Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------MYB59 ---------AHL20(2)              ----------->RAV1(2) ---------AHL20(1)            <-----------GT1                                                <------- -------->AHL20(1)         --------->YAB1                                       ----------->GT1 ------->YAB1         --------->ZAT18                           ----------------->AGL3      --------- ------->AHL20(2)  <---------ANAC46      ---------->DOF2  --------->ZAT6        --------->YAB1   attatattctatacataaatcgtgtgcattaataacctgacttcaaagttcaaagtcttaacacttgccataaatgtttcgatagtaatatcaattttat  17948100                                              --------->YAB1                                              <---------ICU4                                        -                                           --------->YAB1                                           -                                          <---------YAB1                                            -                                         <---------AHL20(2)                                       ---                                         --------->AHL20(2)                            <-----------GT1                                <-----------HVH21   <---------DAG2        --------->WRKY38(1)     <--  <------ZmHOX2a(1)   <<<<<<<<<MYB98     --------->AHL20(1)<-----------GT1--------->WRKY12       ---- --AHL20(2)          --------->TOE2(3)  --------->YAB1<---------CCA1(2)   <---------ZAT18        ---- >AHL20(2)          ----------->GT1 --------->ICU4  <----------DOF2     <---------At4g35610      ----   attaggagaaaaactaaaaactatgttaaatctgtgtcagaattataataatccctttatcttaccatacatttagttgactcacatttttacttcatca  17948200                                                                        <---------bZIP60(1)                                                                        <---------TGA2(1)                                                                        --------->TGA2(1)                                                                        --------->bZIP60(1)                                                                     ----------->HVH21                                                                   --------->O2                                                                   --------->At4g35610                                                                   --------->TGA1a                                                                   <---------At4g35610              <                                                        <---------GLK1(2)                          <- ----->MYB83                                            --------->ARR14(2)                        --- -------->MYB52(1)                                      <---------ARR14(2)   --------->At4g35610  <-- ----->MYB46(1)                                  <------------CBF  <---------O2                  <--- ------>MYB46(3)                           <---------ICU4          <---------TGA1a               <--- -------MYB55(2)                           <-----------GT1         <---------ANAC55(2)           <--- ----->ANAC58                             <---------ATHB12         --------->ANAC55(2)           <--- ----->ANAC58                    <---------ICU4--------->ZAT14   ------------->DYT1             <---- ----->ANAC46                 --------->YAB1   <---------ZAT14 <-----------HVH21              -------   cccaactgttctcagagttttactgaaatttctcatcatctctaatcactgcattgtagattctcagtcacatgacatcatctccgatgggaaaacacgg  17948300  <---------WRKY12  <---------WRKY45  <---------WRKY38(1) --------->WRKY18(1) -----------HVH21 -----NtERF2 --->NtERF2                                              ============================bZIP_DOF -------MYB46(3)      <---------MYB46(3)             <------NtERF2 ------ANAC46       <---------MYB52(1)              --------->LBD16 ------ANAC58 <---------ABI4(2)                    --------->DEAR3(1)      ========================== ------DEAR3(1)<---------ALFIN1            ==========================================bZIP_DOF ------ANAC58 --------->MYB46(3)           <----------DOF2                 ========================== -----LBD16   <---------MYB55(2)         <---------YAB1  <----------DOF2   --------->TGA1a       <--- -->ANAC46  <<<<<<<ZML2             <---------ZAT6<---------LBD16          --------->O2      <-------   cgggtcaaagactagaaccaccgtttgtttatcagatggtgttatctttctcgccggagctttcatgtctcttaccctcgtctggtcttacttctctatc  17948400                                               --------->ARR14(2)                                               --------->GLK1(2)                                           <------NtERF2                                         <---------DEAR3(1)                                        --------->ZAT2                                        <---------ZAT2                                        --------->At4g35610                                      --------->TGA1a                                      --------->ANAC58                                      --------->ANAC58                                    --------->MYB52(1)                                   ----------->HVH21                                   --------->TGA2(2)                                  <-----------HVH21                                  <-----------TGA1                                 <---------ANAC55(2)                                 <---------bZIP60(1)                                 --------->bZIP60(1)                                 --------->ANAC55(2)                                 --------->ANAC58                                 --------->ANAC46        ========================================bZIP_DOF                  ------------>CBF        <----------DOF2      <----------DOF2   <---------ARR14(2)        --------->ANAC58 <-----------GT1         <---------LBD16<---------At4g35610              --------->AtLEC2        <--- =======bZIP_DOF     <-----------HVH21--------->O2                       --------->ANAC58     <------ ========================bZIP_DOF--------->ANAC58    ------------>CBF    --------->ANAC46   <-------- -------DOF2  ==================================bZIP_DOF       --------->LBD16              --------- --CCA1(2)    <----------DOF2===================bZIP_DOF     <---------LBD16             --------->LBD16   