Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ALFIN1       <-------TEIL    --------->ANAC55(2)    <---------ANAC55(2)<----------DOF2   --------------->AtSPL8   <---------------AtSPL8                               ----------->GT1   --------------->AtSPL3    <-----------GT1            <----------ID1 ------>AHL20(2) <----------DOF2          ----------->GT1                      <-----------RAV1(1) -------AHL20(2) <---------DAG2        ---------->DOF2---------->DOF2       <----------DOF2----------   attaatacgtacaatcccactttagcttttatttctgtcttcaaaggaaaataagaaaaagaaaaaatcgtatgagagcttttgtggtccaaattgtgac  18209000             <-------TEIL  --------->TOE2(3)           --------->ARR14(2)  <---------AHL20(2)      --------->ANAC55(2)   <-----------GT1          <---------ANAC58       <---- <---------AHL20(2)      <---------TOE1(3) <---------YAB1                <---------ANAC58  <---------ARR11(3) --------->AHL20(2)      <---------TOE2(3)<---------TOE2(3)           <----------DOF2   --------->LBD16 <---------AHL20(1)     <-----------GT1  <-----------GT1    ----------->GT1            <---------LBD16 ->GT1     <---------ARR14(2)XXXXXXXXXXXXXXXXXXXX>MIR2112-3P--------->YAB1            <---------LBD16   taatttttttgaaaatacgtttgtgtttacgttatatacacatttacgatttacatctccaattgttatatgctttcttgaaatttcgaccgggatatta  18209100                                                                <---------ATHB12          --------->ANAC46                                 <-----------HVH21          --------->ANAC58                                --------->ALFIN1         <-------TEIL          --------->ANAC58       ------->TEIL           <---------ANAC58        <---------ANAC58  <---------ANAC58              <---------GLK1(2)       <---------ANAC58        <---------ANAC58  ---  <---------ANAC58 ---------->DOF2                    <---------ANAC46    --------->ICU4    --------- -----AHL20(2) ---------->DOF2  <---------CCA1(2)    <---------LBD16   <-----------------AGL3     ---   tatgccttgtccaagaaaaaagaaagagagacctgaatcttggaactaagttatttgggggtgtcactcatgggccaatattgggtccattttgaaaagc  18209200                                                            ------>MYB46(1)                                                            ------>MYB83                                                          <---------MYB59                      --------->YAB1                      <---------MYB52(2)                  -------                  <---------AHL20(2)             <---------YAB1                             --------- ------>ANAC46    --------->AHL20(2)           <-----------GT1                              --------- ->DOF2      ------->GAMYB           <---------TOE2(3)    <---------MYB46(2)                --------- ------>bZIP60(2)<---------ATHB12   --------->MYB52(1) <-----------GT1           ---------->DOF2   <-   acatcactatttcaacccaattaatgagagtcccatactaacgctgatgttactattgtaccgaaccagttttgaagcccattaaaagcccaatacgaaa  18209300                                                         <---------ETT(2)                                                         --------->ZAT18                                                 --------->ANAC58 --------->AHL20(1)                                                 --------->ANAC46 --------->AHL20(2)                                                 --------->ANAC55(2)      <---------At4g35610                                                 <---------ANAC55(2)   <---------At5g28300    ----------->GT1                 ----------->GT1   <---------ANAC46<-----------GT1 --->DOF2                       --------->ICU4   --------->ANAC58 <---------AHL20(2) >ANAC58                    --------->At5g28300--------->CCA1(2) --------->AHL20(2) >ANAC46                   ----------->GT1    --------->ARR14(2) <---------AHL20(2) >ANAC58                  ----------->GT1     <---------ARR14(2)--------->AHL20(2)           *TSS ------TEIL        ----------------->AGL1--------->AHL20(2)     <---------AHL20(1)      ------>ZmHOX2a(1)   gtacgtttgtaaatttgggagcccaagaggggtaaatatggaataaaaaatacgcgatgtggacaaaataatttacagctactatctctcctccgtcttg  18209400                                               <---------ARR11(3)                                    <---------ICU4                                    --------->AHL20(2)                                             --                                   <---------ATHB51                                               ---                                   <---------ATHB12                                              ----                         <-----------HVH21     --------->ARR11(3)                              ------               ----------->HVH21   <---------AHL20(2)       ------>ZmHOX2a(1)                 <------      <---------AtMYB61  <-----------TGA1     --------->RVE1(1)                              <-------      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->CCA1(1)                   --------->DAG2 xxxx <---------ANAC46   --------->ICU4 --------->AHL20(2)  ------>ZmHOX2a(1)         ---------->DOF2 <---   gcttcgtggtggtctctctgacattatcgtcagacaaataatttctaaatatctctcctctcctctcgtttgattccaaaaaaaaaagctcatcgacgaa  18209500                               <-------GAMYB                            <------NtERF2                           --------->MYB55(2)                           <---------MYB46(3)                           ------>NtERF2                          <---------DEAR3(1)                          --------->ALFIN1                         --------->ATERF1(1)                        <---------ATERF1(1)                        <---------MYB46(3)                        <---------RAP2.3(1)                       <---------DREB2C(2)                       <---------DEAR3(1)                       <---------RAP2.6(2)                       <---------DEAR4(1)                       <---------ANAC46                       <---------ANAC58                      <------NtERF2                    --------->ALFIN1                    ----------->HVH21                    <---------AtMYB61                    <---------DEAR3(1)                   <-------GAMYB                   --------->ATERF1(1)                   <---------ABI4(1)                   <------NtERF2                  <---------MYB46(3)                  <---------RAP2.3(1)                  <---------ATERF1(1)                 <---------RAP2.6(2)                 <---------DEAR3(1)                 <---------DREB2C(2)                 <---------DEAR4(1)            <---------At4g35610          ---------->DOF2<------NtERF2        <---------ARR14(2)       <---------ANAC46<---------ANAC58       ------->TEIL      <---------LBD16------>NtERF2            --------->ARR14(2)    <---------DEAR3(1)<---------ABI4(1) --------->DEAR3(1) ------->MYB52(1)<---------ANAC46     <---------At4g35610 ------>TOE1(2)  <---------ANAC58     <------NtERF2   <---------ANAC58 ----->MYB46(3)  <---------ANAC58     ------>NtERF2   <---------ANAC46                            --- --->MYB52(1) --------->ALFIN1<---------MYB46(3)  --------->At4g35610                             --- ---SPL7 <------NtERF2--------->ATERF1(1)     <---------AGP1                                      <-- --MYB52(2)--------->DAG2<-------GAMYB--------->LBD16 <---------ANAC58          --------->At4g35610 xxxxxxxxxxxxxxx>smallRNA(fl3)<-----------RAV1(1)----------->HVH21              <---------At4g35610<- ------MYB52(2) <---------ABI4(1) <---------SPL7------>ZmHOX2a(2)               <---------ZAT2   <---   cgaacgatggcggaaagtggcggtggcggtggctgttgtccgccgatggatctgatgcgttcagagacgatgcaacttgttcagctcattgttcccatgg  18209600                              --------->AGP1             --------->DEAR3(1)<------ZmHOX2a(2)           <---------At5g28300<---------ARR11(3)         ----------->HVH21    --------->ARR14(2)       <---------At4g35610    <---------ARR14(3)       --------->At4g35610    <-----------ARR10  <---------At4g35610         --------->ARR14(3)            <---------SPL7  --------->At4g35610         <---------ARR14(2)          --------------->AtSPL3 ------>GLK1(2)               --------->ARR11(3)          <-------TEIL ------>ARR14(2)             --------->GLK1(1)         --------->TGA1a -------ARR14(2)<-----------ARR10      <------NtERF2   <---------TGA1a --------At4g35610           <---------GLK1(1)    ===============bZIP_DOF ------GLK1(2) <---------CCA1(2)------>ZmHOX2a(2) ---------->DOF2        ------>ZmHOX2a(1)   aatctgctcatctcaccgtctcttaccttggagatcttggcctcgtccaattcaaagacgtccgtactcattctccttctctctatctctcgatgttttt  18209700                                                         <---------At4g35610                                                         --------->At4g35610    <---------ARR14(2)                                                     <-----------HVH21          --------->ARR14(2)                                                 <---------LBD16            <---------MYB52(1)                                               <---------ARR14(2)          <-------GAMYB                                               --------->ARR14(2)         <-----------RAV1(1)<-------                                   <-----------GT1 --------->LBD16      ------>ZmHOX2a(1)   <--------                       <---------ZAT18        <---------GLK1(1)     <-----------GT1       -----------   gttgacgaaatatgctattggattgtgcattttcttatttccaattgcaaatccgcgtctgatgaacaattttcctctgttggatttggattttgacggg  18209800                        <---------TOE2(2)                ------->TEIL                        <---------TOE1(2)             <---------ANAC55(2)                       --------->STY1(1)              --------->ANAC46                       <---------STY1(1)              --------->ANAC58            <---------ARR14(2)                     --------->ARR14(2)        <---------HSFB2a(2)                 ---------->DOF2 --ANAC46   --------->ARR14(2)     <---------TOE2(3)  --------->ANAC55(2) -LBD16 --------->HSFB2a(2)  <---------AHL20(2)    <---------ARR14(2)           <---------MYB52(1) >HVH21 <-----------------AGL1     <---------TOE1(3)  --------->ANAC58      <---------At4g35610  <---   gttttctggtctcgaatttggaaccctaggtttaattcaggttttaaaaagagtttacgcatctatctatctatgtatagctgttatttgaatatcgcga  18209900  Previous    Next  AGI:  At4g39080.1    Description:  VHA-A3 (VACUOLAR PROTON ATPASE A3); ATPase. similar to VHA-A2 (VACUOLAR PROTON ATPASE A2), ATPase [Arabidopsis thaliana] (TAIR:AT2G21410.1); similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1), ATPase [Arabidopsis thaliana] (TAIR:AT2G28520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47222.1); similar to putative vacuolar ATPase subunit 100 kDa subunit [Mesembryanthemum crystallinum] (GB:CAD27718.1); similar to V-type ATPase 116kDa subunit family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB46970.1); contains InterPro domain ATPase, V0/A0 complex, 116-kDa subunit; (InterPro:IPR002490) Range:  from: 18209393    to: 18215050    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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