Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ATERF1(1)                                                                                     ------>NtERF2                                                                                    --------->RAP2.6(2)                                                                                    --------->ATERF1(2)                                                                                    <---------ATERF1(2)                                                                                    --------->RRTF1(3)                                                                                    --------->RAP2.3(2)                                                                                    --------->RAP2.3(3)                                                                                    --------->RRTF1(2)                                                                                    --------->DEAR3(1)                                                                                    --------->ANAC46                                                                                    --------->DREB2C(2)                                                                                   --------->RRTF1(1)                                                                                   --------->DEAR4(2)                                                                                   --------->RAP2.3(1)                                                                                   --------->ERF1                                                                                   <------NtERF2                                                                                   --------->ATERF1(1)                                                                                   --------->RAP2.6(1)                                                                                   --------->ORA47(2)                                                                                  ------>NtERF2                                                                                  <---------ATERF1(1)                                                                                  --------->LBD16                                                                             <-------PIF5                                                                             ------->PIF5                                                                            <---------TGA1a                                                                            --------->bZIP60(2)                                                                            <---------O2                    --------->ATERF1(1)                                     --------->ANAC58                    <---------HSFC1(2)                                      --------->O2                    <---------HSFB2a(1)                                     --------->TGA1a                 <------ZmHOX2a(1)                                          --------->ANAC46                 --------->ATERF1(1)                                    --------->ZAT2               --------->ALFIN1                                         <---------ZAT2        --------->ANAC58                                               --------->ANAC46      <-----------RAV1(2)                        --------->RAP2.6(3)   --------->ANAC58 ------>NtERF2     --------->ZAT2 --------->HSFB2a(1)          --------->SPL7        --------->ANAC58--------->DEAR3(1)     --------->At4g35610                        --------->MYB52(1) ------>NtERF2 --------->ANAC46     <---------At4g35610                   --------->ANAC58        <---------At4g35610<------NtERF2     <---------ZAT2 --------->HSFC1(2)     --------->ANAC58     --------->ZAT14--------->SPL7  <---------At4g35610    <---------ANAC58 --------->GLK1(1)   <-------PIF5  --------->ANAC58  --------->At4g35610    <---------ANAC46=============================================bZIP_DOF ->ANAC46     <------ZmHOX2a(1)         <------ZmHOX2a(1)     ------->PIF5<---------ALFIN1    <------ -LBD16 --------->ANAC58 <---------ANAC58---------->DOF2     <---------ANAC46<-----------HVH21-------   atttagcagcagggaaggaggaggcttccttgaaattggtgaggaaagccagacggccatgcctcgtgcagcccagccacgtcccgccgccaacaaggtc  17938000                                     ------>NtERF2                                    --------->DEAR3(1)                                   --------->DEAR4(2)                                   <------NtERF2                                   <---------At4g35610                                  <---------ATERF1(1)                                ------->GAMYB                               --------->ANAC58                               --------->ANAC46                               --------->ANAC58                              ------>MYB83 <-----------HVH21                              ------>MYB46(1)         --------->DEAR3(1) --------->AtMYB61      <---------ALFIN1      --------->DEAR3(1)     ----------->HVH21     <---------MYB55(2)     <---------ALFIN1   <------NtERF2           --------------->AtSPL3     --------->MYB46(3)    <---------MYB55(2) ------>NtERF2            --------------->AtSPL8   ------>ZmHOX2a(1)       --------->MYB46(3)--------->ETT(2)          <---------------AtSPL8 ---ARR11(3)               <---------MYB52(2)<---------ETT(2)    ---------->DOF2 -->ARR11(3)             --------->ANAC46 <-----------RAV1(1)  --------->ANAC46       ---------->DOF2   tcttcctcccaccgtctctccgtcttcccaccaacgcagcgcctctgtcgcccttgacaatttacacaaaagattagtacaatctcatcaaaggaaacga  