Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------TOE2(3)                                 <---------At5g28300                                 <-----------------AG                                 <-----------------AGL1                                <-----------GT1                                                    <-                       --------->DAG2                                                          ------                   --------->ANAC58                                      <---------YAB1     ---------  ----------->RAV1(1) ---------->DOF2                                   --------->AHL20(2)<---------YAB1 -----------AtSPL8 --------->ANAC46                                   <---------YAB1   <---------AHL20(2) ---------->AtSPL8 --------->ANAC58      ----------->GT1   --------->MYB52(1)    <----------DOF2   -- -RVE1(1)          --------->LBD16<---------TOE1(3)      <---------MYB52(2)<---------AHL20(2) <------   tgtacaacaaaaaaaaaacacccgaaaagtatttttacggttttggtaaaaatacaaaaacaaacggttcttaatattatatgctttattttatcaatca  18116700                                                                <---------AHL20(2)                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                           --------->AHL20(1)                                                           --------->AHL20(2)                                                        --------->YAB1      <---------TOE2(3)                               <---------AHL20(2)                      <------NtERF2 <---------AHL20(2)         --------->GLK1(1)       <---------AHL20(2)                     <------ZmHOX2a(1) --------AHL20(2)        <------ZmHOX2a(1)       --------->AHL20(1)               <---------MYB46(3) --->YAB1               ----------->GT1          <---------AHL20(1)               --------->MYB52(2) >WOX13(1)             --------->MYB59  --------->MYB52(1) <---------AHL20(2)     <---------DEAR3(1) ------->AHL20(2) --------->AHL20(2) --------->TOE1(3)--------->AHL20(2)          --------->MYB55(2) ---ATHB12    ----------->GT1--------->GLK1(2)  --------->AHL20(2)  --------->MYB59<-------GAMYB   tataaatttagatttgaagttaaattaggaaaatccatagcttaacagaaatatataaaaataaaataaataggtacccatgggtcgttggaaggaggca  18116800                                                      <---------ANAC58                                            <---------ANAC55(2)                                <---------------------WRI1 ------>ZmHOX2a(1)                                <---------TOE2(3)     <---------ANAC58                         --------->ARR11(3) --------->ANAC55(2)                     <---------ZAT14     <---------ATHB12 <---------ANAC58            ---------->DOF2   ----------->HVH21      <-------TEIL       --------->ZAT18           >>>          ------->GAMYB  <---------ARR11(3) --------->ANAC46            <---------ZAT14 --------->GLK1(1)       ----------->RAV1(1)  <----------DOF2<---------LBD16<---------ANAC58             --------->ARR14(2)   ttccatgatcaacagaaagagactggagagctttgacgatacaatcacggagcgatgcgtccttgctactggagagctctgagaaaacagaaatgctctc  18116900                                          --------->ORA47(1)                                         --------->DEAR3(1)                                      <---------ALFIN1                                     =====================================HOX2a_HOX2a                                     ------>ZmHOX2a(1)                                   ======================HOX2a_HOX2a                                   ------>ZmHOX2a(2)                                   =====================================HOX2a_HOX2a                                   ==========================HOX2a_HOX2a                                  <------ZmHOX2a(2)                                  ===========================HOX2a_HOX2a                      -------                                  =======================HOX2a_HOX2a                          ------>MYB46(1)                                 --------->ARR14(2)                               --------->ZAT2                                 --------->ARR11(3)                   --------->ANAC55(2)     ------>MYB83                 <---------ETT(2)--------->ARR14(3)               --------->ARR11(3)        <--------              <---------ANAC58   <---------GLK1(2)               <------ZmHOX2a(1)<---------At4g35610              <---------ANAC46   --------->AGP1         ----------->TGA1          <---------ZAT2             <---------DEAR3(1)  <---------ARR14(2)   ====================HOX2a_HOX2a       ---------         --------->LBD16         <---------ARR11(3)   <------ZmHOX2a(1)           --------->At4g35610     <---------ARR14(2)         <---------GLK1(1) ------>ZmHOX2a(1)   <---------ANAC55(2)  --------->ANAC58     --------->ARR14(2)         --------->GLK1(1) ========================HOX2a_HOX2a      --------->ANAC58    <---------CCA1(2)       --------->LBD16 --------->SPL7 <---------YAB1<-----------HVH21 --------->ANAC46 >>>>>>>GATA-1<---------ANAC58 ----------->ARR10----------->RAV1(2)<------ZmHOX2a(2)--------->RAP2.6(2)   gatttcatatccagggccgtggacaaactccgagagatcctcaccgtccatcctgaggatgacgataggatcacgtttcagaccagcagccatacccaac  18117000                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                      <----------DOF2                                    --------->YAB1     <---------ETT(1)                 <---------DAG2                                 <---------AHL20(2) ---->RAV1(1)                <---------ANAC58                <---------ARR14(2)   ----------->GT1 -MYB59          <----------DOF2  <---------ZAT18      --------->ATHB12    ----------->GT1<---------AHL20(2) >MYB46(3) <---------ALFIN1  <---------ANAC58  ---------->ARF1         <------ZmHOX2a(1)<---------YAB1   aaaatgtccgacaacacttctttgaactctgtcttgctcactttctcttgactcccatgagtgaattcgtttaggacctgtatatagtttattataacgt  