Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ------->GAMYB                                 --------->AtMYB61                                --------->MYB46(3)                                <---------ATHB12                             <---------MYB111(1)                             --------->AtMYB61                            --------->MYB46(3)                            --------->DEAR3(2)                         ------->GAMYB                        <---------MYB55(2)                        <---------MYB52(2)                        --------->MYB46(3)                       ------>MYB46(1)                       ------>MYB83                      --------->MYB52(1)                     --------->TOE2(2)                     --------->TOE1(2)                    --------->MYB46(3)                    <---------MYB55(2)                    --------->DEAR3(2)                    <---------MYB52(2)              ------>NtERF2------->TEIL   <---------ZAT14             ----------->HVH21 -------->P --------->At4g35610<---------CCA1(2)             <--------- --------GLK1(2)   ------->TEIL------>MYB46(1)     ---------->DOF2                         ---------- ------->KAN4(2)<---------MYB52(2)        --------->ZAT14 <------NtERF2        <-----------GT1 --->TEIL    --------->DEAR3(1)------>MYB83       --------->YAB1      <------------------------ANAC81 -->AtLEC2 ------>ZmHOX2a(1)<---------MYB55(2)   <---------ATHB12<----------DOF2 <-----------GT1-----   acattctcttctcctccgacgaaccaacgaaccaaccatctctctgctctaatcaaagtcgtcgtctcttttttttttttttttctccgtcttctactta  17938300                                        --------->ALFIN1                                       ------->PIF4                                       ------->MYC4                                       ------->PIF5                                       <-------MYC4                                       <-------PIF4                                       <-------MYC3                                       ------->MYC2                                       <-------PIF5                                       <-------MYC2                                       ------->MYC3                                     ------------>OsbHLH66                                    <------------OsbHLH66                                     -------                                    <---------ALFIN1                                          <------                                   <------NtERF2                                              ------>NtERF2                              --------->ANAC58                                               --------         --------->REM1(2)    --------->ANAC58                      <---------WOX13(1)       --------         <---------ZAT14     --------->RAP2.6(3)                  *TSS                       <-------      <---------ANAC58      --------->MYB52(1)                  <---------WOX13(1)           <-------      <---------ANAC58   --------->ANAC58           --------->MYB46(3)       <----------DOF2<--------      <---------ANAC46   --------->ANAC46           <---------MYB52(2)--------->ATHB12      --------- ------AGL15             --------->ANAC58<-------TEIL          <------------CBF            <---------ATERF1(1) ----->AGL15      <---------ANAC58 <---------ZAT2 <-----------GT1 --------->ATHB12  ---------->DOF2 ----->DOF2       <---------ANAC58 <---------At4g35610        --------->ATHB12  ---------->DOF2<-----   aagaaactgcgtgtagtttttcttaccacgaaacggcagcacgtgcaggttttaacaaacctctcgattgattgatttgctttaaagaaagctcgccggc  17938400                                                  <----------DOF2                                                 <---------DAG2                                                <------NtERF2                                               ------>NtERF2                                              --------->RRTF1(2)                                              --------->RAP2.6(2)                                              <---------ALFIN1                                              --------->RRTF1(3)                          ----------->STF1    --------->DEAR3(1)                        ----------->HVH21     --------->RAP2.3(2)                        ----------->TGA1      --------->RAP2.3(3)                      <---------At4g35610     --------->DREB2C(2)                      --------->At4g35610    --------->ERF1                    <-----------RAV1(2)      --------->RAP2.3(1)  ----------->GT1   <---------HSFB2a(2)      --------->ORA47(2) -->LBD16         <------ZmHOX2a(2)          <------NtERF2               --------->ATHB12 ---ATERF1(1)    --------->AGP1              --------->ATERF1(1)      <---------ANAC58 ->ATERF1(2)     --------->ARR11(3)          --------->RRTF1(1)       <---------ANAC58 ->DEAR3(1)      <---------ARR14(2)          --------->DEAR4(2)      --------->STY1(2) --DEAR3(1)      --------->ARR14(2)          --------->RAP2.6(1)    ------>MYB83          --------->SPL7 --ATERF1(2)    --------->At4g35610         <---------RAP2.3(1)     ------>MYB46(1)      <---------MYB52(1) -LBD16         <---------At4g35610         <---------ATERF1(1)   <---------MYB59       <---------SPL7 >ATERF1(1) <-----------HVH21              --------->ANAC46 <---------TOE1(2)--------->KAN4(2)  ----- -NtERF2   --------->WOX13(1)         <---------REM1(2)    <---------ANAC46<---------WOX13(1)   <----   gatgtggtaatatcagtcagatccagatgacgacgttctctacatgcgccgcctttttatcgctggtacctagcttgattgttctctctccgttcgatat  17938500                                     --------->ZAT14                                     <---------ZAT14                                 --------->ZAT6                        --------->LBD16                        --------->HSFB2a(2)                                                    ------                        ====================================HOX2a_HOX2a                        <-----                        <---------HSFB2a(2)             ----------->RAV1(2)               <---------ETT(2)                        ------>ZmHOX2a(1)               --------->At4g35610   --------->AHL20(2)                       <---------LBD16    <-----------------AGL3        <----------DOF2   --------->ETT(2) ---->ICU4<---------AHL20(2)<---------GLK1(1)           <---------At4g35610   <---------AHL20(2)    < -----YAB1<-----------GT1   --------->ARR14(2)       <------ZmHOX2a(2)  --------->TOE2(3)--------->DDF1   gattatctatatttacttagctcgtcctggaattcgcactactctcttaaaatggatcatctgatcaaattgtgccttaattttttgacatgtcgacgat  17938600                                 --------->ABI4(2)                                --------->ALFIN1                               <-------GAMYB                       <-------TEIL                              <---------DEAR3(2)                -------->HAHB4                              <---------MYB46(3)                --------->YAB1                             <---------At1g77200               --------->ICU4                   <----                             <---------DEAR4(1)                <---------YAB1                  <-----                             <---------DREB2C(2)      <---------ABI4(2)                        <-----          <---------ZAT6     <---------DEAR3(1)       --------->MYB46(3)                       ------ --->ARR14(2)               --------->DDF1           --------->ANAC58                  <----------DOF2 ----ARR14(2)              <-----------HVH21         --------->ANAC46            <---------ANAC58 ---------AtLEC2          <-----------RAV1(1)        --------->ANAC58            <---------ANAC58   ttgcaggtagtagtgctacatgctgttcatgtcggtggagccattttagagtcacaagcaccgtaatgatacatctccttgaagcttgtcttttggctac  17938700                       <----------DOF2                      *TSS                  <-----------GT1                                                            --------         --------->AHL20(2)                                       --------->ARR11(3) <------NtERF2         <---------AHL20(2)                                ----------->RAV1(1)       <---------At4g35610         <---------AHL20(1)                       ------>ZmHOX2a(1)  --------------------->WRI1 -----ALFIN1   <---------YAB1                   ----------------->AGL1             --------->SPL7 ----ZAT14    <---------AHL20(2)           <---------YAB1 --------->MYB46(3)     <---------SPL7------ ----REM1(2)  --------->AHL20(2)        --------->ICU4   ------>NtERF2 ---------->DOF2       <------- --->ZAT14  <---------YAB1     <----------DOF2<-----------GT1     <---------ARR11(3) --------->At4g35610   actgtttctattttatttttatactcttttcttctttttgccatgatgtttccttatgcagccacagagaacttaaagcttatcgtccgctgcaagataa  17938800                                                                                                    <        --------->PCF2                                                                         <----- ->ARR11(3)                                <------MYB46(1)              <---------TOE2(3)     <------ --->YAB1                     --------->LBD16                     <---------YAB1        <---------DAG2 --ARR11(3)        ------>ZmHOX2a(1)       <------MYB83    <----------DOF2              <----------DOF2   taatctacaggtcccattctcctcttgttctccagataacttatttggttcaaatatcagactttgctgtgattaagtttttgttatccacttttgcctt  17938900                             <---------ZAT18                             --------->ZAT14                             <---------ZAT14                             --------->ZAT18    ---------->DOF2                        --------->ZAT14      ------>ZmHOX2a(2)                        <---------ZAT14      ============================HOX2a_HOX2a                     <---------At4g35610    --------->CCA1(2)                     --------->ZAT2         <------ZmHOX2a(2)                     --------->At4g35610    =============================HOX2a_HOX2a                  ----------->RAV1(2)      --------->ARR14(2)                  <---------At4g35610      <---------ARR11(3)                  --------->ZAT2           <---------AGP1                  <---------ZAT2           --------->ARR11(3)                <-----------RAV1(2)        <---------ARR14(2)       <----------DOF2                ================RAV        --------->AGP1  <---------At4g35610               ==============================HOX2a_HOX2a   <---------ZAT14               =====================================HOX2a_HOX2a   ------>ZmHOX2a(1)               ====================================HOX2a_HOX2a  <---------ZAT18    --------->ALFIN1<-----------RAV1(1)   <---------CCA1(2)--------->At4g35610 ----------->GT1 ------ZmHOX2a(1) --------->At4g35610 <------ZmHOX2a(2)    --------->ZAT14   --------->ZAT14 -----DOF2     ------>ZmHOX2a(1)      ===================================HOX2a_HOX2a ----DOF2     --------->TOE2(3)      <---------ARR14(2)    <------NtERF2     <---------ZAT14   taggaggtgtatgcttcctcagctgctgcagtgcactacgatccagatctgaaagtaaggctgcagtcctctttctctgagtagtgaatacaatttgtat  17939000                                                                                     ----------->GT1                                                                          --------->ANAC58                                                                          --------->ANAC46          =                                                                          --------->ANAC58          <                          <-----------RAV1(2)                           <-----------GT1            <-                          <---------LBD16                              --------->ARR14(2)          <-                          ================================RAV   <---------ANAC55(2)  <---------ANAC46               ------------>MYB.PH3(1)                   <-----------------AG       <------MYB83   <-              --------->DAG2                             <-----------------AGL1     <------MYB46(1)--             ---------->DOF2 <------ZmHOX2a(1)     <-------TEIL--------->RAP2.6(3)<--------P       --   ------>ZmHOX2a(1)<---------MYB52(1)        ----------->RAV1(1)      <---------ARR14(2)    --------   gcttcctacttctaataaagctgttatctcaggatgtgaacatagttgcgacatacagtgaccattacggcaatatacgccttggtagggtgaaaatggg  17939100     <-----------GT1  <----------DOF2                                                          <---------ICU4 ------>ZmHOX2a(2)                                                        <---------ATHB12 ====================================HOX2a_HOX2a          <---------HSFB2a(1) ====================================HOX2a_HOX2a         --------->DAG2  ------>MYB83 ------ZmHOX2a(2)                             --------->ANAC46         --------->MYB46(3) --------ARR11(3)                             --------->RAP2.6(2)      <---------MYB111(1) --------ARR14(3)             ------>ZmHOX2a(1)--------->LBD16         <---------MYB59 --------ARR14(2)         --------->ARR14(2) <---------LBD16 <-------TEIL------>MYB46(1) ------->ARR11(3)         --------->GLK1(2) <---------At4g35610  <---------TOE1(2) ------->ARR14(2)         <---------ARR14(2)--------->At4g35610  <---------TOE2(2) ->ALFIN1     <---------TOE1(2)     <---------ATHB12   ---------->DOF2 <---------MYB46(2)   ggatctttcaccttcttgggttttggagaatcctgcctatcaagttagccgcaaaacaaaaggttcgcaggtaccaaacatttcatgttctggtttttag  17939200  Previous    Next  AGI:  At4g38260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47527.1); contains InterPro domain Protein of unknown function DUF833 (InterPro:IPR008551) Range:  from: 17936915    to: 17938722    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g38270.1    Description:  GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups. similar to GAUT1/LGT1 (Galacturonosyltransferase 1), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G61130.1); similar to hypothetical protein OsJ_030025 [Oryza sativa (japonica cultivar-group)] (GB:EAZ15816.1); similar to hypothetical protein OsI_032136 [Oryza sativa (indica cultivar-group)] (GB:EAY78177.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47521.1); contains InterPro domain Glycosyl transferase, family 8; Range:  from: 17938366    to: 17941552    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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