17938100                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                  <---------MYB46(3)                                                                --------->At4g35610                                                                <---------At4g35610                                                                <---------LBD16                                                             <-------TEIL                            ------>ZmHOX2a(2)                --------->SPL7                          --------->ARR11(3)                 <---------ZAT14                       --                          <---------ARR11(3)             <---------------AtSPL8                    <-                 ----------->RAV1(2)                    --------->DAG2                        -------               <-----------GT1        <-------GAMYB   ---------->DOF2         ----------->RAV1(1)----   ttacagaggggattgaatcacctgttgtgatcttcatctctgttgagaaatagaagaaaagggtacagcggatgcgattgccacagaaatactgctatgc  17938200                                 --------->AtMYB61                                 ------->GAMYB                                --------->MYB46(3)                                <---------ATHB12                             --------->AtMYB61                             <---------MYB111(1)                            <---------MYB55(2)                            --------->MYB46(3)                         ------->GAMYB                        --------->MYB46(3)                        <---------MYB55(2)                        <---------MYB52(2)                       ------>MYB83                       ------>MYB46(1)                      --------->MYB52(1)                     --------->TOE1(2)                     --------->TOE2(2)                    <---------MYB52(2)                    --------->DEAR3(2)                    <---------MYB55(2)                    --------->MYB46(3)              ------>NtERF2------->TEIL   <---------ZAT14             --------->DEAR3(1)------>MYB46(1)     ---------->DOF2                         ---------- ------->KAN4(2)   ------->TEIL-------->P --------->At4g35610<---------CCA1(2)             <--------- --------GLK1(2)<---------MYB52(2)        --------->ZAT14 <------NtERF2        <-----------GT1 -->AtLEC2   ----------->HVH21 ------>MYB83       --------->YAB1      <------------------------ANAC81 --->TEIL  ------>ZmHOX2a(1)--------->DEAR3(2)   <---------ATHB12<----------DOF2 <-----------GT1-----   acattctcttctcctccgacgaaccaacgaaccaaccatctctctgctctaatcaaagtcgtcgtctcttttttttttttttttctccgtcttctactta  17938300                                        --------->ALFIN1                                       <-------MYC2                                       ------->PIF4                                       ------->PIF5                                       <-------PIF4                                       ------->MYC3                                       ------->MYC4                                       ------->MYC2                                       <-------MYC4                                       <-------PIF5                                       <-------MYC3                                     ------------>OsbHLH66                                    <------------OsbHLH66                                     -------                                    <---------ALFIN1                                          <------                                   <---------ZAT2                                             ------>NtERF2                              --------->ANAC58                                               --------         --------->REM1(2)    --------->ANAC58                      <---------WOX13(1)       --------         <---------ZAT14     --------->RAP2.6(3)                  *TSS                       <-------      <---------ANAC46      --------->MYB52(1)                  <---------WOX13(1)           <-------      <---------ANAC58   --------->ANAC46           --------->MYB46(3)       <----------DOF2---------      <---------ANAC58   --------->ANAC58           <---------MYB52(2)--------->ATHB12      <-------- ----->AGL15             --------->ANAC58<-------TEIL          <------------CBF            <---------ATERF1(1) ------AGL15      <---------ANAC58 <------NtERF2  <-----------GT1 --------->ATHB12  ---------->DOF2 ----->DOF2       <---------ANAC58 <---------At4g35610        --------->ATHB12  ---------->DOF2<-----   aagaaactgcgtgtagtttttcttaccacgaaacggcagcacgtgcaggttttaacaaacctctcgattgattgatttgctttaaagaaagctcgccggc  17938400                                                  <----------DOF2                                                 <---------DAG2                                                <------NtERF2                                               ------>NtERF2                                              --------->RAP2.6(2)                                              --------->DEAR3(1)                                              <---------ALFIN1                                              --------->RRTF1(3)                          ----------->STF1    --------->RRTF1(2)                        ----------->HVH21     --------->DREB2C(2)                        ----------->TGA1      --------->RAP2.3(3)                      --------->At4g35610     --------->RAP2.3(2)                      <---------At4g35610    --------->ERF1                    <-----------RAV1(2)      --------->RAP2.6(1)  ----------->GT1   <---------HSFB2a(2)      --------->ORA47(2) -->LBD16         <------ZmHOX2a(2)          --------->RAP2.3(1)         --------->ATHB12 ---ATERF1(1)    --------->ARR11(3)          --------->DEAR4(2)       <---------ANAC58 ->DEAR3(1)      <---------ARR14(2)          --------->ATERF1(1)      <---------ANAC58 ->ATERF1(2)     --------->ARR14(2)          --------->RRTF1(1)      --------->STY1(2) --ATERF1(2)     --------->AGP1              <------NtERF2          ------>MYB83          --------->SPL7 --DEAR3(1)     <---------At4g35610         <---------ATERF1(1)     ------>MYB46(1)      <---------MYB52(1) >ATERF1(1)     --------->At4g35610         <---------RAP2.3(1)   <---------MYB59       <---------SPL7 -LBD16     <-----------HVH21              --------->ANAC46 <---------TOE1(2)--------->KAN4(2)  <---- -NtERF2   --------->WOX13(1)         <---------REM1(2)    <---------ANAC46<---------WOX13(1)   -----   gatgtggtaatatcagtcagatccagatgacgacgttctctacatgcgccgcctttttatcgctggtacctagcttgattgttctctctccgttcgatat  17938500                                     --------->ZAT14                                     <---------ZAT14                                 --------->ZAT6                        --------->HSFB2a(2)                        ------>ZmHOX2a(1)                                                      <-----                        --------->LBD16                 ----------->RAV1(2)                    ------                        ====================================HOX2a_HOX2a                   --------->ETT(2)                        <---------HSFB2a(2)             --------->At4g35610   --------->AHL20(2)                       <---------LBD16    <-----------------AGL3        <----------DOF2   <---------ETT(2) -----YAB1<---------AHL20(2)--------->ARR14(2)          <---------At4g35610   <---------AHL20(2)    < ---->ICU4<-----------GT1   <---------GLK1(1)        <------ZmHOX2a(2)  --------->TOE2(3)--------->DDF1   gattatctatatttacttagctcgtcctggaattcgcactactctcttaaaatggatcatctgatcaaattgtgccttaattttttgacatgtcgacgat  17938600                                 --------->ABI4(2)                                --------->ALFIN1                               <-------GAMYB                       <-------TEIL                              <---------DEAR3(2)                --------->YAB1                              <---------MYB46(3)                -------->HAHB4                             <---------At1g77200               --------->ICU4                   <----                             <---------DREB2C(2)               <---------YAB1                  <-----                             <---------DEAR4(1)       <---------ABI4(2)                        <-----          <---------ZAT6     <---------DEAR3(1)       --------->MYB46(3)                       ------ ----ARR14(2)               --------->DDF1           --------->ANAC58                  <----------DOF2 --->ARR14(2)              <-----------HVH21         --------->ANAC58            <---------ANAC58 ---------AtLEC2          <-----------RAV1(1)        --------->ANAC46            <---------ANAC58   ttgcaggtagtagtgctacatgctgttcatgtcggtggagccattttagagtcacaagcaccgtaatgatacatctccttgaagcttgtcttttggctac  17938700                       <----------DOF2                      *TSS                  <-----------GT1                                                            <-------         <---------AHL20(1)                                       --------->ARR11(3) <------NtERF2         <---------AHL20(2)                                ----------->RAV1(1)       --------->At4g35610         --------->AHL20(2)                       ------>ZmHOX2a(1)  --------------------->WRI1 -----ALFIN1   <---------YAB1                   ----------------->AGL1             --------->SPL7 ----REM1(2)  <---------AHL20(2)           <---------YAB1 --------->MYB46(3)     <---------SPL7------ ----ZAT14    --------->AHL20(2)        --------->ICU4   ------>NtERF2 ---------->DOF2       -------- --->ZAT14  <---------YAB1     <----------DOF2<-----------GT1     <---------ARR11(3) <---------At4g35610   actgtttctattttatttttatactcttttcttctttttgccatgatgtttccttatgcagccacagagaacttaaagcttatcgtccgctgcaagataa  17938800                                                                                                    <        --------->PCF2                                                                         <----- --ARR11(3)                                <------MYB46(1)              <---------TOE2(3)     <------ --->YAB1                     --------->LBD16                     <---------YAB1        <---------DAG2 ->ARR11(3)        ------>ZmHOX2a(1)       <------MYB83    <----------DOF2              <----------DOF2   taatctacaggtcccattctcctcttgttctccagataacttatttggttcaaatatcagactttgctgtgattaagtttttgttatccacttttgcctt  17938900  Previous    Next  AGI:  At4g38260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47527.1); contains InterPro domain Protein of unknown function DUF833 (InterPro:IPR008551) Range:  from: 17936915    to: 17938722    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g38270.1    Description:  GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups. similar to GAUT1/LGT1 (Galacturonosyltransferase 1), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G61130.1); similar to hypothetical protein OsJ_030025 [Oryza sativa (japonica cultivar-group)] (GB:EAZ15816.1); similar to hypothetical protein OsI_032136 [Oryza sativa (indica cultivar-group)] (GB:EAY78177.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47521.1); contains InterPro domain Glycosyl transferase, family 8; Range:  from: 17938366    to: 17941552    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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