Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------ANAC46                                                                       <---------ANAC58          <-------MYC3                                                 <---------ANAC58          ------->MYC3                                             <---------ANAC58          ------->MYC2                <---------ALFIN1             <---------ANAC58          <-------PIF5             --------->REM1(1)               <---------ANAC46          <-------MYC2             <---------ALFIN1               <------NtERF2          ------->PIF5         <------NtERF2                     <---------DEAR3(2)       <---------ANAC46        <---------At4g35610               <---------RAP2.3(1)       <---------ANAC58        --------->At4g35610               ------>NtERF2       <---------ANAC58       --------->ANAC58                  <---------RAP2.3(2)  ----------->RAV1(2)        --------->ZAT18                   --------->ATERF1(1)  --------->At4g35610        <-------TEIL                      <------NtERF2         <-----------HVH21  <---------ZAT2           <---------ARR14(2)                 <---------ATERF1(1)   <---------bZIP60(1)  --------->ZAT2           --------->ARR14(2)                 --------->LBD16       --------->bZIP60(1)  <---------At4g35610      <---------SPL7                    --------->ANAC46       <---------TGA2(1) -----------RAV1(2)    --------->DEAR3(1)                   <---------LBD16    <---------ANAC55(2) -------HVH21       <---------ALFIN1  --------->AtMYB61   <---------ARR14(2)   --------->ANAC55(2) --->ALFIN1     --------->At4g35610--------->ANAC46       --------->GLK1(2)<-----------HVH21 ------RAV1(1)  <---------ZAT2--------->ANAC58    <----------ID1<---------DEAR3(1)  --------->TGA2(1)   tcgcagctggctcgtgctagctccaccgaggtccgctacaccactgcatttagcgacgagaacccggcggcttgtgtggtcatgtgatgtcatatggact  18035700                                                                     --------------->AGL15                                                                    <---------ANAC58                                                                    <-----------------AGL2                                                                    <---------ANAC46                                                                    <---------ANAC58                                                               <------MYB46(1)                                 <---------ANAC58              <------MYB83                                 <---------ANAC46             --------->MYB59                                 <---------ANAC58           <---------MYB52(1)                               --------->ARR11(3)          ------->GAMYB                           <---------AHL20(2)           --------->MYB52(1)                          --------->AHL20(2)         --------->TOE1(3)                          <---------AHL20(1)         --------->TOE2(3)                          --------->AHL20(1)    --------->YAB1<---------AtMYB61        <---------ANAC58                          <---------AHL20(2) --------->TOE2(3)--------->MYB111(1)      <---------ANAC46                    <---------ANAC58   <---------------AtSPL8<---------MYB55(1)        <---------ANAC58                    <---------ANAC58   --------------->AtSPL8<--------P    <---------AtMYB61   actactgtttcaatttgttatggcttaatttaatgtcttgttttgtacattaataccataacggtaggtttcttgttttggttttagttccttggtctgt  18035800                                                                                                  <--                                                                                                  <--                                                                                           <---------                                                                                           <---------YAB1                                                                    <-----------GT1   <---------AHL20(2)                                                                 <---------AHL20(2)   --------->AHL20(2)               <---------WOX13(1)                             <---------AHL20(2)     <---------AHL20(2)             --------->ATHB12                                 <---------ICU4         --------->AHL20(2)             <---------ICU4                                  --------->AHL20(2)      <---------AHL20(1)            <---------YAB1                              --------->TOE2(3)         --------->AHL20(2)        <---------DAG2                                  --------->YAB1            --------->AHL20(1)        <----------DOF2            <----------DOF2     ----------->GT1            <---------AHL20(2)  ------>ZmHOX2a(1)            ---------->ID1         <---------TOE1(3)          <---------AHL20(2) <---------ANAC58              <-----------GT1        <---------TOE2(3)  --------->ANAC46  ---------- <---------ANAC58             <-----------GT1    <----------DOF2 <---------ICU4  --------->AHL20(2)   attccttacactttatgattgcaatatgtgtttttccctttcttccaaagacttttaatgttaataaatatttctacccaaaattaaattattttcattt  18035900                                                               <---------AHL20(2)                                                               --------->AHL20(2)        --------->ICU4                                        --------->AHL20(2)                 <---     <---------YAB1                    <---------REM1(1)  <---------AHL20(2)                     ---- <---------ANAC46                <------ZmHOX2a(2)        <---------AHL20(1)                  <------ -------TOE1(3)                 <---------ARR14(2)        --------->AHL20(1)                  <------ -------TOE2(3)               --------->LBD16             --------->AHL20(2)               --------->ARR14(2) --------AGL2               <---------LBD16    <---------TOE2(3)<---------YAB1             <---------ARR14(2) ------->AGL3   ---------->DOF2 --------->ARR14(2)       --------->AHL20(2)  <---------MYB46(3)------   atggtttgtaattgtgaagaaagcttcaaatgcggatcaagttgtagttaagaaaaccattaaattaaaatagagagagtagttgaaacaagggttccga  18036000                         ---------->DOF2                       ------>ZmHOX2a(1)                      --------->TOE1(3)      <----------DOF2 --------->TOE2(3)   <---------YAB1  --------->TOE2(3) ------ZAT2       <---------GLK1(1)      --------->AHL20(2) ----->ZAT2       --------->GLK1(1)      <---------AHL20(1)       ------->TEIL ---ANAC58      <------ZmHOX2a(1)        --------->AHL20(1)    --------->ANAC55(2) ---ANAC58  --------->TOE1(2)       ------------>CBF<---------REM1(1) --->LBD16  --------->TOE2(2) --------->MYB52(1)    ----------->GT1  ---------->DOF2  *TSS <---------ATHB12   gcttccctctttaacctaggacatccttaaaacaagggaacaatataatacaagttgtaacatttatgtatcaaagtgtttatcgatgagcaaatcaagt  18036100                                                                                   <---------YAB1                                                                              --------->YAB1                                                                              <---------ICU4                                                                             --------->ICU4                                                                        --------->RAP2.6(2)                                                                      --------->ZAT2                                                                      <---------ZAT2                          <---------ANAC55(2)                         --------->At4g35610                     --------->ANAC46                                 <---------At4g35610                     --------->ANAC58                                --------->ANAC58              --------->HSFB2a(2)                                    --------->ANAC58    ---------->DOF2              <---------HSFB2a(2)                               --------->ANAC58  -------------------     <------ZmHOX2a(1)    --------->ANAC55(2)                   --------->ANAC46--------->ICU4   <---------TOE2(3) --------->ANAC58--------->GLK1(2)          --------->ANAC58<---------YAB1  -----   agaattaggatgaagtcgagaacacgatacttgatagcgattctacttgtaatttcgctctgttccaaggcaagcagccatgatgatgagaaaaagaaga  18036200                      --------->At4g35610                <---------ARR14(2)              --------->HSFB2a(1)              --------->HSFC1(2)              <---------HSFC1(2)              <---------DEAR3(2)        <---------YAB1                                           ----          --------->ANAC46            --------->YAB1                                            -----          ----------->HVH21          <---------YAB1                                             -----       --------->TOE2(2)  <---------ARR14(2)                 <----------DOF2                    -----       --------->TOE1(2)  --------->ARR14(2)                 ========================================     >>>>>>>>>MYB98   <---------At4g35610               <---------At4g35610                     ----- ----------->GT1--------->ARR14(2) --------->YAB1      <---------ARR11(3)               ---------->DOF2 ----->ANAC81 <---------MYB46(3) <---------WOX13(1)    --------->ARR11(3)               ============= ----->DOF2  <---------DEAR3(1)--------->ATHB12  ---------->DOF2              <---------ICU4  <------   aaggagtaacatacgacggttctgagcggaacttcattgatcataaatggaaaaagagagcttcttttctctggttctgttcattaccctcgaagcacac  18036300         --------->ANAC58         --------->ANAC58     --------->ANAC58     --------->ANAC58 <---------TGA1a --------->ANAC55(1) <---------ANAC55(2) --------->ANAC46 --------->ANAC58 --------->ANAC58 --------->ANAC55(2) --------->O2 --------->TGA1a ===================================================bZIP_DOF                               --------->PCF5 <---------O2                                                                           --------->ALFIN1 ----->AtMYB61                                                               <-----------RAV1(1)   -- ---->bZIP60(2)                       --------->YAB1                --------->GLK1(2) <-----------RAV1(1) ---->ANAC46                       --------->WOX13(1)              --------->ARR14(2) <---------O2<-- ---->ANAC58               --------->YAB1           <-----------GT1<---------GLK1(2)  --------->ALFIN1 ==========bZIP_DOF        <---------ICU4      --------->ATHB12    <---------ARR14(2)<---------ARR14(2) ---->ANAC58              <---------YAB1 ---------->DOF2        ------>ZmHOX2a(2)    --------->ARR14(2) ==========bZIP_DOF    <---------YAB1<---------ATHB12         --------->ARR14(2)    <---------At4g35610 ---ALFIN1    <---------ZAT14 <-----------GT1 <---------YAB1  <---------ARR14(2)    --------->At4g35610   ctcacgtaagcacgtctactctgtttttattattacccaatcaaaaagatgatttcacttcatggatcggattctggttttgttgcagatgtggcccagt  18036400                                  --------->AtLEC2                                  <---------YAB1                                --------->AtMYB61      <---------KAN4(2)        XXXXXXXXXXXXXXXXXXXX>MIR864-5P                             <-----------GT1       <---------HSFB2a(2)         --------->ANAC58      ---------->DOF2        --------->ZAT6        --------->HSFB2a(2)    --------->ANAC58 ------->ATHB12   <---------LBD16 ------>MYB46(1)  --------->HSFC1(1)     --------->ANAC58 -------YAB1     --------->ALFIN1 ------>MYB83    <---------LBD16------->TEIL  --------->ANAC58   atcattgacaaagctagaattgggggacttaacaccatccaaacttatgttttctggaatgtccatgagcctgaacaaggcaaggtatcatcgacttcaa  18036500                         ---------->ID1                    <----------DOF2            --------->KAN4(2)                                                               ---------           --------->KAN4(1)                                                              xxxxxxxxxxx           <---------KAN4(1)        --------->ATHB12                                     <---------ANAC58          <------ZmHOX2a(2)      <---------ANAC58     --------->AHL20(2)            --------->CCA1(2)          <---------YAB1<-----------GT1            --------->TOE1(3)             ----------->ARR10  <         <---------ARR11(3)      <---------ANAC58  --------->TOE2(3) --------->ATHB12    <---------ANAC58         --------->ARR11(3)<----------DOF2  --------->ATHB12        <---------YAB1 <---------ARR14(2)   ttctctcttaagatcattccttcttttttctttttgggtgatttgatcatttgccttaaaatggttcagtatgatttcaaggggagatttgacttggtga  18036600  Previous    Next  AGI:  At4g38580.1    Description:  ATFP6 (FARNESYLATED PROTEIN 6); metal ion binding. similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT4G35060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62146.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 18034425    to: 18035883    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g38590.1    Description:  BGAL14 (beta-galactosidase 14); beta-galactosidase. Identical to Beta-galactosidase 14 precursor (BGAL14) [Arabidopsis Thaliana] (GB:Q9SCU8;GB:Q9SZN8); similar to BGAL11 (beta-galactosidase 11), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G35010.1); similar to BGAL16 (BETA-GALACTOSIDASE 16), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT1G77410.1); similar to BGAL13 (beta-galactosidase 13), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G16730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47377.1); similar to beta-galactosidase [Gossypium hirsutum] (GB:AAS76480.1); similar to putative beta-galactosidase [Nicot Range:  from: 18036086    to: 18040922    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version