Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------ABI4(2)                                   <---------SPL7                                 --------->ATERF1(1)                          <-----------GT1                             --------->ZAT14                             <---------DAG2                            <---------REM1(1)                           --------->HSFB2a(1)                        --------->SPL7                                 ------->TEIL                      <---------SPL7<---------ALFIN1                --------->ANAC58                  --------->ANAC46--------->RAP2.6(2)               --------->ANAC58            <----                  --------->ANAC58--------->ANAC46                  --------->ANAC46        ---------           <------ZmHOX2a(1)--------->ALFIN1                       --------->SPL7         --------->ARR11(3) ------NtERF2     --------->ANAC58--------->DEAR3(1)             <---------SPL7       ---------->DOF2   ccagcattcgataggattccaggccatacggtgtagccgcaccgattagcgaatgtgaatgttgagccatacgaaccttttaacatccaaaagataaaga  18067800   <---------ATHB12                                  <----------DOF2                 <<<<<<<<<TBF1 ------ID1         ------->TEIL              <---------YAB1                         <---------------AGL15 ->DOF2     --------->AHL20(2)   <---------ZAT6 <---------WOX13(1)                <<<<<<<<<TBF1   aacaaatcactaaaaaaaatgaaactttgaaacgagtgtaagtagatgtgatagactttgaagtaagtgagtgagagactcttcttcttcttctggttat  18067900                                                    <------NtERF2                    <---------ANAC58                                                    ----------->HVH21     <---------YAB1                        ---------->DOF2            ------>NtERF2        --------->YAB1         <-----                   --------->ZAT14                <---------ANAC58      <---------ICU4<---------SPL7                   <---------ZAT14       --------->ALFIN1              <---------YAB1<---------ANAC58           ---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->YAB1 ---------->ID1       --------->At4g35610 <---------At4g35610    <---------ANAC58  <-------TEIL<----------DOF2------       <---------At4g35610 --------->At4g35610   <-----------------------TaNAC69(2) --------------->AtSPL3   acctgtggaagctaaaaggagaacagtgaagctcaatgtgagagtggaagaggcgcgacgagaagaaagattcatcatggttctttgtcgtactcagtgt  18068000                                   <---------TOE2(3)                               <----------DOF2                         <---------ARR11(3) ----ZAT14           ---------->DOF2<-----------RAV1(1) --->ZAT14  -------->P   --------->ARR11(3)                  ----------->GT1                       --   tcttggtctattctaaccagaagtaaaggtcttctttgatgttgggaagaagatgagagagattagtaaaactgtgaagctatttgagttgaaatggggt  18068100                                                                                        ------->TEIL                                                                                  --------->ATHB51                                                                                  --------->ATHB12                                                                                 <---------YAB1                              <---------ZAT6                                  --------->ICU4            <---------ANAC58<---------ANAC58              <<<<<<<GRF7     --------->ZAT18          *TSS            <---------ANAC58<---------ANAC46            ----------->HVH21 --------->ZAT14       -----      <---------AHL20(2)    <---------ANAC58 >>>>>>>>>>AtWER              <---------ZAT14      <----- --------->GT1        <---------YAB1 <---------ZAT18  ----------->RAV1(2) <---------ZAT18      <-----   tttgttatttttttccttgaatttgttattgagtgttactgggctctatgcctgaaacctgacaaaatttctcttgtgcacttattattgaatcttttta  18068200                                                                             <---------YAB1                                                                           <--------HAHB4                                                                           <---------ICU4                                                                          <---------YAB1                                                                        --------->YAB1                                                                        <---------ICU4             <-                                        --------->CCA1(2)           <---------ICU4                 <-                                   <------ZmHOX2a(1)               --------->ICU4                 ---       --------->YAB1             <------MYB83                     <---------YAB1                 ---     --------->AHL20(2)          --------->MYB111(1)      ------------>CBF--------->ICU4          <-- ----------->GT1       <---------ARR11(3)         ------>MYB46(1)--------->YAB1                ------ ---->ATHB12           --------->ARR11(3)    <------ZmHOX2a(1)  <---------YAB1               -------- ----AHL20(2)      ---------->DOF2<------MYB46(1) ------>MYB83 <---------ARR11(3)            <------- ----YAB1   <----------ID1      <--------P--------->CCA1(2)    --------->ARR11(3)      ----------->GT1   attgggttaaaataactacaaaaaagatttatgggtaggaagagataggaccaaatggttttcaatatcattattcattattatttcacttgtaaaaaaa  