Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      ------>ZmHOX2a(2)                  --------->ARR14(3)                  <---------ARR11(3)                  --------->ARR11(3)                  --------->ARR14(2)                  <---------ARR14(2)           --------->MYB52(1)          ------>NtERF2          --------->ORA47(1)          <---------SPL7         --------->MYB46(3)         --------->DEAR4(1)         --------->DREB2C(2)         --------->DEAR3(1)         ----------->HVH21        --------->RAP2.3(1)        --------->ORA47(2)        --------->ATERF1(1)      ------->GAMYB<------ZmHOX2a(2)                                            <-----------RAV1(1)      --------->DEAR3(1)    <-------GAMYB                                    <-----------RAV1(1)     <------------AtMYB77  <---------DEAR3(2)                               --------->ARR11(3)     --------->MYB46(3)    <---------MYB46(3)                             --------->GLK1(2)     --------->DEAR3(2)   <---------TOE1(2)                              <---------GLK1(2)    <---------At5g28300   <---------TOE2(2)                            --------->LBD16   --------->MYB52(1)   ------------>AtMYB77                          <---------HSFB2a(2) -------GAMYB     --------->AGP1                                      --------->HSFB2a(2) --------MYB46(3) <---------ARR14(3)                               ------>ZmHOX2a(1)           ------ ------->LBD16    <-----------ARR10                              ------>ZmHOX2a(2)             ------ --------DEAR3(2)<---------GLK1(1)                              <------ZmHOX2a(2)              <----- -------TOE2(2)  --------->GLK1(1)                             --------->ARR11(3)      <------NtERF2 -------TOE1(2) ----------->ARR10                              <---------ARR14(2)      ------>NtERF2 ------LBD16  --------->LBD16<---------MYB52(1)  <------NtERF2 <---------ARR11(3)    <---------DEAR3(1) -GLK1(2)--------->WRKY12<---------LBD16------->TEIL           --------->ARR14(2) <---------RAP2.6(2)   ccggttaaccgccgaccggagatcttcgccggttagattacgaacccagtcgggattgtatttgggatcctcccagaatatgttgtggccgcgagcgatg  17945100                                                                                     --------->ZAT2                                                                                     <---------ZAT2                                                                                     --------->At4g35610                                                                                     <---------At4g35610                                                                         <---------ANAC58                                                                         --------->ANAC55(2)                                                                         <---------ANAC55(2)                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                        --------------->AtSPL8      --------->At4g35610                                               --------------->AtSPL3      <---------At4g35610                                              <---------ANAC46   <---------MYB52(1)                                                 <---------MYB52(1)         <--- <---------YAB1     --------->YAB1                                   <-----------HVH21       <------- --->ICU4 ----------->TGA1                                   ------>ZmHOX2a(2)   <-----------HVH21 ----->ARR10       <-------TEIL                           --------->ATHB12<---------SPL7     -------- ----YAB1 ----------->HVH21      >>>>>>>>>>>>>>>>>LFY ----------------->AGL1--------->SPL7   --------   attctgttagctctgacgagattcatcatcttatcagccaatgtgtagttgagtttgccttgatcggactccgtcgcgtaccatttcagctcgttctcga  17945200        <------NtERF2      <---------bZIP60(2)      <---------ANAC58      <---------ANAC46      <---------bZIP60(1)      <---------ANAC58     <------NtERF2                            ----------------->AGL3   --------->ALFIN1                         --------->ARR14(2) <---------ANAC58                  --------->AtMYB61     --------->ANAC58                  <---------ANAC58 <---------ANAC46                -------->P --------->GLK1(2)                              <---------ANAC58 <---------ANAC58                ------>MYB83 ======================================================= ------ARR14(2)          --------->MYB46(3) <---------ARR14(2)  --------->ARR11(3)    <----------DOF2 --HSFB2a(2)------->TEIL------->TEIL       <---------GLK1(2)---------->DOF2     --------->ZAT14 ->HSFB2a(2)<---------ARR11(1)   ------>MYB46(1)         --------->ANAC58       <---------ZAT14 ->HSFC1(1)<---------CCA1(2)    ------>ZmHOX2a(1)   ---------->DOF2            <---------ZAT6   ataccgtggcgtcgaatctcttgacgaaccattcctaccaaaacagaatccgtttaaagaagcaaagacattgttgttttagtgtagactttagcgagtg  17945300                                                                           <----------DOF2                                                                         --------->At4g35610                                                                       ==============================                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                <---------HSFB2a(1)                                   ===============================                --------->HSFB2a(1)                                   --------->CCA1(2)             <------ZmHOX2a(1)                 <------ZmHOX2a(2)     --------->AGP1           --------->ANAC58                   --------->AGP1         --------->ARR11(3)           --------->ANAC58                   --------->ARR14(2)     <---------ARR14(2)     --------------->AGL15                    <---------ARR11(3)     --------->ARR14(2)    <---------ANAC58                          <---------ARR14(2)     <---------ARR11(3)        ------    <---------ANAC58                         --------->At4g35610     --------->ARR14(3)   <---------At4g35610  <-----------GT1         --------->YAB1     --------->GLK1(1)<----------DOF2    <-----------HVH21 ====================MADS_MADS               <---------At4g35610    <---------GLK1(1)     --------->At4g35610   tgttttacttggtaaggaatgtttccaaggatagttttggagatggcagatccaatggggaagtctttagagatctgctctactgtcacctctgctcctt  