Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->ALFIN1                                                           <---------DEAR3(2)                                                          <---------DEAR3(1)                                                      --------->SPL7                                                      <-------TEIL                                                   <------MYB46(1)              <---------ZAT18                      <---------DEAR3(2)              --------->ZAT18                     <---------MYB46(3)             --------->ALFIN1                     --------->MYB46(2)          <---------YAB1           <---------ANAC58                       --------->MYB59             --------->ICU4           <---------ANAC58       --------->GLK1(2)<------MYB83----------->HVH21           <---------ANAC46       <---------ARR14(2)<---------MYB52(1) <---------ANAC58   ------>MYB83                   --------->ARR14(2)<---------SPL7 <----------DOF2   ------>MYB46(1)         --------->AHL20(2)     <---------DEAR3(1)   <---------ANAC58 <---------MYB59       --------->AHL20(2) ----------------------->TaNAC69(2)--------->YAB1   agaccaaattttggagtgggcttcataaaataaacaaatctggtcatcaaggtcggtacgtcggtgtgactttgcgagtcatcatcgattatccaaaaac  18034000                                                     --------->AHL20(2)                                                    <---------YAB1                                  -                                                  --------->YAB1                                    -                                                  <---------ICU4                                    -                                                 <---------YAB1                                  ----                                      <---------AHL20(2)                                         ----                                     --------->ARR11(3)                                         -----                                     --------->AHL20(2)                                   <----------                                     <---------AHL20(1)                                   --------->GLK1(2)                                     <---------ARR11(3)  <---------AHL20(2)        --------->At4g35610                                     <---------AHL20(2) <---------AHL20(2)         <---------At4g35610                         --------->ANAC58     <---------AHL20(2)                  ----------->RAV1(1)               <----------DOF2       --------->AHL20(1) --------->AHL20(2)   ---------->DOF2    -----            <-----------GT1 ------->TEIL<---------AHL20(2)               --------->DAG2   --------->ARR11(3)          <----------DOF2--------->ANAC58     <---------YAB1            ---------->DOF2   <---------ARR11(3)      ------>ZmHOX2a(1)  --------->AtLEC2 <---------AHL20(2)--------->AHL20(2)--------->DAG2  -------   aataactcctctctttactttcttcccatgcaccaagaatatattttttttattattatttattaaacaaaaaaaaaagtaaagcagcagaaaatctaac  18034100 -------->ANAC58                                      >>>>>>>>>>>>>>>>>LFY -------->ANAC58               --------->YAB1        <-----------GT1   <---------AHL20(2) -------->ANAC46               <---------ICU4      <---------YAB1 --------->AHL20(2) --->GAMYB                    <---------YAB1     <-----------GT1 --------->AHL20(2) ----->TOE1(2)                --------->ICU4    --------->AHL20(2)<---------AHL20(1) ---->ANAC58                --------->YAB1      --------->AHL20(1)--------->AHL20(1) -ARR10          <------ZmHOX2a(2)              <---------AHL20(2)<---------AHL20(2) ---->ANAC58    --------->ARR11(3)             --------->AHL20(2)<---------AHL20(2)          <------- -->MYB52(1)    <---------ARR11(3)      ----------->GT1    --------->YAB1            <-----------GT1   gcacgactcttgtcccaagatcagtctcagtcatcatcaaaacagaaaattttattatccattgtaattttatttttttcttacaaattacaactctttt  18034200                                                                                      --------->DOF5.7(2)                                               ---------->DOF2                        <---------MYB52(1)                                       --------->WOX13(1)                        ------------>MYB.PH3(1)                                   --------->ANAC46                            <------ZmHOX2a(1)                                   --------->ANAC58    ----------->GT1       --------->MYB59 ---DOF2                           --------->ANAC58 --------->MYB52(1)     --------->ICU4   ttttttcattcatggaattggaatgaagaaatgttttaagccaatccaaaaaagaaaccgaaaaaaaaaaactagaaattaggaaaccgttagcaagaag  18034300                                                                                                    -                                                                                                    <                                                                                                    <                          ----------->RAV1(2)                                                      <-                          --------->ZAT2                                                           <-                          <---------ZAT2                                                           --              ------>NtERF2                                                                      ----             --------->DEAR3(1)                                                                 <----            <------NtERF2 --------->At4g35610                                                  ------            --------->RAP2.3(1)                                                               <------            --------->ATERF1(1)                         --------->WOX13(1)                 <---------ICU4           <---------DEAR4(2)               --------->DAG2         --------->AHL20(2)     --------->ICU4           <---------RAP2.3(1)            ---------->DOF2 <---------ATHB12  <-------TEIL <---------ANAC55(2)           <---------ATERF1(1) <---------PCF5      --------->MYB46(3)   --------->MYB59  --------->ANAC55(2)          <---------DEAR3(1)  ----------->HVH21----------->HVH21 --------->ANAC55(2)   <-----------GT1   --------->GLK1(2)<------ZmHOX2a(1) ---------->DOF2  --------->MYB46(3)  --------->CCA1(2)  -------   agaagaatcgagacggcgactaggaaactgctgggaccagaaaagaaaggtgacccatccatcattcacttaattagatacatactgtattacttattac  18034400 -------->YAB1 --------ATHB1 ---------ICU4             <---------YAB1 --------ATHB51          --------->YAB1 --------ATHB12    ------------>CBF ------->ICU4<---------GLK1(2)                     <----------DOF2                        <---------ZAT14 ----->YAB1--------->ARR11(3)                      <---------DAG2              --------->GLK1(1) -----YAB1 --------->AHL20(1)           <-----------GT1  <----------DOF2       <---------GLK1(1) ------>CBF<---------ARR11(3)         <----------DOF2   <---------DAG2   <-----------GT1  --------->At4g35610 -----GT1 <---------AHL20(2)<---------ICU4   --------->AtMYB61      <----------DOF2       --------->ZAT14 -->YAB1----------->TBP  *TSS   <-----------GT1 <---------ALFIN1 <---------ALFIN1 <-----------GT1 ---   aataatgcctatatatattctcccaattcatcatttacttctttacacctccactttcccttttgcccctcttttttacagatttcactctctgctctac  18034500                                                                  --------->HSFB2a(2)                                                                  <---------HSFB2a(2)                                                                  --------->HSFC1(1)                                          <---------TOE1(2)      <---------LBD16                                         --------->LBD16     <----------DOF2                          --------->HSFB2a(1)               --------------->AGL15                          <---------HSFB2a(1)               <---------------AGL15                          <---------HSFC1(2)               <-----------------AGL1                    ---------->DOF2      ------>ZmHOX2a(1) <-----------------AGL2                   ------>ZmHOX2a(1)    <---------LBD16    ----------------->AGL1                ------>ZmHOX2a(1)  --------->ZAT6          ----------------->AG            <---------ALFIN1--------->ARR11(3)            <-----------GT1          ------>ZmHOX2a(1) <---------ARR11(3)           <-----------GT1                 <---------ANAC58         <---------ALFIN1 --------->HSFC1(2)       <---------TOE1(3)                 --------->CCA1(2)       ------>ZmHOX2a(1)---------->DOF2----------->RAV1(2)---------->ID1         >>>>>>>>>TBF1 ------>ZAT14------>ZmHOX2a(1)   <-----------GT1  <-----------RAV1(2)     ---------->DOF2<---------ANAC58   tactctctcctcctcctcctcctaaagaaagttcttaactctcctgggttcttcaggtttttccttttctggaataaaaagaagaagaaatgggtgttct  18034600                                                                                                    <                                                                                                   <-                                                                                                 <---                       --------->ZAT14                              <----------DOF2          <-------                       <---------ZAT14                            <-------TEIL           --------->TOE2(3)                       <---------At4g35610    --------->DAG2  <---------TOE1(2)         <---------YAB1                       --------->At4g35610   ---------->DOF2 <---------ANAC46         <---------CCA1(2)              --------->ICU4    <-----------HVH21        --------->At4g35610         <---------------AGL15 <---------ICU4    <---------WRKY18(1)    --------->AHL20(2) <-----------RAV1(2)<----------DOF2  ----   tgatcatgtctctgaaatgtttgactgctctcatggtcacaagattaaaaagcgcaaacagttgcaggtactttccctcttccttttcttatcttagcag  18034700               --------->AGP1               --------->ARR14(2)               <---------AGP1               <---------ARR14(2)  --------->ZAT2 ------>ZmHOX2a(2)          <--------ATHB1  --------->At4g35610                       <---------ICU4  <---------ZAT2<------ZmHOX2a(2)           -------->HAHB4  <---------At4g35610                      <---------YAB1       <---------YAB1 -----------RAV1(2)                        <---------ATHB51   --------->YAB1 ------TEIL   <---------CCA1(2)            --------->ICU4    <---------YAB1                    <----- ------ARR14(2)--------->ARR11(3)        --------->YAB1      --------->ICU4                   ------- --At4g35610 ----------->ARR10 <----------ID1          --------->DAG2                         <------ ----->ARR14(2)<---------ARR11(3)     --------->YAB1  ---------->DOF2                    <-----------   attcagctgataacttagatcttggtttgcaaaaaaacaaacataataattcgttgaaaagttatgatgaatgagtctagtagaaactagcttcgatggt  18034800                                        <---------YAB1                                      --------->YAB1                                     <---------YAB1                                     <---------AHL20(2)                                 <---------CCA1(2)                           <---------AGP1                           --------->ARR11(3)                           <---------ARR11(3) <---------------AGL15                           --------->ARR14(2)----------------->AGL3              <---------ZAT6   ----------->GT1--------->HSFB2a(2)   =================================HOX2a_HOX2a   <------ZmHOX2a(1)       <---------ARR14(2)<-----------------AGL2   ================================HOX2a_HOX2a--------------->AGL15 --GAMYB    <---------ANAC58   <---------ANAC46                                          <---------ANAC58 ---->GT1   <---------ANAC46 ------>ZmHOX2a(2)<---------HSFB2a(2)               <---------TOE2(3) ---MYB46(3)<---------ANAC58<------ZmHOX2a(2)----------------->AGL2        --------->ATHB51 ----------WRI1           <---------CCA1(2)  <-----------------AGL3       <---------YAB1 <---------ANAC58   tactaggaaagtttgagtgttacttagtagatctcgtatattatagttccataaatagactgccattagcaagtttattattgtggttttggctggctaa  18034900  Previous    Next  AGI:  At4g38580.1    Description:  ATFP6 (FARNESYLATED PROTEIN 6); metal ion binding. similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT4G35060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62146.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 18034425    to: 18035883    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version