVH21<------NtERF2                >>>>>>>>>TBF1---------->DOF2  --------->YAB1   tgagtttgaagccatagtcaggcaaaaccgacggcgggagacgggaacagcaattgcagaagaagaaagaaaggataagcggctgttactataagaagaa  18227800                                       <-----------RAV1(1)                                  <------NtERF2                               <---------LBD16  <-------TEIL--------->ARR14(2) --------->LBD16 --------->CCA1(2)           --------->DEAR3(1) --------->ARR14(1)        ---------->DOF2 -AGL15       <---------ARR14(2)<---------ANAC46      =============HOX2a_HOX2a >AGL15      <------ZmHOX2a(1)------->GAMYB    <---------ARR14(2)                                   - ---------ARR14(2)      --------->ANAC58      <------NtERF2                         --------->At4g35610 -------->ARR14(2)      --------->ANAC58    <---------ANAC46      --------->HSFB2a(2)              <- -------->ARR11(1)      --------->RAP2.6(2)<---------LBD16        <---------HSFB2a(2)            ---- ------->CCA1(2)        --------->ANAC46 --------->ALFIN1   <------ZmHOX2a(1)       <---------At4g35610 -------->ARR10--------->GLK1(1)--------->DEAR3(1)    <------ZmHOX2a(2)    --------->ALFIN1      <---   gagatacgaagagaaggatttgcagaccgcaacgccggagactgtggcggaatcagatcgaaggacttagagaagaagtgcgactgagctaacattttgc  18227900              <---------ANAC55(2)              --------->ANAC58              --------->ANAC55(1)              --------->ANAC55(2)              --------->ANAC46              --------->ANAC58            --------->MYB52(1)     <---------LBD16                                            <------           <---------ZAT14 --------->YAB1                            ------------>CBF       <-------- -------->ATHB12      *TSS<---------ATHB12--------->DAG2      <---------YAB1           <------ZmHOX2a(2) --------YAB1<---------LBD16      ------->GAMYB            <------ZmHOX2a(2)        <---------MYB46(3) ----------->AGL15 --------->MYB46(3)   ---------->DOF2   <---------ARR11(3)      <---------MYB52(1) ------------AGL15---------->DOF2--------->MYB46(3)       --------->ARR11(3)    <---------MYB46(3)   tatgagtgggaagttcacggaacagccagtcatcaacgacggaaaaggtttgaatagagagatcacgattatgcaatctcatccgttggatcaactttac  18228000                         <------MYB46(1)                         <------MYB83                        --------->MYB59                      <---------MYB52(1)                    <------MYB83                    <------MYB46(1)                                             <-----------GT1                    <---------DEAR3(2)                                          --------->ANAC46                   --------->MYB59                                     ----------->RAV1(1)                 <---------MYB52(1)                                   --------->MYB46(3)               <---------DEAR3(2)                                    ------>MYB83               <------MYB83                                          ------>MYB46(1)     <----------DOF2 -----GT1      <------MYB46(1)                                      --------->ANAC46  <---------ARR11(3) --DOF2       --------->MYB59           ----------->GT1  <----------DOF2      <-----------GT1   atctctcaaacttggttcggttcggttcggtttgatattggaccgtataatgtaatcaactttgaattaccaacaacattttacacaatttctttttttt  18228100                                                                                      <---------YAB1                                                                                    <---------ICU4                                                                                   <---------YAB1                                                                                   --------->ICU4                                                                                 <---------ICU4                                                                                <------ZmHOX2a(2)                                                                                <---------YAB1                                                          ------>MYB46(1)       =====================                                                          ------>MYB83         <---------ARR11(3)                             --------->ATHB12     <---------ICU4               --------->ARR11(3)                            <---------YAB1        --------->YAB1           ---------->DOF2                            --------->ICU4       <---------ATHB12      <----------DOF2<-----------RAV1(1)                 --------->AHL20(2)         --------->ANAC58         --------->HSFC1(2)                 <---------ARR11(3)         --------->ANAC58         --------->HSFB2a(1)               --------->ANAC58             --------->ANAC55(1)      <---------HSFB2a(1)   <------NtERF2               --------->ANAC58             --------->ANAC46         <---------HSFC1(2)  <---------RAP2.6(2)               --------->ANAC46   <---------YAB1 --------->ICU4--------->SPL7 --------->YAB1    -----   tttttttttttgttcccaagaaattagaacatgattgtgattacacaagtaatcatgaccatccgtatggaagctttcaaagatcattatggtggccaga  18228200                                                          ------>ZmHOX2a(2)                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                      ------>ZmHOX2a(1)                                                    ------>ZmHOX2a(2)                                                  <---------ARR14(2)                                                  --------->ARR14(2)       ----------->HVH21                                                ------>ZmHOX2a(1)        --------->At4g35610   <-----                                                =================HOX2a_HOX2a             --------->DEAR3(1)                                              ----------->RAV1(2)        <---------ZAT2 --------->ATERF1(1)                                             ================HOX2a_HOX2a --------->ZAT2<---------ATERF1(1)                                             ======================HOX2a_HOX2a   <---------ANAC46                                             <------ZmHOX2a(2)           <---------At4g35610   ------                  ---------->DOF2           --------->ARR14(2)     <-----------HVH21  <---------ETT(2)       ------>ZmHOX2a(1)                    <---------ARR14(2)  <---------At5g28300   --------->ETT(2)      --------->TOE2(3)<-----------GT1   --------->DEAR3(2) ------>ZmHOX2a(1)    <---------ANAC58 =============HOX2a_HOX2a               ------->TEIL===============HOX2a_HOX2a   <---------ANAC58 ----->DOF2  --------------->AGL15 <---------ANAC46 ----------->RAV1(2)<-----------RAV1(2)------>NtERF2   aagtttctccttaatcttcttaaagaaacccttcttctcgtgaaccgatcctgatcctgatcctgttacggtcgcagctgatggcttgtcgacgcctagc  18228300                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                 ----                                                                                                <----                                                                           --------->SPL7------->TEIL                                                                        --------->ANAC55(2)  <-------                                                                        --------->ANAC46 --------->GLK1(2)                                                                      <-----------GT1    --------->ARR14(2)                                           --------->ANAC46        <---------YAB1    --------->At5g28300                               ------>ZmHOX2a(1)                  --------->AHL20(2)----------->GT1<- ----ZAT2          <---------YAB1        ------>ZmHOX2a(1) <---------ETT(2)------->TEIL  <---------ARR14(2) --->ZAT2       <---------MYB52(1) <---------ALFIN1   ------>ZmHOX2a(1) <---------ANAC55(2)--------->YAB1   ttcgattttgtttcatccgttatattagttttcctccctactccttcgccattctcctccgtctacatttttatacgtaccatggacagtgaatcttgat  18228400  Previous    Next  AGI:  At4g39120.1    Description:  inositol monophosphatase family protein. similar to VTC4, 3'(2'),5'-bisphosphate nucleotidase/ L-galactose-1-phosphate phosphatase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT3G02870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47579.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809) Range:  from: 18225569    to: 18227922    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g39130.1    Description:  dehydrin family protein. similar to LEA (DEHYDRIN LEA) [Arabidopsis thaliana] (TAIR:AT2G21490.1); similar to Late embryogenesis abundant protein (Protein LEA) (GB:P21298); contains InterPro domain Dehydrin; (InterPro:IPR000167) Range:  from: 18228112    to: 18228846    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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