17945400                         <-------MYC3                         ------->MYC3                         ------->MYC2                         <-------MYC2                        <---------O2                        <---------ANAC55(2)                        --------->O2                        <---------TGA1a                        --------->ANAC55(2)                        ----------->GT1                        --------->ANAC58                        --------->TGA1a                                           ---------->DOF2           <---------MYB52(1)     <-----------GT1                            --------------->AGL15 =================================MYC_MYB                                    ----------->RAV1(1) ------->GAMYB          --------->ANAC58                                    ----------------->AGL3 =HOX2a_HOX2a      ----------->HVH21                                        --------->MYB46(3) =HOX2a_HOX2a   <----------DOF2 <-----------HVH21                         --------->PCF2 >ZmHOX2a(1)    ==================bZIP_DOF                     <---------ZAT6<---------------AGL15   caacgctctctccgttttcttttgacacgtgaattgtcactgctcgttttctcgcttgaaaatgagtgttaagagggaaccacataaagaatacagtttg  17945500                                                                                               ------                                                                                           --------->ARR14(2)                                                        <---------ETT(2)                   <---------ARR14(2)                                                 <------------CBF                       <---------ANAC58                                                -------->ATHB1                    --------->MYB59  <-                                                --------->YAB1                    --------->MYB46(2)                                                --------->ATHB51      <---------STY1(2) <---------ANAC58                     <---------ANAC46          <---------YAB1       ------>ZmHOX2a(1)   <---------ANAC46               --------->ICU4         ----------->GT1   --------->ETT(2)      <---------ZAT6 <-------     <---------TOE2(3)           ----------->RAV1(1) <---------ANAC46 --------->STY1(2)<------NtERF2   cgattttgatgttagaaatgagtgtgtgtattatgcaacatggtaaactattattgtgtcgatagtcttcctagctagaagagttaggcagcgtgtcctg  17945600      ---------->DOF2  --------->TOE2(3)   --------->ANAC58  --------->YAB1 --------->ANAC46  --------->TOE1(3)   --------->ANAC58 >ZmHOX2a(1)     --------->ANAC58                                         <---------TOE2(3)      <--- --------CCA1(2) --------->ANAC58       --------->At4g35610 <------------CBF               <-------TEIL --ANAC46--------->At4g35610            <---------At4g35610 <---------GLK1(2) <------------CBF   ----   tttatcttaacagcggtacaagacaagtatgagttgcatttcagctacaagagagtacaagagattgtctgagattaaggcattgttttgtgatacatca  17945700                                                                           <---------ARR11(3)             --------->YAB1                                             --------->DAG2             <---------ICU4                                            ---------->DOF2            <---------YAB1                      <------ZmHOX2a(1)  <---------TOE2(3)          --------->YAB1                       <----------ID1     ---------->DOF2        <---------ARR11(3)               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <----------DOF2 ------At4g35610                        ---------->DOF2         <---------YAB1     <---------MYB46(3) ----->At4g35610                     --------->AtLEC2        --------->ICU4--------->ARR11(3)      --   gcttaagctatatcatcatcaaaacatgaagaatgctccatgtaaagagaggacaaggttgcagttattaaagaaaagttcttggtggttcttttgggaa  17945800                                                       <---------ALFIN1                                                      <---------ZAT18                                              <-------MYC3                      <---------GLK1(2)                                              ------->MYC3              --------->TGA2(1)                     --------->REM1(1)      <---------TOE1(2)           --------->bZIP60(1)             <---------ANAC58              <-----------------AGL1       <---------TGA2(1)       -----             <---------ANAC58          <-----------HVH21                <---------bZIP60(1)   <------            --------->ATHB12---------->DOF2<---------ALFIN1            --------->MYB59      <-------- -------->DOF2     <---------------AGL15----------->HVH21 <----------DOF2<-----------HVH21  ---------   taaaagaattagattgagtggctacatgaagaaaggagatgtgtcacacgttttggcacactttcttaagagttatgtcacagaaactcattcggataca  17945900     --------->ALFIN1    ------->MYC2    --------->TOE1(2)    <-------MYC2    ------->MYC3                                                       ---------->DOF2    <-------MYC3                                                 <---------At4g35610   <---------ANAC58                                              --------->At4g35610   <---------ANAC58                     <---------At4g35610      --------->ZAT2          ------>ZmHOX2a(1) ---->TOE2(3)                           --------->At4g35610 <---------At4g35610          <----------DOF2 -TEIL                      --------->ZAT14                 --------->ZAT2          --------->bZIP60(1) -ARR14(2)                  <---------ZAT14                 --------->At4g35610     <---------bZIP60(1) >ARR14(2)       ---------->DOF2       ----------->RAV1(1) --------->GLK1(2) ---------->DOF2   ttagaacgtgtgagtgaatcaaagaaacagtgaagagcatgcagcataactcatagaagagaagctgagcttacaaagacaaagtgacatcctttttttt  17946000  Previous    Next  AGI:  At4g38300.1    Description:  glycosyl hydrolase family 10 protein. similar to glycosyl hydrolase family 10 protein [Arabidopsis thaliana] (TAIR:AT4G38650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47361.1); contains InterPro domain Glycoside hydrolase, family 10; (InterPro:IPR001000); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 17944550    to: 17945485    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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