Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->MYB52(1)     --------->AHL20(2)                              --------->MYB46(3)     --------->ARR11(3)                              <---------MYB52(2)     <---------ARR11(3)                           <---------YAB1        ---------->DOF2    <---------ANAC58     --------->YAB1         --------->AHL20(2)    <---------ANAC58    <---------YAB1          <---------AHL20(2)                           -------- --------->TOE1(2)    <---------ICU4         --------->YAB1                  <---------YAB1  <------- ------->DOF2        <---------YAB1       --------->YAB1<---------AHL20(2)  --------->AHL20(2) -At4g35610          --------->ICU4      <---------AHL20(2)               --------->ICU4  ------>MYB83 >At4g35610        --------->YAB1       --------->AHL20(2)<---------YAB1  <---------YAB1  ------>MYB46(1)   gaaagtgcgagtgagtccctctcatgattataacaaacgatttttaataataaaagatttaatattgtaatgcatcatttttattcaaaaccaaattaaa  17975400                                                              --------->CCA1(2)                                                     <---------ANAC55(2)                                                     <---------ANAC46                                                     --------->ANAC55(2)                                                     --------->ANAC55(1)                                                     --------->ANAC58                                                     --------->ANAC58                          <-----                                                --------->bZIP60(1)                            ------            <---------ANAC58                  <-----------HVH21                               <------     --------->AHL20(2)              ------>ZmHOX2a(1)       --------->ARR11(3)               ------- ->AHL20(2) <---------ANAC46     <-----------GT1<---------bZIP60(1)             --------->ANAC58 --AHL20(2) <---------ANAC58 <----------DOF2 --------->ANAC46<---------ARR11(3) --------->ANAC58   aaaaaaaaaaaatgacttgttcttctctacgcttttatccttcttacatgtcatcacgtatgagatatgttctgctattgactcgaaacacatctttcta  17975500     <---------DAG2     <----------DOF2 ----------AGL15                   ----------->GT1                  ---------->ID1            <------ZmHOX2a(1) --------->AGL15                   <----------ID1                 ----------->HVH21   <----------DOF2 -----------AGL2                 ---------->DOF2                <---------ANAC58      --------->TOE2(3) ---------->AGL3         <---------AHL20(2)--------->TOE2(3)    <---------ANAC58    <---------ATHB12   atattagctttttttgtttgacttcatttttttcaaaaagaaaaacctttttaaaactcattcaatgcttgacgttttaaatcccaatctttaataggat  17975600                                                         --------->TOE2(3)                                                       --------->GLK1(2)                    ---------                                                   --------->YAB1                ---------->DOF2 <---                                                  <---------YAB1        <---------TOE2(3)   ---------                                                --------->YAB1         <-----------GT1   --------->YAB1                    <----------ID1             <---------YAB1   --------->At4g35610    ------------>CBF            --------->GLK1(1)                --------->YAB1     <---------At4g35610----------->GT1   aagtttgttttcagaattcaaaaaaacaaaattaagtcgatttcaattcatgataataatctaaacagctaattaacatttggcaaagtaacaataatat  17975700                                       <---------ANAC58                                   <---------ANAC58                                   <---------ANAC58                                 <---------MYB46(3)                                <---------AtMYB61                          <-------TEIL <---------ANAC46                         --------->ARR14(1)                         --------->CCA1(2)                        <---------ARR14(2)                        --------->ARR11(1)                     --------->AHL20(2) >AHL20(2)              <---------GLK1(2)             ---------->DOF2      ------>MYB83<-----------GT1 --------GT1          ----------->ARR10<---------ANAC58--------->DAG2    <---------MYB59 >YAB1  ---------->DOF2 --------->ARR14(2)         --------->YAB1     *TSS ------>MYB46(1)   <-------   aactacatttgaaagagagagcaagagattcgctgtggtttgcttatgcataagaataaagggaattaaaaaaaaccaaactcagtttttttcttctttt  17975800                                                                            ------>MYB46(1)     -----                                                                            ------>MYB83       <-----                                                                          ------->GAMYB  --------->TOE2(3)                                                                         --------->MYB46(3)    <-----                                                                         <---------MYB55(2)   -------                                                                         <---------MYB52(2) <--------         <---------ANAC58                                               --------->ANAC58 <----------DOF2         <---------ANAC46                                               --------->ANAC58 --------->TOE1(3)  --------->AHL20(2)                                                 <------NtERF2     ------>NtERF2  <---------AHL20(2)                                                --------->ANAC46<---------At4g35610  <---------AHL20(1)                       <----------DOF2         <---------LBD16  --------->At4g35610 ---DOF2 <---------ANAC58    <---------TOE2(3)                    <---------LBD16   ------>ZmHOX2a(1)   ttaaaaaatttgtgtgtgtgtttgtttgtttgagattagtttggactttggagttttgttcatagtttctcggcaaccaacttctcctctgccttaacgt  17975900          <---------RAP2.6(2)          <---------ANAC58          <---------ANAC46 --------->HSFB2a(2)                <----------DOF2 <---------HSFB2a(2)             ------>ZmHOX2a(1) ---->TGA2(2)                   <---------ALFIN1                                                    < ------HVH21                  ------>ZmHOX2a(1)                                           --------->ARR14(2) ------TGA1          ------>ZmHOX2a(1)  <---------ZAT18    <------------------------ANAC81<---------ARR14(2) -->ANAC46<---------ANAC58   <---------ALFIN1            <---------CCA1(2)      <----------DOF2     < -DOF5.7(2) <------NtERF2  ------>ZmHOX2a(1)       ------>ZmHOX2a(1)       ------>ZmHOX2a(1)  ------>ZmHOX2a(1)   catcgagaaatggcgtcttcttcctcttcctcctcctccttttgcactctctccttcccatttctcttgttttcttcctattctttgtagcctatcctcc  17976000                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                            <---------ETT(1)                                                                         ------->TEIL                                                                      ----------->HVH21            <-                                                                    --------->At4g35610          ----                                                                    <---------At4g35610       <------ <---------DAG2                                                    <---------ANAC46           <------ <----------DOF2                                              <---------ICU4--------->ANAC46<-------- ---------ANAC58             <---------YAB1           ---------->DOF2<----------CDC5  --------->DAG2 ---------ANAC58    <-----------GT1     <----------DOF2--------->DAG2<------NtERF2   ---------->DOF2   ttgctttttttgtgtctgcgttatacaactcattaatggcctctttgaagttgaagaaaagggataatggcgctgaacccgacaagaaaaagctggtcat  17976100                                       ----------->HVH21                                       <------NtERF2                                       --------->ATERF1(1)                                      <-----------HVH21                                      ------>NtERF2                                      <-----------TGA1                                      <---------ATERF1(1)                                     --------->RAP2.3(3)                                     --------->bZIP60(1)                                     --------->O2                                     --------->RAP2.3(2)                                     <---------ATERF1(2)                                     --------->ATERF1(2)                                     --------->RAP2.6(2)                                     --------->ANAC46                                     --------->DEAR3(1)                                     --------->RRTF1(3)                                     --------->RRTF1(2)                                    --------->RAP2.3(1)                                    <------NtERF2                                    --------->ERF1                                    --------->ATERF1(1)                                    --------->RRTF1(1)                                   ------>NtERF2                                   --------->ABI4(1)                      <---------At4g35610                                   <---------ATERF1(1)                 <---------LBD16                                  --------->DEAR3(1)                 <---------ARR14(2)                                  --------->RAP2.3(3)               --------->ATERF1(1)                                  --------->RRTF1(3)               <---------ATERF1(1)                                  --------->RAP2.3(2)              <---------RAP2.6(3)           ------>NtERF2         --------->RAP2.3(1)               ------>NtERF2       --------->ANAC46          --------->ORA47(2)               <---------ANAC58    --------->ARR14(2)           --------->ERF1                   <---------ANAC58    <---------ARR14(2)           --------->DEAR4(2)          <---------At4g35610  <---------MYB52(1)             --------->ATERF1(1)        <---------ARR14(2) --------->LBD16                <---------ATERF1(1)         --------->ARR14(2) --------LBD16         ------>ZmHOX2a(1)   --------->DEAR3(1)--------->At4g35610 ----->DEAR3(1) --------->ARR14(2)<---------DEAR3(1)       <---------CCA1(2)       ------>ZmHOX2a(1) ---WRKY38(1)   <---------ARR14(2)--------->ANAC46    --------->LBD16--------->ARR14(2)          <--- ---WRKY12 ----------->RAV1(1)  <---------RAP2.3(1)   --------->At4g35610------>NtERF2------>ZmHOX2a(1) ---HVH21 --------->DEAR3(1) ------>ZmHOX2a(1)        <---------At4g35610--------->LBD16    ------>ZmHOX2a(1)   cgccggtattcgccaccagttactccttctccttcgccgccgtcaccgtctatttccgctggtatctgccgtctccggctgtctcctcctcatcctcttc  17976200                                                                                          --------->ANAC58                                                                                          <---------ANAC55(2)                                                                                          --------->ANAC58                                                                               --------------->AtSPL8                                                                      --------->ANAC46    --------->ANAC55(2)                                                                      --------->ANAC58   --------->SPL7                                                                   --------->MYB46(3)    ------->TEIL                                                                   <---------ATHB12      <-------TEIL                                            <---------O2           <---------MYB55(2)  <---------SPL7                                 --------->YAB1                   ------>MYB83<---------ANAC58                                 <---------ICU4       <---------SPL7  --------->ANAC58--------->ANAC46                              --------->WOX13(1)    <------NtERF2 -------->P  <---------ANAC55(1)                    ================HOX2a_HOX2a    <-----------HVH21<---------ALFIN1 <---------------AtSPL3                    ------>ZmHOX2a(1)    <---------ATHB12--------->ANAC58     <---------ANAC58                 ------>ZmHOX2a(1)     --------->WOX13(1)--------->ANAC58     <---------ANAC46     <---------ALFIN1        ------>ZmHOX2a(2)--------->ALFIN1    ------>MYB46(1)  ------->TEIL    <- ------YAB1      ===================HOX2a_HOX2a  --------->ATERF1(1)--------->AtMYB61--------------->AtSPL3   tcattctccaccctctctcctcctccattgatccatcataacaatcaagtggccgtcgaacccaatccaaccactccatttcgtgtacccgtacgtaaac  17976300  Previous    Next  AGI:  At4g38390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76270.1); similar to axi 1 [Nicotiana tabacum] (GB:CAA56570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47467.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 17975770    to: 17978374    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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