Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <-----------GT1                                             <----------DOF2                                           --------->HSFB2a(1)                     <----------DOF2      ------->TEIL             ------>MYB46(1)          --------->HSFB2a(2)             ------>MYB83---------->ID1--------->LBD16                               <-----------HVH21 -----ZmHOX2a(1)<----------DOF2       <---------HSFB2a(2)               <---------DAG2             -- --->ICU4  --------->AtMYB61         <---------LBD16                 <-----------GT1================= --HVH21   <---------MYB59   <<<<<<<<<WRKY18<---------DAG2     <----------DOF2      ------>ZmHOX2a(2)   aggaatattaagaccaaactttcctttgtcgtcaatgtttcccgaaccttttgtaacaaaatggcctttattcaccttacagtcgatcgtcactcgaagt  18098200                                                                                   <---------YAB1                                                                         <---------TOE2(3)                                                                      <---------AHL20(2)                                                                      <---------YAB1                                           --------->AHL20(2)       <---------RVE1(1)                                --------->ARR11(3)                  <---------CCA1(1)         --------->AHL20(2)     --------->AHL20(1)                 <---------AHL20(1)         --------->YAB1         <---------ARR11(3)                 --------->AHL20(1)  --------->YAB1              --------->AHL20(1)        <---------------AtSPL8   --------->CCA1(2) ---->ZmHOX2a(1)              <---------AHL20(1) <-----------GT1   --------->ARR11(3)              <- =====HOX2a_HOX2a            --------->AHL20(2) --------->AHL20(2) <---------ARR11(3)      --------->TOE1(3)   cctataacaaataatatcacacattgatcaaatatatattcacaaaaaaataaactatatagtacataagatattaatgtaagttatgagatacctgaaa  18098300                                 --------->DREB2C(2)                                 <---------ETT(1)                                --------->MYB46(3)                                            <------ZmHOX2a(1)                              --------->MYB52(1)                                   ----------->RAV1(1)                              --------->ARR14(2)                                  --------->At1g77200                              <---------ARR14(2)                                  --------->DREB2C(2)                             ----------->HVH21                                    --------->DEAR3(1)                ------>ZmHOX2a(2)------->GAMYB------>NtERF2                       ----------->HVH21              <---------ARR11(3)--------->DEAR3(2)                                <---------ETT(1)---     <---------ANAC46     <------NtERF2      --------->ANAC46                    --------->DEAR3(2) ------TEIL   --------->ARR11(3)<------------AtMYB77                             --------->MYB46(3)   atgcatggggggttttgatcttgctctcggcgtaaccgacaacttcgacgacacgagcgagtgagagagtcgctgataagagaaccgacacaagaaggag  18098400                                    --------->ATHB12                                 ------>ZmHOX2a(2)            ------->TEIL        <------ZmHOX2a(2)            --------->SPL7     <---------ARR14(2)           ------>MYB83        --------->ARR14(2)           ------>MYB46(1)     <---------ARR11(3)           --------->ARR14(2)  --------->ARR14(3)         <---------MYB59       <---------ARR14(3)        --------->DEAR3(2)     <---------GLK1(2)      <---------ARR14(2)       --------->ARR11(3)      --------->ARR14(2)     ----------->ARR10   --------->ANAC55(2)     <--------P   --------->ANAC58     <---------HSFB2a(2)     <-----------GT1   --------->ANAC58  --------->ARR14(2)    <---------GLK1(2)                         --------->At4g35610   <---------ANAC55(2) <---------ANAC46    --------->ARR14(2)                   <---------ANAC58   --------->ANAC55(1)<-------TEIL ------>ZmHOX2a(1)        --------->GLK1(1)   <---------ANAC58  ---   --------->ANAC46  --------->ALFIN1--------------------->WRI1      <---------ALFIN1<---------At4g35610  <---------LBD16    <---------ARR14(2)    <---------ARR14(2)   ----------->HVH21 <---------MYB52(1) -------->ARR10     <---------SPL7 <---------YAB1           <---------GLK1(1)<----------DOF2    -----   aagacacggaaccgaacctcgaggttcgggtaagatcctcattgggattctcaccctctgagatttctgacacacttccctttcgtttgctgaaaatata  18098500                                                          --------->YAB1          <----------ID1                              --------->ICU4     --------->YAB1                                   <---------YAB1    <---------YAB1                                  --------->CCA1(2) <---------YAB1                             <------MYB46(1)*TSS                     <---------AHL20(2) ------>ICU4                                <------MYB83 <---------YAB1         <-----------TBP<----- ----->DOF2                      <---------YAB1  <---------YAB1                 --------->AHL20(2)   aagattataagaagaacaaaaacaaactatagagtattagtggggaaggtgatgatatgattatagtgagacttcttctcgtttatataatggtcttatc  18098600                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                            >>>>>>>>>>AGL24                                                                            >>>>>>>>>>AGL22                                                                            >>>>>>>>>>AGL20                            <-----------GT1                                 --------->ATHB51                            <---------AHL20(2)                              <--------ATHB1                         <--------HAHB4                                     <---------ICU4                         <---------ICU4                                     --------->YAB1<-------GAMYB                         -------->HAHB4                                     -------->ATHB1--------->ATERF1(1)                         --------->ATHB51                                   --------->ATHB12     <---                         <--------ATHB1                                    <---------YAB1--------->ABI4(2)                        <---------YAB1       <---------TOE2(3)             <---------ATHB12--------->ARR14(2)                        --------->ICU4       <---------TOE1(3)             <---------ATHB51<---------ARR14(2)                        <---------ATHB51    --------->MYB52(1)             --------->ICU4<---------MYB46(3)              <---------WOX13(1)            <-----------GT1              --------->YAB1  <---------ATERF1(1)             <------------CBF               <---------DOF5.7(2)         <-----------------AGL3 ------ <---------GLK1(2) ----------->GT1     --------->AHL20(2)              ------>MYB46(1)  <---------DEAR3(1) --------->ARR11(3)--------->YAB1  --------->LBD16                     ------>MYB83  <---------DEAR3(1) <---------ARR11(3)------>ZmHOX2a(2)   <---------AHL20(2)             ----------->RAV1(1)<---------DEAR3(2) ----YAB1  <---------YAB1--------->YAB1--------->AHL20(1)         <-----------GT1 <---------GLK1(2)<-   aaagatttttctgaagattgatcgtaataattacttccgaattaattaacgtttagttttttttttttttaccaacaataattggattcggcggttccta  18098700                                                                                <---------CCA1(1)                              <-----------TGA1                                  <---------RVE1(1)                              <---------RAP2.6(3)                     <---------ALFIN1                             <---------bZIP60(1)                   --------->ANAC46                             <---------ETT(2)                      <---------RAP2.3(2)                       <---------AHL20(2)                         <---------LBD16                 <--                      --------->AHL20(2)                         <-----------RAV1(1)             <---                   <---------AHL20(2)                      <---------ANAC58    --------->ARR11(3)----          <---------ANAC58   --------->bZIP60(1)           <---------ANAC46    <---------ARR11(3)<---          <---------ANAC58   --------->ETT(2)              <---------ANAC58   --------->YAB1     ----        <---------ANAC46     <---------TGA2(1)          <----------DOF2      <---------YAB1      <--- ------YAB1        --------->AHL20(2)                  <---------ANAC58  <---------DAG2         <---- >ZmHOX2a(1)<---------CCA1(2)--------->TGA2(1)         <---------ANAC58  <----------DOF2        ----- --------AHL20(2) --------->AHL20(2)                 <-----------GT1 <------NtERF2       --------->AtLEC2   