Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      ---------->DOF2                 <---------AHL20(2)               <---------------AGL15         --------->ARR11(3)         <---------ARR11(3)      <------ZmHOX2a(1)    <---------TOE1(3) <----------ID1                                                              ---    <---------TOE2(3) ----------->GT1                                                             <-- --ZmHOX2a(1) <---------AHL20(2)       <----------ID1                                            ---- --->ICU4--------->AHL20(1)---------->DOF2 ---------->DOF2    ---------->DOF2                   <---- ---TOE2(3)  --------->AHL20(2) ---------->DOF2      <---------ALFIN1    <-----------GT1      <------   attgtgaaggatatattatataaaaagaaaaaagaaaagagaagacaaagatgagccactcgtggaaagtcatttatacctccttgaaatgaagtgatga  17922900                                                                        --------->ALFIN1                       --------->DAG2       --------->ATHB12         <------ZmHOX2a(1)    <---------ATHB12  ---------->DOF2      --------->ICU4         <-----------RAV1(2)  <---------TOE1(2) ------>ARR11(3)   --------->YAB1          <---------YAB1       <-----------HVH21    <---------ANAC58 -------ARR11(3)  <---------YAB1         <---------ICU4    --------->DAG2            <---------ANAC58 ----->GLK1(1)    --------->ICU4         --------->YAB1   ---------->DOF2        <----------DOF2 -----ARR11(3)  --------->YAB1          <---------ATHB12 --------->CCA1(2) <---------ARR14(2) ---YAB1   ---------->DOF2      ---------->DOF2         --------->ARR11(3) --------->ARR14(2)   tatctaatgactccaaagtcataataaagtcaccgaaagtgaatcatgatttgaagaagataaaggagtcaggagtggaactgctttccttggtatgtca  17923000                        --------->bZIP60(2)         <----------DOF2                        --------->REM1(1)           --------------------->WRI1                      ----------->RAV1(1)         <------NtERF2                      <---------ALFIN1           ------>NtERF2                  --------->ATERF1(1)            <---------RAP2.6(3)                  <------ZmHOX2a(1)             --------->RAP2.6(2)                         =========                 <---------ATERF1(1)            --------->DEAR3(1)                          <------ZmHOX2a(2)                --------->ALFIN1               ---------->ID1   --------->TOE2(3)    --------->At4g35610            <---------LBD16--------->YAB1      <---------RAP2.6(2)  ---------->DOF2  <---------At4g35610          --------->ARR14(2)                 <-----------GT1 --------->ARR14(2)     <---------TOE1(1)          <---------ARR14(2)           <---------ATHB12      <---------ARR14(2)  <-----------HVH21   ttccgaagcgccaatacggaggagccacatcataagaggcaatggttttgccgcctttgagagtaacctcgaaagagagagactgtccgatgagatcgag  17923100                                                                           <---------ALFIN1                                                                          <---------MYB55(2)                                                                          --------->MYB46(3)                                                  <---------ANAC58       ------>MYB46(1)                                                  <-----------RAV1(1)    -------->P                                                  --------->ALFIN1       ------>MYB83                                                  <---------ANAC46      --------->MYB55(1)                                                  <---------ANAC58     --------->MYB46(3)           <                                               <---------MYB52(1)      <---------MYB55(2)    <-------                                              <---------RAP2.6(3)      <---------MYB111(1)   --------           --------->ZAT14            <------ZmHOX2a(2)                --------->AtMYB61     ========          <---------ARR14(2)         <---------ARR14(2)                --------->DEAR3(1) --------->PCF2          --------->ARR14(2)         --------->ARR14(2)                <---------MYB111(2)------>NtERF2  <---------ANAC58       <---------ANAC58 --------->ANAC58             <---------MYB46(2)<-----------TCP11(1)  <---------ANAC58       <---------ANAC58 --------->ANAC46          --------->ANAC46<-----------HVH21 <------ZmHOX2a(1)     --------->GLK1(2)  --------->ANAC58      <-----------HVH21  --------->ANAC46 < =======HOX2a_HOX2a   <---------GLK1(2)------>ZmHOX2a(2)       <----------DOF2   <-----------------AGL1   agaggagtgccagttctgtccccagtttctggccattgggatccaagccgttgtgtggcccttcactttcacaccaaccacttccccgtcgaggcccaca  17923200                                                                      ----------->HVH21                                                                      --------->WRKY12                          <---------ZAT2                            --------->TGA1a                          --------->ZAT2                        ----------->RAV1(1)                          <---------At4g35610       --------->ANAC58<---------TGA1a                          --------->At4g35610       --------->ANAC46--------->O2                          --------->HSFC1(2)        --------->ANAC58<---------O2                          <---------HSFC1(2)       ------->GAMYB<---------ALFIN1                     --------->ALFIN1              ===========================MYC_MYB           <---------LBD16--------->GLK1(1)      =============================MYC_MYB        <---------ALFIN1<---------PCF2           -------->P    --------->DEAR3(1) ---------ANAC58  --------->DAG2          <---------GLK1(2)    --------->RAP2.3(3) --ALFIN1 ----------->RAV1(2)         --------->At4g35610    ------>NtERF2      <---------ZAT14 --->RAV1(1)--------->HSFB2a(2)       <---------At4g35610   --------->DEAR3(1) ------>ZmHOX2a(1) =====================RAV <---------GLK1(1)------->TEIL<---------ALFIN1<---------WRKY18(1) ---------ANAC58 ---------->DOF2  --------->WRKY18(1)------>NtERF2<---------ALFIN1               ----   ttgcttatcaacacctggaaaaagtgggagctcccgctcaagctgaatctcaacccgcctctccgcccacacttgaccctcctatactgtataggtatca  17923300                                                                                 --------->ARR14(2)                                                                                 <---------ARR14(2)                                                                               --------->LBD16                                                                           --------->TOE2(2)                                                                           ------->GAMYB                                                                          <---------MYB55(2)                                                                          --------->MYB46(3)                                                                         ------>MYB46(1)                                                                         -------->P                                                                         ------>MYB83                                                                        --------->MYB55(1)                                                                       <---------ALFIN1                                                                       <---------MYB111(1)                                <------NtERF2                          <---------MYB111(2)                               ------>NtERF2                           <---------MYB46(2)                              <---------RAP2.6(2)                      <---------MYB55(2)       -----                             --------->RAP2.6(3)                       <------------AtMYB84     -----  --------->ZAT2          *TSS<---------DEAR3(1)                       --------->DEAR3(1)      ------  --------->At4g35610    --------->REM1(2)                             --------->MYB46(3)      <-----  <---------ZAT2        ----------->HVH21                  <---------HSFB2a(2)--------->ANAC46 <-----  <---------At4g35610  <-----------HVH21                   --------->HSFB2a(2)--------->ANAC55(2)---- ----->At4g35610  <------ZmHOX2a(2)                     <----------DOF2--------->AtMYB61 <------ZmHOX2a(1)   tctcagctctggtttctgcgatccctgtgaaggcggcatgagatagttccaagtgttcctttgggaagttgcaccaacctccgtaatcggaggagagtcc  17923400                              --------->AtMYB61                             --------->MYB46(3)                          ----------->HVH21                          --------->WRKY38(1)                                          <---------HSFB2a(2)                         --------->At5g28300                                     <---------ALFIN1                         <------NtERF2                                          --------->ZAT14                        <---------MYB46(3)                                      <---------ZAT18                       <---------DREB2C(2)                                      <---------ZAT14     <                       <---------ANAC46        <---------ANAC58               --------->ANAC46     --                       <---------DEAR3(1)      <---------ANAC46               --------->ANAC58     <-                      --------->ATERF1(1)      --------------------->WRI1     --------->ANAC58    ---                      <------NtERF2            <---------ANAC58           --------->ANAC46     ------              <---------GLK1(1)    --------->ANAC46         ------>MYB83  --------->ANAC58     <-----        <------ZmHOX2a(1)--------->ATERF1(1) ------>NtERF2  ------>MYB46(1) <---------ALFIN1  ------- ------------>AG      <---------ABI4(1)    --------->ATERF1(1)            --------->ANAC58   -------- ------------>AGL1   ------>NtERF2<---------LBD16          --------->MYB52(1)------->TEIL    -------- ----------->AGL1   ----------->HVH21     --------->At4g35610   <---------ARR14(2)     --------->HSFB2a(2) ------------AG     --------->ALFIN1      <---------ATERF1(1)--------->MYB46(3)--------->DEAR3(1)<--- ------------AGL1   <---------DEAR3(1)--------->ALFIN1    --------->AtMYB61--------->MYB46(3)-------- ----->LBD16  --------->GLK1(1)  <---------ALFIN1 --------->REM1(2)--------->ALFIN1    --------->HSFC1(1)   cgaattgggaggacagaaatcggtggcggtgaccaccacggaggggctgccttgaagacaccaacggatgtggttcacgcaccgcacttctagacaagct  17923500                                                                         ------>ZmHOX2a(2)     --------->At4g35610                           <------NtERF2         ============================  --------->At4g35610                             --------->LBD16       <---------GLK1(1)  <---------ZAT2                                  <---------RAP2.6(3)   --------->GLK1(1)  --------->ZAT2                                  ------>NtERF2         =============================  <---------At4g35610                  <---------ZAT14                  <------ZmHOX2a(2) -----------RAV1(2)                    --------->ZAT18                 --------->AGP1 --------->ANAC58 ------->LBD16                        <---------ATERF1(1)              <---------AGP1 --------->ANAC58 --------At4g35610                   <---------DEAR3(1) <---------At4g35610         ---------->DOF2 ------>ANAC46                      <---------ANAC58    <---------ZAT2 <---------ARR14(2)      ------ --->ARR14(2)                <---------At4g35610 --------->RAP2.6(2)   --------->ARR11(3)   ------>NtERF2 ----ARR14(2)             <-----------------AGL1 --------->ATERF1(2)   <-----------ARR10   --------->DEAR3(1) -->ZAT2               <---------GLK1(2)         <---------ATERF1(2)   --------->ARR14(3) --------->ATERF1(1) ->ANAC58             <---------At4g35610       --------->ATERF1(1)    --------->ARR14(2) --------->DEAR4(2) --->ARR10            --------->ZAT2<---------ANAC58 ---------->DOF2   <---------ARR11(3)<---------ATERF1(1) ------LBD16          --------->At4g35610--------->At4g35610          <---------CCA1(2) ------->GAMYB ->ANAC58  ----------->RAV1(2)<-----------HVH21 <---------LBD16 ------>NtERF2     --------->ANAC46---   ccgcagctgcttcccctgttgaacagcttcccgctcaggcctgcgctgtagccggcaaagctgctctgcctcagatctccatacccacaagcgcctccta  17923600                                                                                            <--------                                                                                           --------->DEAR3(1)                                                                                           --------->RAP2.3(3)                                                                                           --------->RAP2.3(2)                                                                                          <------NtERF2                                                                                          --------->ATERF1(1)                                                                                          --------->RAP2.3(1)                                                                                         <---------ATERF1(1)                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)       <---------ATHB12                                                                --------->ATERF1(1)     --------->WOX13(1)            ---------->DOF2                                     <------ZmHOX2a(1) =HOX2a_HOX2a               ---------->DOF2                                          --------->ALFIN1 =HOX2a_HOX2a             <---------YAB1                                            <------ZmHOX2a(1) >ZmHOX2a(1)           --------->ICU4----------->GT1         ---------->DOF2   <---------ANAC46 ------>YAB1           ------>ZmHOX2a(1)>>>>>>>>>>GT-3b ----------->GT1     ----------->HVH21   tcagaaccaattagtctagttagtcctgatgaaagaagaaagaaaaataggggggagagagagaaaagagaaccagtagcgacggaggaggagccgtctc  17923700                                                             --------->ATERF1(1)                                                             <---------At4g35610                                                             <------NtERF2                                                             --------->At4g35610                                                            ------>NtERF2                                                            ----------->RAV1(1)                <---------MYB46(3)                          <---------RAP2.3(1)                <-----------RAV1(1)                        <---------RAP2.6(2)          <---------ANAC58                                 <---------DEAR3(1)          <---------ANAC58                                 --------->ATERF1(2)      ---------->DOF2                               ---------->DOF2   --------->HSFB2a(2)                          <---------ANAC58   <---------HSFB2a(2)                          <---------ANAC46   <---------HSFC1(1)                           <---------ANAC58<------NtERF2                --------   --------->HSFC1(1)              --------->At4g35610     <---------RAP2.3(2)         <---------ANAC58 -RAP2.6(3) --------->ALFIN1       <---------At4g35610     <---------ATERF1(2)         <---------ANAC58   tgtctctagaaagcgtggctgtggctatcttccagtcatcttcggcagtggcttgaaagaggcggcagagaatgaagaagaggcacaatgcgagttgctg  17923800  Previous    Next  AGI:  At4g38210.1    Description:  ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20). Identical to Expansin-A20 precursor (EXPA20) [Arabidopsis Thaliana] (GB:Q9SZM1); similar to ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16) [Arabidopsis thaliana] (TAIR:AT3G55500.1); similar to unknown [Populus trichocarpa] (GB:ABK93538.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117); contains InterP Range:  from: 17922750    to: 17923967    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g38215.1    Description:  other RNA Range:  from: 17923326    to: 17924246    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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