Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------ANAC46  <---------AHL20(2)                                         --------->AHL20(2)         <---------AHL20(1)                                         --------->YAB1       --------->ANAC46                                   ----------->GT1 <---------ANAC58 <---------ARR11(3)                        --------->At4g35610        <---------ANAC55(1)                    --------->ANAC58     <---------AHL20(2)   --------->ANAC58    <-------TEIL ---------ANAC46    --------->ANAC58  --------->YAB1          --------->ANAC58------->TEIL          < -----At4g35610  --------->WRKY18(1) <---------YAB1<---------ANAC58 --------->AHL20(1)  <-----------GT1   aagcgtagattgtttcagagtcaagcatctcaatacattgtaataatatgcatgcgtgtgtttcaagctatatatttatgtatgtgcattttactcttgt  18028800                                      <---------WRKY38(1)                                      <---------WRKY12                                      <---------WRKY45                             <---------ANAC58                                           <---------ANAC46            <---------bZIP60(1)    <---------MYB46(3)                      <---------ZAT14            --------->GLK1(1)<---------ANAC58  <---------YAB1              <---------ZAT18 --------->ARR11(3)      <---------WOX13(1) --------------->AGL15          --------->ZAT14 <---------ARR11(3)    --------->ATHB12  <---------ALFIN1              --------------->AtSPL8 ---------CCA1(2)     <---------YAB1 --------->WRKY18(1)               --------------->AtSPL3   ttatatcttctgtgatatcaaaacttgattgacttggtggtcaacacttgttatagcaaacaaacaaactatagcagtactctctcagtctcttgtatgc  18028900                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                                                 <---------ANAC55(2)                                                                                 <---------ANAC58                                                                            <---------ICU4------>ZmHOX2a(1)                                                                           ------>ZmHOX2a(1)                                                         <----------DOF2  --------->TOE2(3)    ----------->GT1                      --------->GLK1(1)       --------->HSFB2a(2)  --------->ARR14(2)  ---------->DOF2           <----------DOF2           ---------->ID1   <-----------GT1<---------ARR14(2)   attgcaaagaaaaaacaaaacatccgtctcctttcagcctcagatttcaacaatttgttctttacttctgaaatttcctcatttcgtgaatccttcaagt  18029000                                                                            <---------DAG2        <---------ANAC58                                              ----------->HVH21        <---------ANAC46               <---------ATHB12             <---------At4g35610       <------        <---------ANAC58  <---------ICU4--------->YAB1              --------->At4g35610      <-------        <---------bZIP60(2)       --------->YAB1                    ------>ZmHOX2a(1)     <----------DOF2   caattctgtgtcgtgttctcagacctattcattccatcacaatcatccatctcaatttccttccttcttcctctgaaaccttttgactctgtctttggtt  18029100                                                                            <----------DOF2                                                                           ------>ZmHOX2a(2)                                                                           <---------HSFB2a(1)                                                                           --------->HSFB2a(1)                                                                          <------ZmHOX2a(2)                                                                         --------->GLK1(2)                                                                         <---------ARR14(3)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                         <---------ANAC58                                <---------ARR11(3)                         <---------ANAC58                                --------->ARR14(3)                   ------>ZmHOX2a(1)  <----------DOF2                    --------->ARR11(3)                 <-----------------AGL1     --------->YAB1               <-----------ARR10          <               <-----------GT1        <---------DAG2               --------->ALFIN1               ---           <----------DOF2         <---------ALFIN1              <---------ANAC46            --------          <---------ANAC58  --------->ARR14(2)                 <---------ANAC58  --------->LBD16 <---      <----------DOF2<---------MYB52(1)     <-----------GT1    <---------ANAC58 <---------HSFB2a(2)<- -GAMYB   <---------ANAC58  <---------ARR14(2)                 <---------ANAC46 --------->HSFB2a(2)-- --MYB46(3)<---------DAG2<---------ANAC46--------->YAB1  <----------DOF2<------ZmHOX2a(1) *TSS   ----   gtaaacttctttgcttttttcctgttagcgtaaaccctcacttttataacaacttctcactttcttcgtgtggaggatctttccagagagagagagaaag  18029200                                                                                        <---------WOX13(1)                                                                                      <---------ICU4  --------->ANAC46                                                    <---------HSFB2a(2)     ------>ZmHOX2a(1) -----------GT1                                                       --------->HSFB2a(2)    <------- ------>CCA1(2)                                                    <---------ARR14(2) --------->ATHB12 -->DOF2    <---------MYB52(1)                                  <---------ANAC58     <---------YAB1 ------ARR11(3)                        ------>ZmHOX2a(2)        <---------ANAC58     --------->ICU4 --------ARR14(2)                    --------->ARR11(3)         <---------ANAC46   --------->YAB1 ------->ARR14(2)     --------->MYB59<---------ARR11(3)    --------->MYB52(2)      <---------ICU4  <- ----->ARR11(3)      <-----------RAV1(2)                  --------->ALFIN1 <---------------AtSPL8  <-   atatacgcttctctgttaattagtcaggttctaagttttgatctccaagtctctgagagggtagtggcatgtctggaatagtacatcatgattgtcctaa  18029300                                                                                             <-------           ------>MYB46(1)                                                                   --------           -------->P                                                                <------MYB46(1)           ------>MYB83                                                              <------MYB83    <---------GLK1(1)                                                                ----------->GT1    --------->GLK1(1)                                                               --------->MYB59  <------ZmHOX2a(1)                                 --------->LBD16               <---------MYB52(1)  ================================HOX2a_HOX2a      <---------ANAC46          --------->MYB52(1) --MYB59   --------->SPL7                         <---------LBD16      ----------->GT1       -------- ----------RAV1(2)                         <---------KAN4(2)          <------ZmHOX2a(1)      <------- --------LBD16             <------ZmHOX2a(2)   --------->At4g35610   ----------->GT1--------->MYB46(2)   ctcaggaaatccctaccacgagtgccacgatcagtgtttcaagagaataagctccggagatgtccccaagaaggagaaaaaacggtttggtaagaagctt  18029400          <---------AtLEC2    <---------YAB1 --HSFB2a(1)               ------->TEIL                                                    <---------ZAT2 ->HSFB2a(1)             <---------ZAT14    <---------TOE2(3)  ---------->ID1  <----------DOF2 ->HSFC1(2)              --------->ZAT14   ---------->DOF2 <----------DOF2 <---------TOE2(3) --HSFC1(2)            --------------->AtSPL8   --------->GLK1(2)  <----------DOF2         --------->ZAT2   ctcattttgtttgcatttcaagatgactgtacttgttatatagattaaagaaactgtggaactttgtctctttgtctaaggctttggtaaaccagcttgt  18029500                                     <---------ANAC58                                     <---------LBD16                                     <---------ANAC58                                     <---------ANAC46                                    <---------LBD16                             <---------ZAT6               -------->P  <---------ANAC46                              ---------->DOF2       --------->ANAC58    <---------ANAC58         <---------ALFIN1 --------->LBD16       --------->ANAC58    <---------ANAC58     <------ZmHOX2a(2)   <---------ANAC46    <---------ARR14(2)    <-------TEIL--------->LBD16      --------->LBD16    --------->ARR14(2)   <---------ARR14(2)    <---------ARR11(3)   <---------ANAC55(2)   <---------At4g35610 --------->ANAC58        --------->ARR14(2)    --------->ARR11(3)   --------->ANAC55(2) <-----------RAV1(2) --------->ANAC58       <---------MYB52(1)    --------->At4g35610  <---------LBD16    <-----------HVH21   agcaaggaaacgcctcttaccagtccggttcgtgttattgcgggaaacagatcaccacttccgagttattacggaaaaagaatggatgagtcagacgagt  18029600                                                          <---------DAG2                                                       <---------ALFIN1                                                   ------->MYC2                                                   <-------MYC2                   --------->LBD16                                                   <-------MYC3                  --------->LBD16                                                   ------->MYC3                  <---------LBD16                                             --------->ANAC58              <------------AtMYB77                                             --------->ANAC58              ==========================                   --------->WRKY38(1)       --------->ANAC46            --------->ARR14(2)                 <---------At4g35610         <---------ALFIN1         --------->ANAC58              ------>ZmHOX2a(1)--------->AtLEC2 <---------ALFIN1      --------->ANAC58     ------>ZmHOX2a(1)   <----------DOF2   <---------ALFIN1    --------->TOE1(2)<---------LBD16 <---------ALFIN1--------->At4g35610      <---------ZAT18 <----------DOF2<---------ARR14(2)   ccccctccttctcttcctccgatgactctttcaatgcaaacttgcccacaccacgttccactttacatgggaacgaaactgccccgggaatcaattggct  18029700  Previous    Next  AGI:  At4g38550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20950.1); contains InterPro domain Phospholipase-like, arabidopsis (InterPro:IPR007942) Range:  from: 18025629    to: 18028794    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g38560.1    Description:  similar to pEARLI4 [Arabidopsis thaliana] (TAIR:AT2G20960.1); contains InterPro domain Phospholipase-like, arabidopsis (InterPro:IPR007942) Range:  from: 18029190    to: 18031327    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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