Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                            ---------                                                                                            <--------                                                              --------->ANAC58              ---------                                                              --------->ANAC58           <------NtERF2                                     ----------->GT1          ----------->GT1            <---------At4g35610        --------->ARR11(3)           --------->ANAC58     --------->ANAC58             --------->ANAC46        <---------ARR11(3)         ---------->DOF2        --------->ANAC58             <---------RAP2.6(2) ----------->GT1         --------->MYB46(3)            <------NtERF2                  <---------LBD16 -------->DAG2       <------ZmHOX2a(1)              <---------LBD16            <------ZmHOX2a(1) -------->DOF2     <---------TOE2(3) --------->ANAC58<---------RAP2.6(2)   ---------->DOF2  <-------- ->RAV1(1) <----------DOF2 --------->MYB52(1)      <---------bZIP60(2)<----------ID1 <-----------RAV1(1)   gaaaagttaacatctttaagtaaggaaaccatcggaagaaagcaaaattagtgatgcggcaagcaagaaaaaaaaacaaaaggatttatgcggcagattc  18017900                                                                                               ------                                                                                               ======                                                                                               ======                                                                                              =======         <---------ARR14(2)                                                                   =======         --------->ARR14(2)                                                                   <------ZmHOX2a(2)     <-------TEIL                                                                             ------- -->GLK1(2)                                                                                  -------- --GLK1(2)                                                                                   <------- --ARR14(2)                                   <---------ARR11(3)                             -------- ->ARR14(2)                        <-----------GT1    --------->ANAC58                       <------- >HSFB2a(1)                      <----------DOF2      --------->ANAC58                       <------- -HSFB2a(1)                ----------->GT1    --------->ARR11(3)                            <------ZmHOX2a(1) >At4g35610             ---------->DOF2 --------->AtLEC2                --------->ANAC58   <---------HSFC1(2) -At4g35610 --------->ANAC46     <---------DAG2       --------->ANAC46  --------->ANAC58   --------->HSFC1(2)   caactggttcgtattcgctaccaaaaaaaaggaaactttaccttgcaagatgttggaagcaactcaagttgagcaagaaaatgaatgaagagaaggatct  18018000                    <---------ANAC46          <------ZmHOX2a(1)   <------ZmHOX2a(1)<---------ANAC58        ------>ZmHOX2a(2) >ZmHOX2a(2)        <---------ANAC58       <------ZmHOX2a(2) ================HOX2a_HOX2a              <---------ARR11(3) =========HOX2a_HOX2a                     --------->ARR11(3)           ------>MYB46(1) ================HOX2a_HOX2a              <---------AGP1             --------->AtMYB61 =========HOX2a_HOX2a <------NtERF2       --------->ARR14(2)         ------->GAMYB -->GLK1(1)      <---------RAP2.3(3)      --------->AGP1             <---------MYB59 ->ARR11(3)     --------->ALFIN1          <---------ARR14(2)        --------->MYB46(3) --ARR14(2)   <---------O2               <---------CCA1(2)         -------->P                   <---- ->ARR14(2)   --------->ALFIN1     <---------ANAC58               --------->WOX13(1)          <------ --ARR11(3)----------->ARR10       <---------ANAC58             <------ZmHOX2a(2)         --------->AHL20(2) --AGP1   <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <---------LBD16 ------>MYB83    <----------DOF2   caagaggacggaggagatgtgggcgtggaatttcagagcttgtagatctactacgactacggatggatcaaccaaacacaaaatttatacttttatataa  18018100                             <---------AHL20(2)                        --------->AHL20(2)                        <---------AHL20(1)                        <---------AHL20(2)                        --------->AHL20(1)                       <---------AHL20(2)                       --------->AHL20(2)                      <---------YAB1                   --------->ICU4                   <---------YAB1                 <---------ICU4                 --------->YAB1             <---------AHL20(2)         <---------GLK1(2)  <---------AHL20(2)        >>>>>>>>>TBF1 -----AHL20(2)  <---------YAB1           <---------At4g35610                                      --- ---AHL20(2) <---------YAB1 --------->AHL20(2)    <------ZmHOX2a(1)                        ----------   aaatgaacaccgatttttattattattaaattaaatataagcgagcggatgaggaagaagaagaccaattgacaaaaaaaaaaactttttaagaagaaaa  18018200                                                                                                    -                                                                                                    *TSS                                                                                                  <--                                 <----------DOF2                   ---------->DOF2               ----                             <----------DOF2                   ----------->GT1                  <----                            ------>ZmHOX2a(2)        --------->ZAT14                          <------                          <---------ARR11(3)         <---------ZAT14                       <---------O2       --------->KAN4(2)  --------->ARR11(3)         <---------ZAT18                       --------->O2 ------>AHL20(2)         --------->YAB1    --------->HSFB2a(2)<---------TOE2(3)         --------->WRKY18(1) ->GT1<---------GLK1(1) <---------ATHB12   <---------HSFB2a(2)<---------TOE1(3)        <-----------HVH21   aaaaatggttatcccctcagaaactaatgatctttctttcaatgtctggaaacagtgaacaatgaaggtaaaagagagagagagagagaggtcaagtcgc  