ttttcaccttctttcactttcaccttcaccggtttacgtcacggctgcgaatcggttcaatgttccggtttaaacatgcaattagaccctcccgagcccg  17948500                    --------->ANAC46                <------ZmHOX2a(2)               <---------ARR11(3)               --------->ARR14(2)               <---------AGP1               <-----------ARR10               <---------ARR14(2)              <---------CCA1(2)              <---------ARR14(1)             --------->LBD16               --------->YAB1           <---------LBD16<---------------AGL15                             --------->AHL20(2)           ------>ZmHOX2a(2)              <---------ATHB12              ----------->GT1          <------ZmHOX2a(2)             --------->WOX13(1)         --------->ANAC58  <-----------GT1------>ZmHOX2a(2)    <---------ATHB12             --------->ANAC58 ------MYB52(1)<---------ARR11(1)   --------->GLK1(1)         --------->ANAC58 ---LBD16<---------ARR14(2)     <---------HSFB2a(2)           --------->ANAC46 -ZAT2   --------->ARR14(2)     --------->HSFB2a(2)           --------->ANAC58              --------- >ZAT2 ----------->ARR10  --------------->AGL15             --------->MYB52(1)     <---------ALFIN1<-   gtttttacgacgatccggatctaagctactcgatcgagaaatcaatcacaaactgggacgagaaacggcacgaatggtttaaatcacacccttcattcaa  17948600                  ================================HOX2a_HOX2a                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                 =================================HOX2a_HOX2a                --------->ARR11(3)                <-----------ARR10                <---------ARR11(1)                <---------ARR11(3)                --------->ARR14(2)               <---------ARR14(1)                 --------->REM1(2)               <---------CCA1(2)                 ----------->GT1            <---------LBD16                     --------->LBD16           --------->MYB52(1)               --------->ANAC46    <-------TEIL<---------AGP1             ------>ZmHOX2a(1)                          *TSS --------->LBD16<---------ARR14(2)  ------------>CBF                               ------>ZmHOX2a(1) >AtLEC2 ---------->DOF2--------->YAB1 --------->ARR14(2) ------------>CBF   <-----------GT1 --------LBD16--------->LBD16     <-------TEIL <---------ANAC46           <---------MYB46(3)        -   acccggttcagaaaaccggatcttaatggtaaccggttcacaatcctcgccgtgtaaaaacccaatcggagaccatttgttactcctccgatgtttcaaa  17948700                                                                                                   --                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               ------                                 <---------ARR11(3)                                          <-------                                 --------->ARR11(3)                                         ---------                             <---------bZIP60(1)                                          <---------LBD16                             --------->ANAC58                                            --------->MYB52(1)                             --------->bZIP60(1)                                      <---------HSFC1(2)           <---------YAB1<-----------HVH21                                            <---------HSFB2a(1)           --------->ANAC58  --------->ANAC58                                         --------->HSFC1(2)           --------->ANAC46  --------->ANAC46                                         --------->HSFB2a(1)           --------->ANAC58  --------->bZIP60(2)                                     --------->ARR14(2) --------->DOF2   --------->GLK1(2)                           --------->LBD16        <---------ARR14(2)   aacaaagtcgattacgctagaatccatggtcacgacatcttctacagcaattctcttcttcatccgaagatgaattcgtattgggcgaaacttccggtgg  17948800   --------->TOE1(2)  <---------At4g35610  <---------ZAT2                         <---------TOE2(3)  --------->At4g35610                    --------->MYB59                                    <-------- -------->DOF2       <---------------AGL15                                                  --------- ---GAMYB           <-----------------AGL2                                           --------->ICU4 ----->GT1          ----------------->AGL2                                      --------->ANAC55(2) ----MYB46(3)       ----------------->AGL3                                     --------->MYB59 --->MYB55(2)       <-----------------AGL3--------->ANAC55(2)                  <---------TOE2(3) --MYB52(1)<---------ANAC58           <----------DOF2                       <----------DOF2 --------- >LBD16    <---------ANAC58<---------TOE2(3)                     <---------TOE2(3)   <---------YAB1   ttaaagctgcgatgcttgctcacccatttatggattgaagctttaggtaattttctcaaacacatttatggattgaagctttaggtaatgaatgagctga  17948900                                            --------->ARR11(3)                               --------->LBD16                              <---------HSFC1(1)                              --------->HSFB2a(2)                              --------->HSFC1(1)                                 ------>ZmHOX2a(1) -- -At4g35610                   <---------HSFB2a(2) --------->YAB1                <---------MYB59   <-- >At4g35610                  <---------LBD16<---------ARR11(3)            <---------YAB1       ------ >ZAT2              <----------DOF2--------->MYB46(3)                   <----------DOF2       -------   atttgcatataaaaaatcgatactttcattttccagaacaaaccaagatttagcataaatgttcaaaattgaaactttgattcctaacttcttggaatga  17949000  Previous    Next  AGI:  At4g38310.1    Description:  galactosyl transferase GMA12/MNN10 family protein. similar to galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] (TAIR:AT4G37690.1); similar to alpha-6-galactosyltransferase [Nicotiana benthamiana] (GB:CAI11453.1); contains InterPro domain Galactosyl transferase; (InterPro:IPR008630) Range:  from: 17948476    to: 17948838    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g38320.1    Description:  HHP5 (heptahelical protein 5); receptor. similar to HHP4 (heptahelical protein 4), receptor [Arabidopsis thaliana] (TAIR:AT4G37680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63551.1); contains InterPro domain Hly-III related proteins; (InterPro:IPR004254) Range:  from: 17948686    to: 17950516    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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