Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->DAG2                            ---------->DOF2    <---------AHL20(2)   <----------ID1       --------->ANAC46              <---------ZAT14 <---------TOE2(3)  --------->ATHB12          --------->ANAC58        --------->YAB1               <- -->ZmHOX2a(1)      --------->YAB1            --------->ANAC58        --------->ATHB12       <------- -------DOF2       <---------YAB1             --------->ANAC55(2)    <---------YAB1          <------- --->ID1           --------->ICU4         <---------ANAC55(2)  ---------->DOF2    ---------->DOF2  --   ttttatgttattgatatggccatgatagcgaaaagctccataatacataagtaacaaattacagaaaaagaatgatagcatactgaaagagtatttcttg  18095200                                                                                   <---------AHL20(2)                                                                               <---------AHL20(2)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                                                              <---------ARR11(3)                                                 --------->ARR11(3)           --------->AHL20(1)                                           ---------->DOF2                    <---------AHL20(1)                                     <---------KAN4(1)               <------ZmHOX2a(1)                                     --------->KAN4(1)              --------->ANAC46  <----------DOF2             --------->MYB52(1) <---------ARR11(3) --------->ANAC58 --------ARR11(3)           --------->MYB46(3)  --------->GLK1(1)   ----------->GT1--------->AHL20(2) --ANAC58     <---------AHL20(2)    <---------KAN4(2)         ---------->DOF2 --------->ARR11(3) --ANAC58     --------->AHL20(2)--------->YAB1  <---------GLK1(1)   --------->ANAC58         -------- ------->ARR11(3)  --------->YAB1   ---------->TaMYB80    --------->MYB46(3) --------->AHL20(2)   agttctttctaagaatttatatcatgaacaacaatcggaatattcaaaagaaatcttctaaccaaaaaacaggaaacaaatatatttaaaaaaacttgtg  18095300                                                                                                  ---                                                                   --------->YAB1             -------                             <---------ARR11(3)                   --------->ICU4              -------                             <---------GLK1(2)           <---------AHL20(2)                   <------             <------ZmHOX2a(2)                           --------->AHL20(2)             ---------->DOF2            <---------ARR11(3)                         <---------WOX13(1)               ============= --->GT1    --------->ARR11(3)--------->GLK1(2)      --------->ATHB12       ----------->GT1  --------   aattctaactcatagatcatcaccttcacaagattctacccatacaacaaaacattgatttatatgcaagaatgaagactgaaaattccaaaaagaagct  18095400       --------->ANAC58       --------->ANAC58   =====================MYC_MYB   --------->TGA1a   --------->ANAC58   --------->O2   <---------TGA1a   <---------O2   --------->bZIP60(2)                                                                 ==============   --------->ANAC55(1)                                                                 ------>ZmHOX2a(2)   --------->ANAC58                                                                   <------ZmHOX2a(2)   --------->ANAC46                                                                   ===============   --------->ANAC55(2)                                                               --------->AGP1   <---------ANAC55(2)                                  <-----------HVH21            <---------AGP1 -------->HVH21                                    -------->P <---------MYB46(3)     --------->ARR11(3) -->ZAT2<---------At4g35610                        --------->MYB52(1)                <---------ARR11(3) -->At4g35610       <-----------HVH21           <---------At4g35610        ==================HOX2a_HOX2a ---At4g35610  -------->P<---------ATHB12       --------->At4g35610        ------>ZmHOX2a(1)      <-- ============bZIP_DOF  --------->WOX13(1)--------->ARR11(3) <---------At4g35610     <---------CCA1(2) ->GLK1(2)  <---------MYB52(2)         --------->MYB52(2)   <-------GAMYB  ===================HOX2a_HOX2a   gagacacgtaagctactaaccatgtcaatgaattcttgagttagttcttgagctaccgagtcagttgttccatattcctgctccatagatctttccacga  18095500            --------->GLK1(1)            <---------GLK1(1)       <---------WOX13(1)     --------->ATHB12                                                              <---------ALFIN1    <---------YAB1                <---------ARR11(3)                            <-----------GT1 ====HOX2a_HOX2a                  --------->ARR11(3)                <-----------HVH21 ====HOX2a_HOX2a       --------->GLK1(2)             --------->AHL20(2)       <-----------GT1 ----ZmHOX2a(1)       <---------GLK1(2)        ----------->GT1     --------->bZIP60(2)  <-------TEIL   ggatgtatgattggatttcatctagattctggccaagatttcaaaaattcagaaaaaaaattcagaaccatgtcagtttttttctccacatccattctac  18095600                                                              --------->ZAT6      <---------ICU4                                    <--------HAHB4      --------->YAB1                                    <---------ICU4                             <-      <--------HAHB4                                    --------->YAB1                            <--     <---------YAB1                                    <---------YAB1                            ----     --------->ICU4                   <-------TEIL     --------->ICU4                         <------   --------->YAB1            <---------GLK1(1)       --------->YAB1                      <---------REM1(2)  <---------AHL20(2)         --------->GLK1(1)      <---------AHL20(2)     <-----------TBP    <------   ttatataatcattttcagaaaacaaattcagaaatccacatccattctacttatataatcattttcactaatacagcatatatatgaagcctacatgctt  18095700                                                                                      <---------ZAT2 --------WOX13(1)                                                              --------->At4g35610 ----------CBF                                                             -------->P <---------At4g35610 ----->ATHB12                     <----------DOF2   <------------CBF    <---------MYB52(2) ---ANAC58                --------->DAG2     <------------CBF          --------->At4g35610 ---ANAC58               ---------->DOF2  ------------>CBF       ---------->DOF2      --------->At4g35610   gattgaagactattttgaaatagatgataaagttttctttcgagttcaattgaaaattgaagagtggaaaagaagctaaccagatgagagctgattcgaa  18095800                                                                    --------->HSFC1(2)                                                        --------->CCA1(2)                                                        <------ZmHOX2a(2)                                                       --------->ARR14(2)                                                       <---------ARR11(3)                                <-----------RAV1(1)    --------->AGP1                              ------>MYB46(1)          <---------ARR14(2)                              -------->P ======================HOX2a_HOX2a              --------->ALFIN1------>MYB83             <---------AGP1                         <------            <------------CBF  ----------->RAV1(2)    ----------->ARR10   <----------DOF2      <------         ------------>CBF    --------->MYB55(1)   <XXXXXXXXXXXXXXXXXXXXMIR865-5P              <------       <----------DOF2      --------->MYB46(3)<---------ICU4        <---------HSFC1(2)       <------NtERF2    <---------ARR11(3)   <-----------GT1 =======================HOX2a_HOX2a    <---------GLK1(1) <----------DOF2    <---------DAG2       ------>ZmHOX2a(1)       ---------->DOF2            <-------- <---------DAG2     <----------DOF2     --------->TOE2(3)------>ZmHOX2a(2)  <---------YAB1  ------>NtERF2   gcgctttatctttcaattggggctttatcaccaactggtgctccttaattttgactagatccgaattcaaagcttcttttgatttctcactcggtggctt  18095900                          --------->ANAC55(2)                         ------->MYC3                         <-------MYC3                      <---------ALFIN1                                                        -------                     --------->MYB46(3)                                                       -------                  ------->GAMYB                                                               -------                 --------->MYB46(3)                                                          --------   --------->ETT(2) ------->TEIL                                                         --------->ANAC46 ---ANAC46       <---------MYB52(2)                                                   <---------ARR14(2) ---ANAC58       <---------MYB55(2)                              --------->At4g35610  --------->ARR14(2) ---ANAC58    --------->TOE1(2)      ------>ZmHOX2a(1)      ---------->DOF2     ----------->RAV1(1) -MYB46(3)--------->GLK1(1)   <---------GLK1(2)   ----------->RAV1(2)      ---------->DOF2  <--------   gaacatcgacagagttccaacgaaccacgcgtgattctcctccaacttcttcgcctgaaattgaaagagcagaccaaaatagcaccagtatcccccacga  18096000                                                                                              <------MYB83                                                                                              <------MYB46(1)                                                                                             <-------                                                                    <---------At4g35610      <-------                                                                    --------->At4g35610      --------                                                                  <---------WRKY38(1)        <-------  --------->ANAC58                                                <---------WRKY12           <-------  --------->ANAC46                                        <---------TOE2(3)                 <--------  --------->ANAC58          <------ZmHOX2a(1)   <---------YAB1  <-----------HVH21          <--------- -->ANAC58        <---------ARR14(2)          <-----------GT1  <------MYB46(1)        --------->HSFB2a(2) -->ANAC46        --------->ARR14(2)      --------->AHL20(1)   <------MYB83           <---------HSFB2a(2) -->ANAC58        ------->TEIL            --------->ARR11(3)  --------->MYB59   <-------TEIL<-------- ->LBD16       <---------ANAC55(2)        <---------ARR11(3)<------ZmHOX2a(1)--------->CCA1(2)<------ -ALFIN1       --------->ANAC55(2)<------ZmHOX2a(1) <---------MYB46(3)       --------->At4g35610   aaacacccaaatcgcatacgtatatgaagaggaagaggaagaaagatattacgatgggttgaggaaggtcatcggagagagatgcattctcgaggtcggt  18096100  Previous    Next  AGI:  At4g38760.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO47336.1) Range:  from: 18091796    to: 18095595    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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