Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------ICU4                                                     -                                 --------->YAB1                                                     -                                <---------ATHB12                                                    -                           --------->ANAC58                                                       ---   --------->ATHB12        ------>ZmHOX2a(2)                                           --------->YAB1  <---------AHL20(2)       --------->ANAC58                 ----------->RAV1(1)   <----------DOF2 --- --------->GT1            <------ZmHOX2a(2)    --------->At4g35610        <---------HSFC1(2)      --- --->LBD16             <---------ANAC58     --------->At4g35610           --------->HSFC1(2)     <--- >NtERF2               <---------ANAC58     <---------At4g35610       --------->DEAR3(1)    --------- -->LBD16        ------->TEIL   --------->MYB46(3)       --------->ANAC46 --------->HSFB2a(1)   <---- --LBD16<---------------------WRI1     ---------->DOF2  --------->LBD16   <---------HSFB2a(1)  ------   ctagtttattggcgaaatgaacatggcgatcgcaaccattacaaagagctgcttcatccgcacaacaaaacaccgaagcttcttctttatcacaaacagc  18206400    <-----------ARR10    <---------ARR11(1)    --------->ARR11(3)    <---------ARR11(3)    --------->ARR14(2)    <---------ARR14(2)   ------>MYB83   <---------CCA1(2)   ------>MYB46(1)   <---------ARR14(1) --------->AtMYB61 -------->ANAC58 -------->ANAC46 -------->ANAC58 ------>ANAC58 ------>ANAC58 ------>ANAC46                                            <---------AHL20(2) ------ZAT18            <----------DOF2           <----------DOF2  <---------ANAC46 ->DOF2              <-----------GT1              <---------DAG2   <---------ANAC58   <---------ANAC58 -----ALFIN1 <----------DOF2 ------>ZmHOX2a(1) <-----------GT1     <---------ANAC58   <---------ANAC58 --->At4g35610       <---------AHL20(2)     --------->YAB1<---------YAB1    <-----------GT1   acaccaaatcttcatctttctattttctttcctctctgtattacaaaaataactttattttttattgtttcttgaatataacaaaattgcttcttctcac  18206500                                                                    <---------ANAC46                                                               <---------MYB46(3)                                                              --------->ALFIN1      --------->ATHB12                                                            <-----------RAV1(1)    <-------TEIL                                                            ===============================MYC_MYB  -                                                            <---------TGA1a       <--------P       --              ------->TEIL                                  --------->TGA1a    <---------TOE2(3) ----             <---------CCA1(2)                              <---------O2  <XXXXXXXXXXXXXXXXXXXXMIR162A/B    --------->ANAC46                    <---------ZAT6      --------->O2 ------->TEIL    <---------ANAC46   tctctccctcaacttgtacctttggaccagtactatatagtagtgtttatgtagagacactcatgtgggtgagtgtatgtagaggttgatggggtataag  18206600                                               <---------TOE2(3)                                               <---------TOE1(3)         ----------->GT1                       <---------TOE1(2)        <---------------AtSPL8             --------->At4g35610       --------->DAG2                      --------->ZAT2    <----------DOF2             --------->ATHB12     ---------->DOF2                   --------->ANAC58    ---------->ID1    ------>ZmHOX2a(1) -------->ZAT18       --------->ALFIN1 --------->ANAC58<----------DOF2   ------>ZmHOX2a(1) ------->ALFIN1       <-----------RAV1(1)  <---------At4g35610     <-----------GT1    <---------ANAC58 ----->ALFIN1  --------->YAB1<----------DOF2   <---------TOE2(2)  <-----------GT1     <---------ANAC58   tgtgggcaaaagggtaagaataatgtgttggctttatagataagcagcttaggtttcctttgtcttttttaactccttcctctcattttcttgatttgat  18206700                                                                     ------>ZmHOX2a(2)                                                                    *TSS            --------->ANAC46                          <------NtERF2                            --------->ARR11(3) <---------ZAT18               <----------DOF2                  <---------AtMYB61  <---------AGP1   --------->LBD16              <---------ANAC58     <---------ANAC58              ----------->ARR10 <---------LBD16              <---------ANAC58     <---------ANAC58     <---------ALFIN1          <---------LBD16          <----------DOF2------>NtERF2    <---------AtMYB61<---------LBD16     <---------GLK1(1) ----   agctactctctcctttgctttcaatgcccccaaattgacttgttttggttttggtttcacacccggtttgatctggtttagaattcagggaacttaaaca  18206800                                                                                               <-----                                                                                      --------->ATHB51                                                                                     <---------YAB1                                                                                    <---------AHL20(1)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                   --------->YAB1                                                                                  <---------YAB1-----                                                                                <---------RVE1(1)          <--------P                                                            <---------CCA1(1)       --------->LBD16                              --------->AHL20(2)         <---------ARR14(2)      <---------ANAC46     --------->ARR14(2)       <---------AHL20(1)         <---------ARR11(3)      <---------LBD16      <---------ARR14(2)       <---------AHL20(2)         --------->ARR14(2)     <---------LBD16--------->WOX13(1)             --------->AHL20(2)          --------->ARR11(3)   -    --------->MYB52(1) --------->YAB1            --------->TOE2(3)         <------NtERF2<---------WOX13(1) ------>DOF2      ------------>CBF     --------->YAB1                   <------ZmHOX2a(1) --------->ATHB12   aaagcataccgggtatgtaagtcaattagtatacgttttaatcacaaattacattaaatttcggtttcatagaaggaggcagatattataattgatagga  18206900                           --------->MYB46(2)                           --------->MYB52(2)                           --------->MYB59                                     <---------At4g35610                           ----------->GT1                               <---------MYB46(3)                         <---------MYB52(1)                             <--------P  --------->RAP2.6(3)   ------------>MYB.PH3(2)                     <---------WOX13(1) --------->MYB52(1)    <---------TOE2(3)      <---------AHL20(2)  --------->ATHB12                 -- -ZmHOX2a(1)      --------->ATHB12            --------->AHL20(2) <---------AHL20(2)                <- ---->ARR11(3) --------->YAB1 <---------AHL20(2)    --------->ZAT6<---------AHL20(2)        <-------- ---------->HVH21<---------YAB1              --------->AHL20(2)  --------->AHL20(2)     ---------->ID1   acttgacggtagtactagtatgattaagttagttaatttttgtttcatttaataacactgagaactattaattggtagttaagctcatttgtttctttag  18207000                                             <---------AHL20(2)                                         <---------AHL20(2)                                       --------->ANAC55(2)                           --------->AHL20(2)                                       <---------ANAC55(2)               --------->YAB1                                   --------->AHL20(1)                   --------->ICU4 ------->AHL20(2)                --------->AHL20(1)         <------ZmHOX2a(1) ------->TEIL     ------ --------AHL20(2)                <---------AHL20(1)  ------->TEIL     --------->YAB1 <---------AHL20(2) --DOF2                 <----------DOF2----------->GT1     ----------->GT1 <---------YAB1      <-----   tttaaatgagtcttaaactcttaatgctttagaaaaatattatgtaatttatacgaatgtaaggaaaaacaaaaatgatgaatcagtttaattgtttctt  18207100                ---------->DOF2             <---------ANAC55(2)             ----------->GT1      --------------->AGL15      <---------------AGL15     <-----------------AGL1     <-----------------AGL2                                          --------->DAG2     ----------------->AGL1                <---------TOE2(3)        ---------->DOF2         <--------     ----------------->AG                  <---------TOE1(3)     --------->ZAT18  <---------------AtSPL8     <-----------------AG             <----------DOF2        --------->DAG2       --------------->AtSPL8   <-----------GT1       <---------HSFB2a(2)                ---------->DOF2    <---------AHL20(2) --------------->WRI1    --------->HSFB2a(2)        --------->HSFB2a(2)       <---------AHL20(2) -----DOF2  --------->MYB59    --------->ALFIN1     <---------HSFB2a(2)       --------->AHL20(2)   ttatattaccgaaataggtaaagaggcctagaagtgggaacttttaaggctcttatggaagaaaaagtgcaaaagtggaatttaatagtacaatcttttt  18207200                                                                                           --------->DAG2                                                                                          --------->DAG2                                                        --------->AHL20(2)               ---------->DOF2                                                 <----------ID1                <---------TOE2(3)                                        <---------AHL20(2)                    ---------->DOF2                                        --------->AHL20(2)                   <---------AHL20(2)                      <---------At4g35610        --------->ANAC58        <---------------AGL15  <----            <----------DOF2            --------->AHL20(2)    ----------->GT1 --------->AHL20(2)<----- --DOF2<-------TEIL   --------->At4g35610        --------->ANAC58        --------------->AGL15-------   ggtctaaaattcatctttttagtcagatgctagttaatctaattaatagaaacgacaaaaaaatcgaaataaaaactaattaaagaaatggaaaaggtgg  18207300  Previous    Next  AGI:  At4g39070.1    Description:  zinc finger (B-box type) family protein. similar to STH2 (SALT TOLERANCE HOMOLOG2), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G75540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47225.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926) Range:  from: 18204849    to: 18206768    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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