Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ANAC58     --------->ANAC58     --------->ANAC46 >ZmHOX2a(2) ->AGP1                                   ----------->GT1 --AGP1   ----------->GT1              --------->CCA1(2) <---------ARR14(2)                       <-- ->ARR14(2)                          --------->YAB1      --------->ARR14(2)                   ------- --ARR14(2)                         <---------ATHB12 --------->ZAT18                       ---------- ->ARR11(3)                    --------->ANAC58      <---------ZAT18                     <---------ANAC46 --ARR11(3)<------ZmHOX2a(1)   --------->ANAC58      --------->ZAT14                     <---------ANAC58 ->ARR10<-----------RAV1(2) ---------->DOF2          <---------ZAT14      ---------->DOF2<---------ANAC58   tcatcacacaccaggaaaaaatcgaaataccaaaggcaatgatatggtgtaatagtgcagatagtgtcttcttcttgaaagtagttcatgggcttgtaaa  17934900                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                              --------->DAG2               <---------ARR14(2)                                                             ---------->DOF2               --------->ARR14(2)                                                         ----------->GT1                 ----------->ARR10                                                  --------->DAG2                 <---------ARR14(2) --------ID1                                     ---------->DOF2                 --------->ARR14(2) --->DOF2         ---------->DOF2               ---------->DOF2              --------->At4g35610 ->GT1       --------->GLK1(1)           ---------->DOF2<---------ZAT6       <---------At4g35610   gagccaaaaaatgggatttcaaaaggaactagtagcaatggtctaaagacaaaaggcagtggtaaaagtagaaactcacagcggaactgaggcgatctgc  17935000             <---------HSFB2a(2)             --------->HSFB2a(2)         <---------ANAC58         <---------RAP2.6(2)         <---------ANAC58         <---------ANAC46                       <---------ICU4  <---------TOE2(3)      <---------WOX13(1)                     <------ZmHOX2a(1)  <---------TOE1(3)    --------->ATHB12        --------->HSFB2a(2)<---------YAB1   --------->MYB59   <---------YAB1---------->DOF2            ----------->GT1  --------->CCA1(2)   atactgtgattgcgtctggaaaagcctcatctagagaagagaagagaggataattacagacagatttaggttgcagcgatggaatcaatttcagtttcaa  17935100                                                                                             ========                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR14(3)                                                                                         <---------GLK1(2)                                                                                         --------->ARR11(3)                                                                                         --------->ARR14(2)                                                                                         <---------ARR11(3)                                                            <------NtERF2                --------->ARR14(3)                                                           --------->LBD16               --------->AGP1                                                           ------>NtERF2                 <---------ARR14(2)                                                          --------->LBD16              ----------->ARR10                                                          <---------ANAC46           --------->ANAC58                                                          <---------LBD16            --------->ANAC46                                                         <---------LBD16             --------->ANAC58                                                        --------->MYB52(1)     <-----------HVH21    -                            <---------WRKY18(1)         ------>NtERF2         --------->TGA1a------>ZmHOX2a(1)                          <---------WOX13(1)         --------->ZAT2           =======================                    --------->CCA1(2)                <---------At4g35610      --------->ANAC58-------            <------ZmHOX2a(2)                        --------->At4g35610      --------->ANAC58-------           <---------ARR11(3)       <---------REM1(1)<---------ZAT2    --------->GLK1(1)<---------GLK1(1)           --------->ARR11(3)  <---------LBD16    ======================================bZIP_DOF    <    --------->DAG2 --------->ARR14(2)             ---------->DOF2      <---------GLK1(1)--------->GLK1(1)   ---------->DOF2 <---------ARR14(2)        ------->TEIL<---------ANAC46     --------->ANAC46-------   cttcaaaaagcgagatcatcggatatagattgacctggatgtagatgaacatgaaagctgccgggatgagaagaaatctcaagtcacacgagatcctcgc  17935200                                                             --------->ZAT2                                                             <---------ZAT2                        <-                                                             <---------At4g35610                  <--                                   ------>ZmHOX2a(2)  <------NtERF2                               <--                                 --------->ARR14(2)  ------>NtERF2                            <------                                 <---------AGP1      --------->LBD16                          <------              -------->P         <---------ARR14(2)<---------LBD16                            <------      ------>NtERF2 <------ZmHOX2a(2)             ------>NtERF2  --------->STY1(2)           <------NtERF2     --------->ANAC46            <---------ARR11(3)--------->ATERF1(1)                       -------- ==========================HOX2a_HOX2a     <---------MYB46(3)--------->At4g35610             -------- -------->ARR14(2) <---------ARR11(3)  <-----------RAV1(1) --------->ZAT18                  <-------- ======================MYC_MYB  <---------CCA1(2)--------->DEAR3(1)                         ------>NtERF2 -->ANAC58  --------->MYB46(3) <---------MYB46(3)--------->ATERF1(2)             <---------ANAC46<--- -->ANAC58--------->ANAC58    --------->ALFIN1   <---------ATERF1(2)      <------ZmHOX2a(1)--------->DEAR3(1) ---------ARR14(2) --------->AGP1--------->ARR11(3)<------NtERF2 <---------STY1(2)         <---------ANAC46 -->ANAC46--------->ANAC58   <---------MYB52(1) <---------RAP2.6(2)     <---------TOE2(3)  <---------DEAR3(1)   catatcgacgacaaacaaccagatcaaaaccggtggatcttctggtgtttgccgccgggagggagctagctaataaggaagttgtttgaaacggcgtcgt  17935300 ------GAMYB -------ANAC58 -------ANAC58                                                             <---------ZAT2 ---ANAC58                      --------->YAB1                          --------->DEAR3(1) ---ANAC46                      <---------ICU4                     ---------->DOF2 ---ANAC58          <---------MYB52(1)  --------->At4g35610   ----------->TBP ->ALFIN1   --------------->AtSPL3 --------->YAB1           <---------------AGL15 ->ATERF1(1)<---------------AtSPL3<---------YAB1            --------->TOE2(3)                   *TSS ---HVH21 --------->MYB52(1)   --------->ICU4              <-----------------AGL3               ----- ------TOE1(2)     *TSS   ----------->GT1                  ----------------->AGL3   ------>ZmHOX2a(1)   gcgttataacaaaaacggtaccgtttcccagtaaaaatgataagatgaccatttcatttcatccataaatagagccgagcttcttcctctgtaaatctct  17935400                                  --------->ANAC46                                  --------->ANAC58                                  --------->ANAC58                                  --------->ANAC55(2)                                  --------->ANAC55(1)                               <---------REM1(2)                               --------->ZAT14                           --------->ZAT6                          ------>MYB83                          ------>MYB46(1)                        <---------MYB55(2)                        <---------MYB111(1)                        --------->MYB46(3)                    <------NtERF2                        <---------ALFIN1                     ------>NtERF2                        <---------MYB111(2)                 --------->ETT(2)                        --------->AtMYB61                   <---------ETT(2)           ---------->DOF2-------->P              --------->ARR11(3)   ------->GAMYB       --------->MYB46(3)         <---------ARR11(3)  <---------MYB52(2) ----------------------->TaNAC69(2)  <-----------RAV1(1)  --------->MYB46(3)--------->ZAT18              --------->YAB1                    <---------ALFIN1 ------>HVH21       <---------ZAT18             <---------ATHB12          <---------ARR11(3)   <-----   gacaacaaaccaaaaaagagagtccaccaactctacacgcaattcatccaattatcttgctgtcgccattcgccaatatccatccccatcttcttcgatt  17935500                                                                                             --------                                                                                          --------->ARR14(2)          <---------ETT(2)                                                      <-----------HVH21      --------->MYB59                                                         <---------MYB55(2)     <-------TEIL                                                             --------->DREB2C(2)    --------->GLK1(2)                             ------>ZmHOX2a(1)           --------->DEAR3(1)    --------->ARR14(1)                           <---------ALFIN1             --------->MYB46(3)    --------->CCA1(2)                        <---------ZAT2                  --------->DEAR3(2)   <---------ARR14(2)                        <---------At4g35610     --------->RVE1(1)    <---------ARR14(2)   --------->ARR14(2)           --------->HSFB2a(2)              --------->AHL20(2)      <------ZmHOX2a(1)   <---------GLK1(2)<-----------RAV1(2) ------->TEIL          --------->TOE2(3)--------->ANAC46   --------->ARR11(1) --------->At4g35610--------->ZAT2       --------->TOE1(3)--------->ORA47(1) ----GLK1(1)     --------->YAB1 <---------HSFB2a(2)  ------>ZmHOX2a(1)     <---------ALFIN1  --------   tctgagattcggtcgaaaatcatcagatgggttttcagaacgaagctagctcctcctcttatacccttaaaatacctccaccggccagagaggactcgcc  17935600                                                                       <------NtERF2                                                                      ------>NtERF2                                                                     <---------DEAR3(1)                                                                    <------NtERF2                                                                    --------->ATERF1(1)                                                                   ------>NtERF2                                                                   <---------ATERF1(1)                                                                   <---------RAP2.3(1)                                                                   <---------RRTF1(1)                                                                   <---------DEAR3(2)                                                                   <---------ORA47(2)                                                                   <---------ERF1                                                                  <---------At1g77200                                                                  <---------DREB2C(2)                                                                  <---------DEAR3(1)                ------>MYB83                                      <---------RAP2.3(2)              --                ------>MYB46(1)                                   <---------RAP2.3(3)        --------              --------->AtMYB61                                  --------->ATERF1(1)         --------             --------->HSFB2a(1)                                 <------NtERF2               --------        --------->ANAC58                                        <-----------HVH21           ---------        --------->ANAC58                                       --------->ETT(2)           ------>ZmHOX2a(1)     <------NtERF2       --------->ANAC58                      <---------TGA1a            <---------SPL7   <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         ------>NtERF2    <---------ETT(2)          <---------ANAC58   <---------LBD16 <---------ALFIN1  --------->ARR11(3)        <---------ANAC46          <---------ANAC58 ->ANAC58    <---------HSFB2a(1)     <---------ARR11(3)      <-----------HVH21  --------------------- ->ANAC58  <---------PCF5--------->ANAC58    --------->DEAR3(1)======================================   tcttctcggcaagggacctcccctctccagccagtttaagaccttcgccaacgtcttcatcgctgtcgtcggcgctggtgttcttggtcttccttacgcc  17935700                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                           ------>NtERF2                                                                                           --------->LBD16                                                                                           <------NtERF2                                                                                          --------->RAP2.3(3)                                                                                          --------->DEAR3(1)                                                                                          --------->RRTF1(3)                                                                                          --------->ANAC46                                                                                          --------->RAP2.6(2)                                                                                          --------->RAP2.3(2)                                                                                          --------->RRTF1(2)                                                                                         --------->RRTF1(1)                                                                                         --------->RAP2.3(1) -------->DOF2                    ------>ZmHOX2a(1)                                      <------NtERF2 ->ANAC58                        <---------ALFIN1                                       --------->LBD16 ->ANAC46                      ------>ZmHOX2a(1)                                        ------>NtERF2 ->ANAC58                     <---------ALFIN1                                          <---------ATERF1(1) >SPL7--------->MYB52(1)    ------>ZmHOX2a(1)              <---------ATHB12            --------->ANAC46 -->TaNAC69(2)       <---------ANAC58                   --------->MYB46(3)            --------->MYB46(3) =========bZIP_DOF   <---------ANAC58                <-----------GT1  <---------YAB1  <---------LBD16   ttcaagcgaaccggatggctcatgggtgtcctcctcctcgtctccgtctctgttttgacccatcactgtatgatgcttcttgtctatacccgccgcaagc  17935800  Previous    Next  AGI:  At4g38240.1    Description:  CGL1 (COMPLEX GLYCAN LESS, N-ACETYLGLUCOSAMINYLTRANSFERASE I); transferase, transferring glycosyl groups. similar to N-acetylglucosaminyltransferase I [Nicotiana tabacum] (GB:CAC80702.1); similar to alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Nicotiana tabacum] (GB:CAB53347.1); similar to N-acetylglucosaminaltransferase I [Nicotiana tabacum] (GB:CAC80701.1); contains InterPro domain Glycosyl transferase, family 13; (InterPro:IPR004139) Range:  from: 17931564    to: 17935319    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g38250.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT2G42005.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71709.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 17935396    to: 17937062    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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