18068300                                                                  <---------YAB1                                                            <-------TEIL                                                        <---------YAB1                        -------                                                       <---------AHL20(2)              <---------YAB1                                                       --------->AHL20(2)            <---------ICU4 --------AHL20(2)                                     <---------AHL20(2)             --------->YAB1 --------YAB1                                         --------->AHL20(2)            --------->ICU4 ------>AHL20(1)                                      --------->YAB1                <---------YAB1 ------>AHL20(2)          <---------ZAT14         <---------AHL20(2)              <---------ICU4 -------AHL20(1)        --------->REM1(2)         --------->AHL20(1)              --------->YAB1 --->AHL20(2)        <---------ANAC46             --------->AHL20(2)             --------->ICU4 <---- ->AHL20(2)  --------->ICU4                      --------->AHL20(2)       ----------->GT1    -------- --AHL20(2)  <---------YAB1                      <---------AHL20(2)     <---------ANAC46     --------   tataattgtattgttatgattttctgtgtatactagtactactatgtctaaattaattaaaattcattttcattttgtgtaaaattatgatgacaacgcc  18068400                                                                                        <-----------RAV1(2)                                                                                     <------NtERF2                                                                          <---------ANAC58  <---------AHL20(2)                                                      <---------ANAC58        --- --------->ICU4            <----------DOF2                         --------->ATHB12 <---------DEAR3(2) >GAMYB                <------ZmHOX2a(1)                     ----------->RAV1(1)   <---------DEAR3(1) -----ANAC46     <---------ANAC58                            <---------ALFIN1     --------->RAP2.6(3) ->ANAC46        <---------ANAC58                           <---------ZAT18   ---------->DOF2  <----- ->DEAR3(1)     <---------MYB46(3)                          --------->ZAT18<----------DOF2  ---------   gtatttattcgtatcaattggttgaggagctttgtctgtgtaaaaaaaaactatgttattagcccacactaattgggcttgaaagtcggcccatgtgaag  18068500        --------->TCP16(1)        --------->TCP20        <---------PCF2        <---------ARR14(2)                                                    ------>MYB83        --------->TCP11(2)                                                    --------->MYB52(1)        --------->PCF5                                                        -------->P        --------->ARR14(2)                                                    ------>MYB46(1)        --------->PCF2                                                       --------->MYB55(1)       <---------TCP16(2)                                           --------->DAG2      --------->ZAT18                                              --------->DAG2         <<<<<<<<<MYB98      <---------ZAT18                      ---------->DOF2        ---------->DOF2        --------->TOE2(3)     --------->ALFIN1              <----------ID1         --------->ALFIN1  --------->MYB46(3) ---------->DOF2                 ---------->DOF2        <----------DOF2     --------->AtMYB61 ------>ALFIN1        --------->ANAC46 ---------->DOF2<---------HSFC1(2)    <---------MYB111(1) ----AtMYB61--------->LBD16  --------->ANAC58         --------->HSFC1(2)    <---------MYB59 --------- -->HVH21 <---------LBD16    --------->ANAC58        --------->GLK1(2)      <---------MYB46(2)   gtggaaagtggacccgcgttcaaaacacaacaagaaaaagacaaagaaagatgagaagctttggggctaaaagggggacctaccgaaactatgttaaagc  18068600                                                                                 <---------ANAC46                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                              <---------WOX13(1)                                                                            <---------ICU4                           --------->ANAC46                                 --------->ATHB12                        --------->ZAT14     <<<<<<<<<SARD1                 --------->ICU4                 --------->ZAT18 <----------DOF2 <----------DOF2           <---------YAB1          --  <---------ICU4 --------->ETT(2)--------->TOE1(3)                      <---------YAB1            --- <-------TEIL<---------WOX13(1)  --------->TOE2(3)                    ----------->GT1            <--- ->DOF2   <---------YAB1<---------ZAT18     <<<<<<<<<CBP60g           --------->YAB1      <----------   atattcatttctgtgattgtccacagtccacataactttaaacccaaatttctttgaaattcgagttttgaatcgtgataattgcttatttttcacaatc  18068700  Previous    Next  AGI:  At4g38660.1    Description:  thaumatin, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24180.1); similar to unknown [Populus trichocarpa] (GB:ABK92515.1); contains InterPro domain Thaumatin, pathogenesis-related (InterPro:IPR001938) Range:  from: 18066171    to: 18068199    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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