Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              <------NtERF2                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           --------->RAP2.3(1)                                                                                           --------->ATERF1(1)                                                                                           <------NtERF2                                                                                           <---------ABI4(1)                                                                                          <---------DEAR4(2)                                                                            <---------At4g35610<-----                                                                            <------NtERF2<---------DEAR3(1)                                                                          <---------DEAR3(1)<--------                                                                          <---------WRKY12<---------RAP2.3(1)                                       <-------GAMYB                    <-----------TGA1 --------->DEAR3(1)                                      <---------MYB46(3)                <-----------HVH21<---------RAP2.3(2)                                   --------->DEAR3(1)          <-----------TGA1      <---------ZAT2 <                                   ------->GAMYB              --------->ETT(2)<---------ZAT18------>NtERF2                                  --------->MYB46(3)          <---------bZIP60(1)    --------->ZAT2 -                           <---------AtLEC2      ------>ZmHOX2a(1)     --------->bZIP60(2)<---------ATERF1(1)   --------->ZAT14        <-------TEIL--------->DEAR3(1)      --------->bZIP60(1)  ------>ZmHOX2a(1)<   <---------ZAT2      <------ZmHOX2a(1)<---------MYB52(1)   ---------->ID1 --------->At4g35610<-----   --------->ZAT2<---------YAB1   --------->DEAR3(2)   <---------YAB1 ------>ZmHOX2a(1) <---------At4g35610 ---->DOF2  <---------At4g35610   <------------AtMYB77<-----------HVH21--------->ANAC46 --------->At4g35610   agcactgctcgcagagctcatgttaggatgcatgaaaccgccgttgccatcctcactgtcattgtcgtcatcctcgtcagcgctcctagcagcggcggcg  18048900 ---NtERF2 ------At4g35610 ----->At4g35610 ----->ATERF1(1) ->NtERF2 -----RAP2.3(1) -----ATERF1(1) -----ERF1 ----RAP2.3(2) --->ATERF1(2) ----RAP2.6(2) -->DREB2C(1) ---DREB2C(1) -->RAP2.3(1) -->ATERF1(1) -->At4g35610 ---ABI4(1) ---At4g35610 --RAP2.3(1) --RRTF1(1) --DEAR4(2) --ORA47(2) --RAP2.6(1) --ATERF1(1) --ERF1 -RAP2.3(3) -RRTF1(2) -ANAC46 >ALFIN1 -RAP2.3(2) -RAP2.6(2) -DEAR3(1) >DEAR3(1) -ATERF1(2) >ATERF1(2)                                                --------->MYB52(1)                   <---- ----ATERF1(2)                               --------->ANAC58 <-----------TGA1                ------- -RRTF1(3)                                   --------->ANAC58--------->bZIP60(1)          --------->ICU4 ------NtERF2                                --------->ANAC46<---------bZIP60(1)   ================== -------->At4g35610                     <----------DOF2   ------>ZmHOX2a(1)        <----------DOF2 ---------At4g35610               <----------DOF2       --------->YAB1            --------->TOE2(3) ----DEAR3(1)                   ----------------------->TaNAC69(2)            ------>ZmHOX2a(1) <----   gcagcatccatgttgagttgttctctggctcggtctctttctctttcacgctccctaatcctaacgtcatgttccttctccttacctttgtcagaattat  18049000                                                                                --------->At4g35610                                                                                <---------At4g35610                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                               ------>NtERF2                                                                               <---------ATERF1(1)                                                                               <---------RAP2.3(1)                                                                               ----------->RAV1(1)                                                                              <---------RAP2.3(2)                                                                              --------->ATERF1(2)                                                                              <---------RAP2.6(2)                                                                              <---------DEAR3(1)                                                                              <---------ATERF1(2)                                                                             <---------At4g35610                                                                             <---------ABI4(1)                                                                             --------->RAP2.3(1)                                                                             <------NtERF2                                                                             <---------DREB2C(1)                                                                             --------->DREB2C(1)                                                                             --------->ATERF1(1)                                                                             --------->At4g35610                                                                            <---------RAP2.6(1)                                                                            <---------ORA47(2)                                                                            ------>NtERF2                                                                            <---------ATERF1(1)                                                                            <---------RRTF1(1)                                                                            <---------RAP2.3(1)                                                                            <---------ERF1                                                                            <---------DEAR4(2)                                                                           <---------DEAR3(1)                                                                           --------->DEAR3(1)                                                                           <---------ATERF1(2)                                                                           <---------ANAC46                                                                           --------->ATERF1(2)                                                                           --------->ALFIN1                                                                           <---------RRTF1(3)                                                                           <---------RRTF1(2)                                                                           <---------RAP2.6(2)                                                                           <---------RAP2.3(2)                         ------>NtERF2                                     <---------RAP2.3(3)                         <------NtERF2                                    --------->RAP2.3(1)                       --------->SPL7                                     <------NtERF2                     <---------SPL7                                       --------->ATERF1(1)                     ------->PIF5                  --------->ALFIN1       <---------ABI4(1)                     <-------PIF5                 <-------GAMYB          <---------ATERF1(1)                    --------->ANAC58             <------MYB46(1)         <---------DEAR4(2)                    --------->TGA1a              <------MYB83           <---------RAP2.3(2)                    --------->bZIP60(2)          <---------DEAR3(2)     --------->DEAR3(1)                    --------->O2                <---------DEAR4(1)      <---------DEAR3(1)                    <---------TGA1a             <---------DEAR3(1)     --------->At4g35610                    --------->ANAC46    --------->LBD16  --------->ALFIN1<---------RAP2.3(1)                    ======================================MYC_MYB    --------->ATERF1(1)                    --------->ANAC58   --------->HSFB2a(2)          <---------ZAT2 -----YAB1        <---------ALFIN1 --------->GLK1(1)  <---------AtMYB61<---------At4g35610 -->YAB1  ----------->RAV1(2)<---------DEAR3(1) <---------MYB46(3)  <---------At4g35610 =============================bZIP_DOF <---------HSFB2a(2)          --------->At4g35610 -----TOE2(3)<-----------HVH21 <------NtERF2    <---------DREB2C(2) --------->ZAT2 <------NtERF2   cgttgttgtttcccctgttaccacgtccgcctcggcgaaatccagaagagtcggtggaggtgtccatgggagcagcggcggcggcagagcgagaagaacg  18049100                                                                                         --------->TCP20                                                                                         --------->TCP15(1)                                                                                         <---------PCF5                                                                                         <---------PCF2                                                                                    <---------MYB46(3)                                                                                    --------->MYB55(2)                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                   --------->ALFIN1                <------ZmHOX2a(1)                                                  <---------AtMYB61           <---------ANAC46                                                        <---------DEAR3(1)           --------->ALFIN1                                                        --------->MYB55(2)         <---------MYB46(3)                                                       <---------ABI4(1)        --------->ALFIN1                                                        --------->LBD16        <---------AtMYB61                                                       --------->MYB55(2)        <---------DEAR3(1)                                                      <---------MYB46(3)      <------MYB83                                                             <---------ANAC58      <---------MYB46(3)          <------NtERF2                                <---------ANAC46      <------MYB46(1)            ------>NtERF2                                 <---------ANAC58     <---------AtMYB61          <---------PCF2                                <---------LBD16     --------->ALFIN1         <---------MYB46(3)           ---------->DOF2 --------->At4g35610     <---------DEAR3(1)      --------->ALFIN1           >>>>>>>>>TBF1      <---------At4g35610     --------->MYB55(2)    --------->ALFIN1          >>>>>>>>>TBF1        --------->MYB52(2)    <---------ABI4(1)      <---------ANAC46       >>>>>>>>>TBF1           <-----------RAV1(1)  <---------MYB46(3)      <------ZmHOX2a(1)    >>>>>>>>>TBF1           <----------DOF2--------->ALFIN1  --------->MYB55(2)   <------ZmHOX2a(1)   <------ZmHOX2a(1)          -------------->OsCBT          <   agagcgggtggtggtggaggaagaaggaggagtgggggcaagtgaggaagaagaagaagaagaaagacgagcgcgtttgctgcgggtggtgggaccagag  18049200                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                    <---------At4g35610                                                                   <---------ATERF1(1)                                                                   <---------RAP2.3(1)                                                         <---------ATERF1(1)                                                         ------>NtERF2                                                      <---------ATERF1(1)                                                      ------>NtERF2<---------RRTF1(1)                                                     --------->DEAR3(1)         <---------------AGL15                                                    --------->ATERF1(1)<------NtERF2                                                    <------NtERF2 <---------ANAC58                                                  <---------DEAR3(1)--------->ATERF1(1)                                                <-----------HVH21 <---------RAP2.6(2)                <------ZmHOX2a(1)         --------->At4g35610     <---------RAP2.3(3)              ------------------------>ANAC81 <---------AtMYB61   <---------ANAC58--------->AtLEC2           --------->ALFIN1               <---------At4g35610     <---------RAP2.3(2)           ------------------------>ANAC81--------->ZAT2<---------ALFIN1 --------->LBD16           --          <------ZmHOX2a(1)               <---------ZAT2--------->DEAR3(1)     ----------------->AGL3        --------->ALFIN1    >>>>>>>>>TBF1 ----------->RAV1(2)    <---------LBD16--------------->AGL15       <------ZmHOX2a(1) >>>>>>>>>TBF1    <------NtERF2--------->ATERF1(1)     ----------------->AGL1     --------->ALFIN1 >>>>>>>>>TBF1     <-----------RAV1(2)  <------NtERF2   <-----------GT1  <------ ------NtERF2<------ZmHOX2a(1)     --------->ALFIN1<---------ATERF1(1)------>NtERF2  ---------->DOF2-   gcagagggaggaggaggaggagaagaagaagaagaagatggggcagctgaggtcgcctccgcccgcttgcggctccgagtttccatacaaaggaagaaac  18049300                                                                                   <------------CBF                                                                              --------->ARR14(2)                                                                          --------->LBD16                                                              ------------>CBF<---------ARR14(2)         <---------ARR14(2)                                   <------ZmHOX2a(2) ------>ZmHOX2a(2)         <---------GLK1(2)     <---------YAB1                --------->AGP1  --------->GLK1(1)         --------->ARR14(2) --------->GLK1(2)               --------->At4g35610 ------------>CBF-----    <---------ARR14(2)     --------->ARR11(3)      <---------At4g35610   <---------LBD16        -----    --------->ARR14(2)     <---------GLK1(2)       --------->At4g35610  --------->ZAT14        <----- ------->LBD16           ----------->ARR10     --------->ANAC58         <---------ZAT14     --------- ---GLK1(1)         --------->YAB1 ------>ZmHOX2a(2)        <---------At4g35610<------ZmHOX2a(2)----- -------->LBD16    <------ZmHOX2a(2)           --------->ANAC58       --------->ANAC46      ---------   cccgagtttccgattcgctcgatcagaaagattctgatcggacactcgctcgcatctcactcagatcaattcactccagggatccaattgaaactcgcac  18049400  --------->TOE1(3)  --------->TOE2(3) ----------------->AGL2                       ------->TEIL ---->ANAC58    --------->LBD16              --------->ARR14(2) ---->ANAC46  <---------LBD16             >>>>>>>>>TBF1 ----TOE1(2)  <------NtERF2    --------->ANAC46 >ANAC58     --------->MYB52(1)--------->ANAC58 ---->ANAC58 ------>NtERF2     --------->ANAC58 >ANAC58   --------->MYB46(3)---------->DOF2 <---------ARR14(2)         <------------CBF   gaaaccctaattagccaccggaattagtcgaaaacgccagagaagaagaacctctcaaatcgaacccagagagctattgagagagcatgatgcgaatcaa  