Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------ICU4                                                                 --------->YAB1                                                                --------->ICU4                                                              <---------ICU4                             <---------ICU4                   --------->YAB1                             --------->ATHB51                --------->ICU4                             <--------HAHB4                  <---------YAB1                        --            <---------ARR14(2)  <-----------GT1            --------->YAB1                          <-     <---------ANAC58       --------->ICU4              --------->YAB1                          <----     <---------ANAC58       <---------YAB1          <---------YAB1    <---------YAB1          <------ ---------GLK1(2)  ------>ZmHOX2a(2)  ----------->GT1--------->YAB1 <-----------GT1     --------->AHL20(2) -----RAV1(1)    --------->ARR11(3)  <---------TOE2(3)  ----------->GT1       ---------->DOF2 <------ -->ALFIN1  --------->ARR14(2) <---------YAB1    <---------AHL20(2) --------->YAB1      --------->ICU4   tggattttcttggggatttgatctctcttcattattactacggtttaatatttgattatagtaataataatcacgatttttaaagtggcattaattaagg  17999000                                                                                ------>NtERF2                                                                              --------->RAP2.6(3)                                                                            --------->ANAC46                                                                            <---------O2                                                                            --------->O2                                                                            <---------DEAR3(1)                                                                            <---------TGA1a                          <-------PIF5                                      --------->TGA1a                          ------->PIF5                                    --------->DEAR3(1)           --------->HSFC1(2)                                   <------ZmHOX2a(2)<------NtERF2           <---------HSFC1(2)                                 <------ZmHOX2a(1)<---------DEAR3(1)     --------->LBD16     ----------->RAV1(2)              <---------DOF5.7(2)<---------ATERF1(1) ------->KAN4(1)       <---------ALFIN1     --------------->AGL15    --------->ARR14(2) --------KAN4(1)      <---------ZAT18    <-----------GT1  ---------->DOF2 <---------ALFIN1 --ZmHOX2a(1)   <----------DOF2     <----------DOF2       ============================bZIP_DOF     -- ---TOE1(3)--------->HSFB2a(1)      ==================================================bZIP_DOF------- ---TOE2(3)<---------HSFB2a(1)  <---------ATHB12        --------->DOF5.7(2)------>NtERF2      <------   attaatccagagaagcttcttttgtccacctgcaatgactttaatacccattttagacgttaaaggatcagtatcgccacggcggcatgactcatccgct  17999100            <---------MYB52(1)            <------NtERF2           ------>NtERF2          --------->DEAR3(1)       --------->ANAC46                                                 --------->TOE2(3)       --------->ANAC58           <------------CBF                     <---------ANAC55(2)       --------->ANAC58     --------->ZAT2                             ----------->GT1    <---------ARR14(2)      <---------ZAT2                     --------->YAB1    --------->ARR14(2)     ------>NtERF2                    ---------->DOF2        ---------->DOF2 ---->ZmHOX2a(1)          <---------ALFIN1               ----------->RAV1(1)  ----------->GT1 -->At4g35610           --------->ANAC46                --------->MYB46(3)    <----------ID1 -------- ---At4g35610       <-----------GT1 ----------->GT1   ----------->RAV1(1) ---------->DOF2  ----------   ccttccaatacgccgtcgttttatacccccacctcgaattgaaaaaaaaaaaaccccaacaacaaagataaaaacgtaaaacgaaaaaagcatatcaatc  17999200                                                                     --------->ARR11(3)                                      ------->TEIL                   <---------ARR14(3)                                      <---------TOE1(2)              --------->ARR14(3)                                      <---------ARR14(2)             <-----------ARR10                                      <-----------ARR10              <---------ARR11(3)                                      <---------ARR11(1)             <---------ARR14(2)                                     <---------ARR14(1)     --------->ATHB12                                   ------>ZmHOX2a(2) <---------TOE1(3)                          <----                               <---------YAB1        <---------YAB1  --------->ARR14(2)    --------->ANAC58                           <---------GLK1(1)         <---------TOE2(3)                     --------->ANAC46                     --------->GLK1(2)--------->ARR14(2)   <---------YAB1                  --------->ANAC58 ->WOX13(1)         <---------GLK1(2)<---------CCA1(2) <---------GLK1(2)               <---------HSFB2a(2) -->CBF  ------------>CBF  --------->GLK1(1)     <----------DOF2    --------->RVE1(1)  --------->HSFB2a(2)   tctgtgcctctctcaattctcaaattctgaattctgatcgtatcttcttctctttaagattatcatttgaatatcttcttcatcttcttctccaagcccc  17999300                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                         --------->ARR14(3)                                                         --------->ARR14(2)                           <------ZmHOX2a(1)             --------->AGP1                    ------------>CBF                     --------->ARR11(3)                    <---------YAB1                       <---------ARR14(3)                   --------->TOE2(3)        <---------ARR14(2)                  <---------ICU4--------->ZAT2           <---------ARR11(3)                  --------->YAB1--------->At4g35610---------->DOF2                 <---------ATHB12      --------->ALFIN1 <---------GLK1(1)               --------->WOX13(1)   <---------STY1(2)   --------->GLK1(1)  <------------------------ANAC81             ------------>CBF <------ZmHOX2a(1)    --------->YAB1     <<<<<<<<<TBF1             =====================HOX2a_HOX2a ------------>CBF  <<<<<<<<<TBF1              <---------             ========================HOX2a_HOX2a  <---------ATHB12 <<<<<<<<<TBF1       <----------DOF2           --------->WOX13(1) ====================================HOX2a_HOX2a     <----------DOF2 -----ALFIN1 <------ZmHOX2a(2)===================================HOX2a_HOX2a   <-----------GT1   tctctctctgtatcgatcaatcatcaataggaggagctagcgaggggattcaataaagagatcttcttcttcttcttcgattcactttcctttcttttcc  17999400                                                                                   ------>MYB46(1)                                                                               ------>MYB83                                                                               ------>MYB46(1)                                                                               -------->P<---------ZAT18                                                                              --------->MYB55(1)                        --------->YAB1                                       <---------MYB59                    <<<<<<<<<WRKY18                                          <---------MYB46(2)     -                   ------------>CBF                                          <---------MYB111(2)   --                  <-----------HVH21                                   ------>NtERF2------>MYB83    --              <---------DEAR3(1)                                     --------->DEAR3(1)--------->ANAC58             <------NtERF2                                           --------->ANAC46  --------->ANAC58     <----------DOF2<---------WRKY12                            <-----------GT1====================== <-----------GT1<------NtERF2       <---------WRKY12     ----------->GT1     <---------MYB111(1)  --- -DOF2     <---------DEAR3(1)     <------ZmHOX2a(1)      <---------ZAT6 <---------DAG2 --------->ANAC46   attttccctttcgtcgtcgtcgtcaatggtgatggaggacaacgagagttgcgctagtagagttattttcgacgccttacctacctcccaggccactatg  17999500                                                     <---------MYB52(1)                                                    <-----------HVH21                                                    --------->LBD16                                               --------->ATERF1(1)                                              ------>NtERF2                                              <---------ATERF1(1)                                             --------->DEAR3(1)                                             --------->RAP2.3(3)        <---------At4g35610                  --------->RAP2.3(2)     <---------MYB52(1)                     --------->RAP2.3(1)    <-----------HVH21                       --------->ORA47(2)   <---------ANAC46                        ------>NtERF2   --------->O2                          <---------LBD16   --------->TGA1a                   --------->ARR14(2)   <---------O2                      <---------ARR14(2)   <---------TGA1a                   <-----------ARR10 --------->WOX13(1)          <---------TOE1(2) -------->DEAR3(1)      <---------ARR11(3) <---------ATERF1(1)                     --------->LBD16 ------->DEAR3(2)       --------->ARR11(3) --------->LBD16                 <---------ALFIN1 ------->MYB46(3)       <---------ARR14(3)--------->DEAR3(1)            ------>NtERF2 ============MYC_MYB    --------->ARR14(3)--------->ANAC46             --------->ANAC58 ---->TEIL--------->ZAT18         <---------TOE2(3)--------->ANAC46    --------->ANAC58   gaccgccgtgagcgcatcaaaatggaggtcttcgatgaggttctccgccgtctccgtcaatcggacattgaagacgcccatctccctggtttcgaagacg  17999600                                <---------ARR14(2)                             <---------TOE1(2)                            <-----------RAV1(2) <<<<<<<<<TBF1                          ------>NtERF2    <---------ANAC58           <---------ZAT18                    --------->DEAR3(1) <---------ANAC58    <---------AtLEC2  --------->HSFB2a(2)    ----------->HVH21 <---------ANAC58<---------ANAC58                        <-  <---------HSFB2a(2)------>NtERF2     <---------ANAC58    <---------ANAC58  <---------ATHB12      -- <---------LBD16 ------->GAMYB  --------->ARR14(2) <<<<<<<<<TBF1      --------->ZAT18          ------   acctctggaatcacttcaatcgcctccctgccaggttccttccttgcttcttcttcttcttgcatgttgttgtgccccattcaatagacgactgattttg  17999700                                                                                                <----                                                                                                -----                                                                                                -----           --------->MYB59                                                                     <-----           <---------TOE2(3)                                                                   ------     <---------TOE2(3)                                                                     --------->LBD16     <---------YAB1                                                                     <------ZmHOX2a(2)     <---------TOE1(3)                                                                 --------->ARR14(2)  <---------ATHB51                                                                     <---------ARR14(2)  <---------AHL20(2)                                                  --------->At4g35610  <---------LBD16 --------AHL20(2)                                <---------O2  --------->ANAC58 --------->At4g35610 ------->AHL20(2)  <----------DOF2       --------->At4g35610   --------->ANAC46 <---------At4g35610 ----->GT1 <---------TOE1(3)     --------->ALFIN1--------->O2  --------->ANAC58<---------YAB1  <-----   ttaaattatggtttaggtatgctttggatgtgaatgtggagagggctgaagacgtcttgatgcacaagcgattgctgcattctgcttacgatccccagaa  17999800                                                           <----------DOF2                                                  <---------DAG2                                               <---------ALFIN1                                              <---------ZAT14                                              --------->ZAT14                                            --------->ANAC58                      ===================                                    <---------ANAC58  <-----------GT1       =========================                                    <---------ANAC58 <---------CCA1(2)      <----------DOF2 -----ARR14(2)                  --------->GLK1(1) <----------DOF2      ---------->ID1 ---->GLK1(2)                  ----------------------->TaNAC69(2)   --------------->AtSPL8    <------ ---->ARR14(2)             --------->ZAT2   --------->ANAC58       ================================== ----ARR14(2)              <---------ZAT2 <---------ALFIN1 ========================================== --->ARR14(2)            <-----------RAV1(2)--------->ANAC46<------------------------ANAC81   <------ ----GLK1(2)   <-------TEIL<---------At4g35610<---------ZAT18      <----------DOF2<----------DOF2 <--   tcggcctgctatcgaagttcatctcgtccaggtgagttccttccccactccacttttatctcttttcttctttgttcccttttactttgtataatcccag  17999900  Previous    Next  AGI:  At4g38470.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G35780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47444.1); similar to Os09g0544300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063830.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); Range:  from: 17999426    to: 18003675    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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