Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------TGA2(1)                                                                        --------->TGA2(1)                                                                        --------->bZIP60(1)                                                                        <---------bZIP60(1)                                                                     ----------->HVH21                                                                   <---------ANAC55(2)                                                                   <---------TGA1a                                                                   --------->ANAC55(2)                                                                   --------->At4g35610              <                                                        <---------GLK1(2)                          <- ----->MYB46(1)                                         <---------ARR14(2)                        --- ----->MYB83                                            --------->ARR14(2)   --------->At4g35610  <-- -------->MYB52(1)                               <------------CBF  --------->TGA1a               <--- ------>MYB46(3)                           <---------ICU4          <---------O2                  <--- -------MYB55(2)                           <-----------GT1         <---------At4g35610           <--- ----->ANAC58                             <---------ATHB12         --------->O2                  <--- ----->ANAC46                    <---------ICU4<---------ZAT14   ------------->DYT1             <---- ----->ANAC58                 --------->YAB1   --------->ZAT14 <-----------HVH21              -------   cccaactgttctcagagttttactgaaatttctcatcatctctaatcactgcattgtagattctcagtcacatgacatcatctccgatgggaaaacacgg  17948300  <---------WRKY12  <---------WRKY38(1)  <---------WRKY45 --------->WRKY18(1) -----------HVH21 -----NtERF2 --->NtERF2                                              ============================bZIP_DOF -------MYB46(3)      <---------MYB46(3)             <------NtERF2 ------ANAC58       <---------MYB52(1)              --------->LBD16 ------DEAR3(1)<---------ALFIN1                    --------->DEAR3(1)      --------->O2 ------ANAC46 <---------ABI4(2)            <----------DOF2                 --------->TGA1a       <--- ------ANAC58 --------->MYB46(3)           ==========================================bZIP_DOF<------- -----LBD16   <---------MYB55(2)         <---------YAB1  <----------DOF2   ========================== -->ANAC46  <<<<<<<ZML2             <---------ZAT6<---------LBD16          ==========================   cgggtcaaagactagaaccaccgtttgtttatcagatggtgttatctttctcgccggagctttcatgtctcttaccctcgtctggtcttacttctctatc  17948400                                               <---------ARR14(2)                                               --------->ARR14(2)                                           <------NtERF2                                         <---------DEAR3(1)                                        --------->ZAT2                                        <---------ZAT2                                        --------->At4g35610                                      --------->ANAC58                                      --------->O2                                      --------->ANAC58                                    --------->MYB52(1)                                   --------->TGA2(2)                                   ----------->HVH21                                  <-----------TGA1                                  <-----------HVH21                                 <---------bZIP60(1)                                 --------->ANAC58                                 --------->ANAC55(2)                                 --------->bZIP60(1)                                 <---------ANAC55(2)                                 --------->ANAC58        ========================================bZIP_DOF                  ------------>CBF        <----------DOF2      <----------DOF2   --------->GLK1(2)         --------->ANAC58 <-----------GT1         <---------LBD16<---------At4g35610              --------->AtLEC2        <--- -------DOF2  <----------DOF2===================bZIP_DOF                 --------->ANAC58     <------ --CCA1(2)    ==================================bZIP_DOF       --------->LBD16              <-------- =======bZIP_DOF     <-----------HVH21--------->TGA1a        <---------LBD16                --------- ========================bZIP_DOF--------->ANAC46    ------------>CBF    --------->ANAC46--------->LBD16   ttttcaccttctttcactttcaccttcaccggtttacgtcacggctgcgaatcggttcaatgttccggtttaaacatgcaattagaccctcccgagcccg  17948500                    --------->ANAC46                <------ZmHOX2a(2)               --------->ARR14(2)               <---------ARR14(2)               <---------AGP1               <---------ARR11(1)               <---------ARR11(3)              <---------ARR14(1)              <---------CCA1(2)             --------->LBD16               --------->YAB1           <---------LBD16<---------------AGL15                             --------->AHL20(2)           ------>ZmHOX2a(2)              <---------ATHB12              ----------->GT1          <------ZmHOX2a(2)             --------->WOX13(1)         --------->ANAC58  <-----------GT1------>ZmHOX2a(2)    <---------ATHB12             --------->ANAC58 ------MYB52(1)<-----------ARR10    --------->GLK1(1)         --------->ANAC58 ---LBD16<---------ARR14(2)     <---------HSFB2a(2)           --------->ANAC58 -ZAT2   --------->ARR14(2)     --------->HSFB2a(2)           --------->ANAC46              --------- >ZAT2 ----------->ARR10  --------------->AGL15             --------->MYB52(1)     <---------ALFIN1<-   gtttttacgacgatccggatctaagctactcgatcgagaaatcaatcacaaactgggacgagaaacggcacgaatggtttaaatcacacccttcattcaa  17948600                  ------>ZmHOX2a(2)                  ================================HOX2a_HOX2a                 <------ZmHOX2a(2)                 =================================HOX2a_HOX2a                <---------AGP1                <-----------ARR10                <---------ARR11(1)                <---------ARR14(2)                --------->ARR14(2)               <---------ARR14(1)                 --------->REM1(2)               <---------CCA1(2)                 ----------->GT1            <---------LBD16                     --------->LBD16           --------->MYB52(1)               --------->ANAC46    <-------TEIL<---------ARR11(3)         ------>ZmHOX2a(1)                          *TSS --------->LBD16--------->ARR11(3)  ------------>CBF                               ------>ZmHOX2a(1) >AtLEC2 ---------->DOF2--------->YAB1 --------->ARR14(2) ------------>CBF   <-----------GT1 --------LBD16--------->LBD16     <-------TEIL <---------ANAC46           <---------MYB46(3)        -   acccggttcagaaaaccggatcttaatggtaaccggttcacaatcctcgccgtgtaaaaacccaatcggagaccatttgttactcctccgatgtttcaaa  17948700                                                                                                   --                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               <-----                                 <---------ARR11(3)                                          <-------                                 --------->ARR11(3)                                         ---------                             --------->bZIP60(2)                                          <---------LBD16                             --------->ANAC46                                            --------->MYB52(1)                             --------->ANAC58                                         <---------HSFB2a(1)           --------->ANAC58  --------->bZIP60(1)                                      <---------HSFC1(2)           --------->ANAC58  <---------bZIP60(1)                                      --------->HSFC1(2)           --------->ANAC46  --------->ANAC58                                         --------->HSFB2a(1)           <---------YAB1<-----------HVH21                                           <---------ARR14(2) --------->DOF2   --------->GLK1(2)                           --------->LBD16        --------->ARR14(2)   aacaaagtcgattacgctagaatccatggtcacgacatcttctacagcaattctcttcttcatccgaagatgaattcgtattgggcgaaacttccggtgg  17948800   --------->TOE1(2)  <---------At4g35610  --------->At4g35610                    --------->MYB59  <---------ZAT2                         <---------TOE2(3)                                  --------- -------->DOF2       <---------------AGL15                                                  --------- ---GAMYB           ----------------->AGL2                                           --------->ICU4 ----->GT1          ----------------->AGL3                                      --------->ANAC55(2) --->MYB55(2)       <-----------------AGL3                                     <---------TOE2(3) ----MYB46(3)       <-----------------AGL2--------->ANAC55(2)                  --------->MYB59 --MYB52(1)<---------ANAC58           <----------DOF2                       <----------DOF2 <-------- >LBD16    <---------ANAC58<---------TOE2(3)                     <---------TOE2(3)   <---------YAB1   ttaaagctgcgatgcttgctcacccatttatggattgaagctttaggtaattttctcaaacacatttatggattgaagctttaggtaatgaatgagctga  17948900                                            --------->ARR11(3)                               --------->LBD16                              <---------HSFC1(1)                              --------->HSFC1(1)                              <---------HSFB2a(2)                                ------>ZmHOX2a(1) -- >ZAT2                        --------->HSFB2a(2) --------->YAB1                <---------MYB59   <-- >At4g35610                  <---------LBD16<---------ARR11(3)            <---------YAB1       ------ -At4g35610         <----------DOF2--------->MYB46(3)                   <----------DOF2       -------   atttgcatataaaaaatcgatactttcattttccagaacaaaccaagatttagcataaatgttcaaaattgaaactttgattcctaacttcttggaatga  17949000                            <---------WOX13(1)                          --------->ATHB12                         <---------YAB1                    ------>ZmHOX2a(2)                                                     --------->ANAC58                   <------ZmHOX2a(2)                                                      --------->ANAC58                  --------->AGP1   --------->ATHB12                                       --------->ANAC46                  <---------AGP1  <---------YAB1      <---------YAB1                   <------ZmHOX2a(2) ------->YAB1     <---------ARR14(2)        <------MYB83                              --------->ARR11(3) -----TEIL        --------->ARR14(2)        <------MYB46(1)                          --------->GLK1(1) --->ATHB12       --------->ARR11(3)       <---------AtMYB61                       <------NtERF2    - -->ICU4          <---------ARR11(3)       --------->MYB59   ----------->GT1<---------bZIP60(2)    <-   ttcatattgagctagatttagatctgtatgattgatatgatgggtttggtttgtttatgagtagagagaaaatgggtgatgaggcagagatcaaggaaca  17949100                --------->At4g35610                ----------->RAV1(2)              --------->REM1(1)             <-------TEIL         --------->ANAC58         --------->ANAC58    <----------ID1   XXXXXXXXXXXXXXXXXXXXX>MIR167D  --------->ANAC58                            ---------->DOF2             <---------ANAC55(2)  --------->ANAC58              --------->ANAC58                          --------->ANAC55(2)  --------->ANAC46              --------->ANAC46                   ---------->DOF2                <-- --------->DOF2 <---------At4g35610  --------->YAB1       <---------ARR14(2)                      --- --------AHL20(2)               --------->ANAC58          --------->ARR14(2)                 <-------TEIL   tttaaagccacaagcttcatctgaaacaatagacaagaaacataatgtgaaagggaagaggttatggcagaaagtcaagtatcaattggtggagtttcat  17949200  Previous    Next  AGI:  At4g38310.1    Description:  galactosyl transferase GMA12/MNN10 family protein. similar to galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] (TAIR:AT4G37690.1); similar to alpha-6-galactosyltransferase [Nicotiana benthamiana] (GB:CAI11453.1); contains InterPro domain Galactosyl transferase; (InterPro:IPR008630) Range:  from: 17948476    to: 17948838    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g38320.1    Description:  HHP5 (heptahelical protein 5); receptor. similar to HHP4 (heptahelical protein 4), receptor [Arabidopsis thaliana] (TAIR:AT4G37680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63551.1); contains InterPro domain Hly-III related proteins; (InterPro:IPR004254) Range:  from: 17948686    to: 17950516    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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