18117100                                                                                                    -                                                                                 ---------->DOF2    -                                                                               --------->AtMYB61    -                    <---------LBD16                                           --------->ANAC46      <                    ------->TEIL--------->At4g35610                         --------->ANAC46 ------>MYB46(1) ---->GT1       <---------------AtSPL3    --------->ATHB12            <---------AHL20(2)     ------>MYB83 --TOE1(3)      <---------------AtSPL8  <-------GAMYB                 ----------->TBP        -------- --TOE2(3)   --------->AHL20(2) <---------ZAT2   *TSS                 --------->AHL20(2)    --------- ---GT1      <---------AHL20(2) <---------At4g35610                 <----------DOF2        <---------MYB59   tacaaacgatgaaaaataaatgtacggataagacagctagagggttattggtttaatctcgttgtctcttctttaaatacaccaaaagctaaacctaacg  18117200         <---------ARR14(2)         --------->ARR14(2)    <------------CBF                                                                 <---------ICU4   --------->ATHB12                                                            --------->At4g35610  <---------AHL20(2)                                                           <---------At4g35610 -------->ANAC58                                                      --------->ARR11(3) -------->ANAC55(2)                              --------->ARR14(2)   <---------ARR11(3) -------->ANAC58     --------->ARR14(2)<-------TEIL <-----------GT1  --------->GLK1(1) ---------ANAC55(2)  <---------ARR14(2)<-----------------------TaNAC69(2)<----------DOF2 ->MYB52(1)         <---------CCA1(2) --------->GLK1(2)              <---------CCA1(2)       -------- >MYB55(1)    --------->ATHB12       <---------GLK1(2)               <---------GLK1(1) <----------ID1   ataagtaattggatactgatttgtatccactaagagagagattcgtattcagatttactacttcttcttggatatctttgcagctaataactacaaatct  18117300                                  <-------MYC3                                  ------->PIF5                                  <-------PIF5                                  ------->MYC2                                  <-------MYC2                                 --------->bZIP60(2)                                 --------->TGA1a                                 --------->ANAC46                                 --------->ANAC55(2)                                 <---------TGA1a                          <---------AHL20(2)                          --------->AHL20(2)          --------->ANAC58                      --------->AHL20(1)              --------->ANAC58                   <-----------GT1                      <---------AHL20(2)    --------->ANAC46                         <---------AHL20(1)                      --------->AHL20(2)  --------->AtLEC2                        <---------AHL20(2)                      <---------AHL20(1) --------->TOE1(2)        --------->GLK1(1)  --------->AHL20(1)          ------>ZmHOX2a(1)      <---------O2         --------->ANAC55(2)         --------->AHL20(2)          ==============HOX2a_HOX2a    <-------TEIL   ----------->GT1      ----------->GT1 <---------ATHB12------>ZmHOX2a(2)------->MYC3        <---------ANAC55(2)  <---------ETT(2)<---------YAB1 ->ARR14(2)    <---------ARR11(3)--------->O2      --------->ANAC46   <---------AtLEC2<---------ICU4   acaatcaatgtcctcttgatctaattaattaatccacgtgattcatgcgaaacacgacgtaatttggggtttccatgtcgataaaaaaatattactattg  18117400                                                                   <----------TaMYB80              <-                                                                   <---------GLK1(1)               <-                                                                  <---------ARR14(2)              <--                                                   <---------TOE2(2)                      <-------GAMYB                                                   --------->SPL7 --------->ARR14(2)    <---------ANAC46                  --------->ZAT18                  <---------TOE1(2)--------->KAN4(2)   <---------ANAC58                  <---------ZAT18              <---------------AtSPL3              --------->MYB52(1)      <---------ANAC58                         --------------->AtSPL3             <---------ARR14(2)      <---------ANAC58                         --------------->AtSPL8  ----------->GT1  <---------ANAC58    <-----------GT1  --------->ANAC46     --------->YAB1    <-----------RAV1(1)  <------ZmHOX2a(1)<--   tacttgtaacttgtttttggtccactaaatagtttttgtgatactcatactcgtacgtttttttgttggatattcgtaaaataggaaacggcgtttgatt  18117500      <---------GLK1(2)                                                          --------->ANAC58 ----------TGA1                         --------->CCA1(2)                        --------->ANAC58 ----------HVH21            ----------->GT1                           ---------->DOF2 -------ANAC58           <------ZmHOX2a(1)    --------->ARR11(3)    --------->ANAC58                - -------ANAC58 --------->ICU4      ----------->GT1                  --------->ANAC58      <----------   tcgtcacagattatgtcataaataagaggattgaaaaatgtgatatgggatattgtttttaaaaaatgtcaagaaagtcttgaacgaaaatgaaacctta  18117600  Previous    Next  AGI:  At4g38810.1    Description:  calcium-binding EF hand family protein. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28830.1); similar to 39 kDa EF-Hand containing protein [Solanum tuberosum] (GB:CAA04670.1); contains domain EF-hand (SSF47473) Range:  from: 18115277    to: 18117149    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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