ttattttgtattgtgtatcatttatttaatgtcgtcatggtccatcttctcgttgttactttcgtctatgcggcactttatgatatttttcatgcagggt  18098800                                     ------->GAMYB                                  --------->MYB52(1)                                            ----- -----GAMYB                   <----------ID1                                                 <------- ---MYB83                     --------->ANAC58                                               <------- ------->GT1            ------>ZmHOX2a(1)        <---------AHL20(1)                         <-------- ------MYB46(3)        --------->TOE2(3)         --------->AHL20(1)               --------->ANAC58 ----->MYB55(2)        --------->TOE1(3)         <---------AHL20(2)               --------->ANAC58 ---MYB46(1)        <-----------GT1 --------->ANAC46                              --------->ANAC46 -----AtMYB61 <----------DOF2 --------->ANAC46   --------->AHL20(2)      --------->TOE2(3)  --------- ---->ALFIN1  <---------DAG2  --------->ANAC58  --------->AHL20(2)     <---------TOE2(3)    ---------   ggttgaaacacattgacttttttttccttaatacgacaacggcattcaaattttattttttgtttccctcatcaacgttattgcacgagacatatgcgta  18098900                                  ----------->GT1                                 <---------YAB1                          --------->LBD16 --------->AHL20(2)                         --------->ANAC58 --------->AHL20(1)           --------->ANAC58      <---------TOE2(3) <----------DOF2         --------->ANAC58 <---------YAB1 ---->SPL7 --------->ANAC46   --------->ARR14(2) --ANAC58  --------->ANAC55(1)<---------ARR14(2) --ANAC58  --------->ANAC58   --------->ICU4    <---------YAB1                  <---------DAG2 -------AtSPL8           --------->ANAC46 <---------AHL20(2)                --------->ARR14(2) ------>AtSPL8          ------>ZmHOX2a(2)<---------AHL20(2)                 <---------ARR14(2)     <- ------>AtSPL3          <---------LBD16  --------->AHL20(2)    <------ZmHOX2a(1)<----------DOF2  <---   caacttttgacacacgaaacttttgatccgcaaatatggttaattttattgttatagagattgcaggatgagcatgcatatactttttttttgtttcaca  18099000                                                        -------->P                                                        ------>MYB46(1)                                                        ------>MYB83                                                       --------->MYB55(1)                                                      <---------ALFIN1                                                      <---------MYB111(2)                                                      --------->DEAR3(1)                                                      --------->AtMYB61                                                      --------->MYB46(3)                                                      <---------MYB46(2)                                             --------->ANAC46       <---------MYB46(3)                 --------->ARR14(2)      <---------AtMYB61                   <---------ARR14(2)      <---------YAB1                      <---------ZAT14      <---------TOE1(3)                 --------->REM1(2) ------->GAMYB      <---------TOE2(3)              <---------ANAC58 <---------MYB111(1) --------->ANAC58                    <---------ANAC58 <---------MYB55(2) --------->ANAC58                    <---------ANAC46--------->MYB46(3)           <---------TOE2(3) --------->ANAC46            --------->WOX13(1)    <---------ALFIN1               <---------TOE1(3) --------->ANAC55(1)        <---------AHL20(2)   <---------ATERF1(1)      <------ZmHOX2a(2) --------ALFIN1             --------->AHL20(2)   ------>NtERF2       <---------At4g35610 ------ALFIN1  ---------->DOF2  <---------ICU4  <---------TCP20   ---------->DOF2 <---------YAB1   cacacgctatggttgaaaaaagaaactgaattaatcagtgcgtgtatacggctccaccaacccaaaattgaagcggatcacattatggttagaagagaaa  18099100  Previous    Next  AGI:  At4g38770.1    Description:  PRP4 (PROLINE-RICH PROTEIN 4). similar to ATPRP2 (PROLINE-RICH PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT2G21140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47331.1); contains InterPro domain Protein of unknown function DUF1210 (InterPro:IPR010616) Range:  from: 18096803    to: 18098559    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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