18049500                                                           --------------->AGL15                                                          ------>ZmHOX2a(2)                                                          <-----------------AGL2                                                          ----------------->AGL3                                                          ----------------->AGL1                                                          <-----------------AGL1                                                          ------------>CBF                                                         <------ZmHOX2a(2)                                                         <-----------------AGL1                                                        <---------ARR14(2)                                                        --------->ARR14(2)               --------->MYB52(1)                  --------->ALFIN1              ---------->DOF2                     ===============HOX2a_HOX2a       <---------GLK1(1)                          ==============HOX2a_HOX2a       --------->GLK1(1)        --------->CCA1(2) <------ZmHOX2a(1)   <------NtERF2 <------------CBF   <------------CBF    >>>>>>>>>TBF1  --------->GLK1(1)        ---------->DOF2 >>>>>   acgaattggaaatcaacaaagggattgagaagagagatggaagaagaaggaaggaggggatccaatttgggcagagacgatgaaaagagagattagaaga  18049600                                                                      ---------->DOF2                                                                 <---------AHL20(2)                                                              <---------AHL20(2)                                    <---------AHL20(2)       --------->AHL20(2)                                    --------->AHL20(2)      <---------YAB1                               <---------YAB1              --------->AHL20(1)                        --------->WRKY38(1)                --------->AHL20(2)                      --       ---------->DOF2  --------->WRKY12                  <---------ICU4                          <--    --------->TOE2(3)   <---------ETT(2)                 --------->ICU4                        ------    --------->TOE1(3)   --------->ETT(2)              --------->AHL20(2)                      ------- >>>>TBF1             <-----------HVH21               <---------AHL20(2)   ---------->DOF2    -------   agaaaaccctaaatcgagagagtccgtcgactgatgaataaaatagaagaagacatataaatattatataaaaaaagaaaagagagagagagagaggcga  18049700                                                                   <---------ANAC55(2)                                                                   <---------ANAC58                                                                   <---------ANAC46                                                                   --------->ANAC55(2)                                                                   <---------O2                                                            ------>ZmHOX2a(2)                                                     --------->ANAC58                                                     --------->ANAC46                                   --------------->AGL15   <------ZmHOX2a(2)                                   <---------------AGL15  --------->ARR14(2)                               ====================================HOX2a_HOX2a       --------->ARR14(2)      ===================================HOX2a_HOX2a       <---------ARR14(2)      ------>ZmHOX2a(1)     --------->ANAC58  ------>NtERF2               <---------ANAC58  ----------->HVH21  <---------ANAC55(1) ----------->HVH21            <---------ANAC58 <---------WOX13(1)  <---------ANAC58 ------->LBD16            <----------DOF2 <---------ANAC55(2)      --------->O2   --------->ANAC58 -------LBD16          ---------->ID1     --------->ANAC55(2)      --------->TGA1a--------->ANAC46 >NtERF2        <---------ANAC58  ----------------->AGL1  <---------ARR14(2)    <---------ALFIN1 -->DEAR3(1)    <---------ANAC46 -------->P ----------->HVH21      <---------TGA1a--------->ANAC58 ---->HVH21     <---------ANAC58 ============================================MYC_MYB   ccggggacgaatacggtagcgttttgttctttccttaccacaacaagtgactgacacggcgatcgggctacgtgtgtttccttcactccatcgaacccat  18049800  Previous    Next  AGI:  At4g38600.1    Description:  KAK (KAKTUS). Identical to E3 ubiquitin-protein ligase UPL3 (UPL3) [Arabidopsis Thaliana] (GB:Q6WWW4;GB:Q0WN20;GB:Q9SZN9;GB:Q9SZP0); similar to UPL4 (ubiquitin-protein ligase 4) [Arabidopsis thaliana] (TAIR:AT5G02880.1); similar to putative HECT ubiquitin-protein ligase 3 [Oryza sativa (japonica cultivar-group)] (GB:BAD07806.1); similar to hypothetical protein OsJ_004875 [Oryza sativa (japonica cultivar-group)] (GB:EAZ21392.1); similar to hypothetical protein OsI_005309 [Oryza sativa (indica cultivar-group)] (GB:EAY84076.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HECT; (InterPro:IPR000569 Range:  from: 18041025    to: 18049286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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