18018300 -------->SPL7 -------SPL7 ----->DEAR3(1)            ----------->GT1 ---------->DOF2                <----------DOF2        ---- --NtERF2  ------>ZmHOX2a(1)           ---------->DOF2          <-----------GT1            <---------ZAT6 ---DEAR3(1)  ------>ZmHOX2a(1)    ---------->DOF2             <-----------GT1         --------->ZAT14   cgaacgagacatcctccttcgacgtttttatgtaaaaaaaagaaagaaagttggagttgttttttttatcttctctctttatctctctctatagtcttaa  18018400                                                            <------NtERF2                                                            <---------ZAT2                                                     <---------DEAR3(2)                                                     <---------ATERF1(1)                                                    --------->ETT(1)                                                  <-----------HVH21                   --------->PCF2                                                 <---------ZAT2                       <---------TCP20                                              <---------ANAC58                        <---------TCP16(1)                                              <---------ANAC46                    <---------ANAC58                                           <---------DEAR3(1)<---------ALFIN1--------->At4g35610                                        <---------ATHB12    <---------At4g35610<----------DOF2                                       ------>MYB83 <---------DEAR3(1)       <---------At4g35610                      --------->ANAC58 ------>MYB46(1)   --------->ATERF1(1) <---------ZAT2                      --------->ANAC58--------->MYB52(1)------>NtERF2        --------->ZAT2              -------->P             --------->TOE1(2)  <---------ATERF1(1) <---------TOE1(2)         --------->ICU4              --------->AtMYB61<------NtERF2    <-----------HVH21 <---------ALFIN1 ----->ZAT6  <-----------GT1   ---------->DOF2<---------ANAC58     ---------->DOF2<---------ANAC58   gactaagagtgattcttaccagacaagacccataaaagaccaacgatggcgaggtcggagccagcacatcaaaggtcccagctttcgggctccacttccc  18018500                                           ---------->DOF2                                  ------>MYB83                                  ------>MYB46(1)                                  --------->MYB52(1)                                <---------MYB111(1)                                --------->AtMYB61                                            --------                                --------->MYB46(3)     <-----------GT1                      <--------          <-----------GT1       <---------MYB46(2) --------->AHL20(1)          --------->AHL20(2)     <----------DOF2           --------->ANAC58   --------->YAB1               --------->AHL20(1)     ------>ZmHOX2a(1)         --------->ANAC46   --------->AHL20(2)           <---------AHL20(2)   -  ---------->ID1               --------->ANAC58--------->YAB1           ----------->GT1     <--------   tctcgtccttttttgcctcattagatggacaacaccaaacagtggcaaagaataatattacagtttttttagggaagaaaataaaatagttgatattatt  18018600     <--------ATHB1     -------->HAHB4                                                                     --------->ARR11(3)     <---------ICU4                                                                     <---------ARR11(3)    <---------YAB1                                                                      <---------GLK1(2)    --------->ICU4                                                                    ----------->ARR10    <---------ATHB51                --------->ARR11(3)                            --------->ANAC58  --------->YAB1                    <---------ARR11(3)                            --------->ANAC46 <---------YAB1                     <---------AHL20(1)                            --------->ANAC58 ->ATHB12                           --------->AHL20(1)           --------->YAB1 --------->MYB52(1) -YAB1                        <---------AHL20(2)             --------->ICU4  --------->WRKY18(1) -------->AHL20(2)      <----------DOF2              <----------DOF2        <-----------HVH21 -AHL20(2)            ------>ZmHOX2a(1)        <----------DOF2  <---------YAB1<---------WRKY12   gatataataattcattcaagtctcctctttattttaaaaatattcaactcttttactttagacattatcataaactggggtcaaacggaagatttttctt  18018700                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC55(2)                                                                          <---------ANAC46                                                                          <---------DEAR3(1)                                                                          <---------DREB2C(2)                                                                         <---------ABI4(1)                                                                       --------->ALFIN1                                                                     <---------bZIP60(2)            --------->RVE1(1)                             <---------AHL20(2) ----------->GT1           <---------ARR11(3)                <-----------GT1         <-----------RAV1(1)           --------->ARR11(3)            --------->AHL20(2)     <------MYB83 --------->ALFIN1        --------->AHL20(2)  ---------->DOF2 --------->ARR14(2)  <------MYB46(1) <-----------GT1        <---------AHL20(2)<---------ATHB12  <---------ARR14(2) --------->MYB59<-----------HVH21 --------->TOE2(3)  --------->ZAT6 ----------->GT1       --------->AHL20(2) <------NtERF2   caacgtttaataaaatctcttaacacaaatcaaagaagagtaaaaatatacggtttcgataaaatttggttatgtggcggtgttacatgactacgactga  18018800  Previous    Next  AGI:  At4g38520.1    Description:  protein phosphatase 2C family protein / PP2C family protein. similar to protein phosphatase 2C family protein / PP2C family protein [Arabidopsis thaliana] (TAIR:AT5G66080.1); similar to unknown [Populus trichocarpa] (GB:ABK94829.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 18015730    to: 18018300    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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