Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------TCP16(1)                                                                      --------->PCF2                                                                      --------->PCF5                                                                     ------>NtERF2                                                                     --------->ATERF1(1)                        --------->ZAT14                              <------NtERF2                        <---------ZAT14                             ------>NtERF2                        <-------TEIL                                <---------ATERF1(1)                    --------->DAG2                                  --------->ABI4(2)            <---------ALFIN1                                       <---------ANAC58          ----------->RAV1(1)                         <---------ANAC58<---------PCF2          --------->DEAR3(1)              --------->ALFIN1         <---------ANAC58          <---------ALFIN1              --------->O2  ----------->GT1<---------ATERF1(1)       --------->ANAC46--------->ALFIN1 <---------O2  <---------ANAC58<---------PCF5    --------->DAG2  <---------TOE2(3)   <---------bZIP60(2)   --------->MYB52(1)          <----------   ---------->DOF2  <---------TOE1(3)   <---------ANAC46----------->GT1         <----------DOF2   tcccataaagcgccacacagttaaggtgcagagagaagaacgacgtgttgttttaagcgtgaaaaaacggcgggccctctgtcttttctatttctctctt  18121100                                                                                --------->O2                        --------->ANAC58                                        --------->TGA1a                       <---------LBD16                                          =====================                      --------->MYB52(1)       <---------At4g35610      --------->ALFIN1                 <---------ZAT18               --------->At4g35610    <---------ANAC46                 <---------ZAT14             <-----------RAV1(2)    --------->YAB1                 --------->ZAT14          --------->MYB52(2)       <---------ATHB51                 --------->ZAT18        ==================================================MYC_MYB           <------ZmHOX2a(1)           <-------GAMYB               <---------ATHB12          ----------->HVH21         <---------ANAC46             --------->WOX13(1)  <---------ALFIN1   ----------->HVH21----------->GT1          <---------YAB1   <---------O2 -GT1   <---------AtLEC2--------->ANAC58<--------P         <---------GLK1(2)    <---------TGA1a   ctcaacacttgcaggacagtgccctcacggataatatggagggttagtcagatggataatggattatcaattatgtgtagccacttggctacttgactca  18121200                                                  <-------TEIL                         <------MYB46(1)          ------->TEIL                         <------MYB83          --------->ANAC58                      --------->REM1(2)        --------->ANAC58                     --------->ALFIN1         <---------TOE1(2)                --------->ALFIN1             <---------ALFIN1              <---------At4g35610         --------->PCF2            <-----------RAV1(2)           <---------TCP15(1)        <----------DOF2 --------->MYB59  <-----------HVH21 <---------ANAC46  <---------ANAC46   --------->DAG2                   ---------->DOF2      <-------- ==================bZIP_DOF          ---------->DOF2    --------->At4g35610      ------->TEIL   gtgacttagacttttcaggtgctgtgtaggtatataacataaaggtcccacgtacatcatctacataccattccaaagagatgtatatgtgccatcgaca  18121300                                                                              <---------YAB1                                                                             <-----------GT1   ------                      <---------MYB46(3)                                    --------->YAB1     ------           --------->ZAT14                                                 --------->ICU4      ------           <---------ZAT14                  <---------YAB1                 <---------ATHB12--------->ANAC58           --------->ZAT18             <---------ZAT6      --------->CCA1(2)<---------ICU4 --------->ANAC58 -ETT(2)   <---------ZAT18 <---------MYB52(1)      <----------DOF2      <---------AHL20(2) --------->AtLEC2   atttcatgtgaagtgcgctcgaagttgttgttagtcttctagtgtcatgaattcttttcagatataatccatattcaattatcagtttataacatgcaag  18121400                                                                                        --------->ARR11(3)                                                                                        <---------AHL20(1)                                                                                        --------->AHL20(1)                                                                                       <---------AHL20(2)                                                                                       ----------->TBP                                                                                     <---------AHL20(2)                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <---------ANAC58                              <---------ALFIN1                              <---------MYB46(3) <-----      --------->O2         --------->PCF2                                <------------CBF <---------- --->ANAC58             ------->TEIL             --------->MYB52(1)  --------->ANAC58--------->AHL20(2) --->ANAC46            <---------AtLEC2          <---------ALFIN1    --------->ANAC58<-----------TBP --->ANAC58          <---------YAB1             --------->ZAT18<---------ANAC55(2) ----------->TBP   acagagccatgtgaattcttcttatgcatgtcccactcttgtataagaagcccacggtttctatcacatgaacgaaattggttgtatatatatattgcat  18121500                                                                                         --------->At4g35610                                                                                         --------->ZAT14                                                                                         <---------ZAT14                                                                                   <-----------HVH21                                                                                  --------->WOX13(1)                                                                                 <-------TEIL                                                                               ----------------------                                                                               --------->ARR14(2)                                                                               <---------ARR11(3)                                                                               <---------ARR14(2)                                              ---------->DOF2               --------->LBD16                    *TSS                      --------->MYB52(1)           --------->HSFB2a(2)        <---------ANAC58                   --------->At4g35610    ------->TEIL<------ZmHOX2a(1)        <---------ANAC46                  --------->ANAC58   --------->ZAT2<---------LBD16     <---------CCA1(2)                    --------->ANAC58   <---------At4g35610 ------>ZmHOX2a(2) -------CBF   --------->YAB1         <---------YAB1          --------->At4g35610<------ZmHOX2a(2) --CBF  <---------ANAC58      <---------At4g35610            <---------ZAT2<---------HSFB2a(2)     --   tgttttcatatcgtgagcataacaacttcttcatctaatctgataagctaaaggagacttctaagctgaatctttttccaggatccatcagagcagaaca  18121600                                         <----------DOF2                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                  ---------->DOF2                                      --------->ARR14(3)                --------->AtMYB61                  <---------ARR11(3)  <---------AGP1          --------->HSFC1(2)               --------->LBD16        --------->ARR14(2)      <---------HSFB2a(1)            ------->TEIL              <---------ANAC46        <---------ARR11(3)      --------->ZAT2               <---------ZAT18              <---------TOE1(1)       --------->ARR11(3)      --------->HSFB2a(1)          <---------ZAT14         --------->HSFB2a(1)          <---------ARR14(3)      <---------ZAT2               --------->ZAT14         --------->ALFIN1             <---------ARR14(2)      <---------HSFC1(2)        <---------ANAC46         <---------HSFB2a(1)   ---------->DOF2                <---------At4g35610  <---------ANAC58         <---------ZAT6       <------NtERF2                   --------->At4g35610  <---------ANAC46 -->ANAC81<---------ZAT14  --------->ZAT18                    <------NtERF2       --------->MYB52(2) ------->AHL20(2) --------->ARR11(3)----------->ARR10<------ZmHOX2a(2)------>NtERF2<---------ANAC58   aaaaaatgggagtgttccgaggtcttatgggcgcaaagaagatctttcaaggtcgatcaatggcagcttcgacaccaaaagggtttcttgcagtgtacgt  18121700              ---------->DOF2         <---------At4g35610         --------->At4g35610       <-----------RAV1(2)                      ------>MYB83               <---------ARR14(2)    --------->ANAC58                            ------>MYB46(1)       ----------->GT1    --------->ANAC58<-------TEIL             --------->MYB46(3)       <---------ANAC46  ---------->DOF2  --------->CCA1(2)       <-----------GT1     <----------DOF2   tggagaaagccagatgaaaagatacatagtgccagtctcatatttgaaccagccttcatttcaagctttgttgagtaaatctgaacaagagtttgggttt  18121800                      ------>MYB46(1)                      ------>MYB83                    --------->AtMYB61                            <-------TEIL                 <---------WRKY18(1)                          <---------At4g35610                ----------->HVH21                   <---------MYB52(1)              <---------ANAC58                     <-----------TGA1              <---------ANAC58                    --------->ANAC46--------->ATHB12             <------NtERF2                        --------->DEAR3(1)            <---------DEAR3(2)                  <---------At5g28300      <------ZmHOX2a(2)       ----            ------>NtERF2                   --------->YAB1    --------->At4g35610       <------ZmHOX2a(2)           <---------DEAR3(1)          <-------TEIL<-----------HVH21    --------->AGP1--------->YAB1           <---------RAP2.6(2)        --------->CCA1(2)       <---------ZAT2        --------->ANAC58           <---------RAP2.3(2)<---------ANAC46 <-----------GT1--------->ZAT2        --------->ANAC58<   gatcatccaatgggcggcttgaccatcccttgccctgtagatacatttatcaccgtcacttctcagcttcattagatccaattcacaaggatcacatata  18121900                                                <---------At4g35610                                                <---------ZAT2                                   <---------RVE1(1)                                   <---------CCA1(1)                                  <---------ARR11(3)                                  <---------ARR14(2)      --------->AHL20(2)                          <---------REM1(1)     --------->ZAT2           <---------TOE2(3)      --------->ARR11(3)      <---------AHL20(2) ----->ANAC55(2)  <---------AHL20(2)            --------->At4g35610                                <- -----------GT1   --------->AHL20(2)          <-----------RAV1(2)    *TSS    --------->TOE2(3)<------   tgtaacaatttttgaggtcattaattagatgtagaagatatttagaacccagctgtgtaattacttacatagaagataacatttatcgtctgatatttgc  18122000  Previous    Next  AGI:  At4g38825.1    Description:  similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G18030.1); similar to auxin-induced protein-like [Brassica rapa] (GB:ABL97983.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 18121520    to: 18122004    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g38820.1    Description:  unknown protein Range:  from: 18121537    to: 18121969    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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