Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ----------->GT1                                                                           <---------AtMYB61                                                                       <---------TGA1a                                                                       --------->O2                                                                       --------->TGA1a           ----                                                                       ============================bZIP_DOF                                                                       <---------O2              <---                                                                  ----------->HVH21              <---                                                                --------->ZAT2                   <---         ------>ZmHOX2a(2)                                      --------->At4g35610      --------->DAG2     <---------YAB1                 <-----------------AG        <---------At4g35610     ---------->DOF2   <---------At4g35610   <---------TOE2(3)                     --------->GLK1(2)      >>>>>>>>>GATA-1   tcgtctgatgatcccatgctgtctagtgaggttgaacagacaatattgggaagtatacataagagaagctgactcgtgaggttgaatagataaagtgtaa  17914900                                                         <-------GAMYB                                                        --------->MYB52(2)                                                        <---------MYB46(3)                                                        ----------->GT1                                                       <-------TEIL                                                   <---------TOE2(3)     <---------ZAT6                           <---------YAB1--------->AHL20(2)                      < ----->ANAC55(2)                 <-----------RAV1(1)  <---------MYB52(1)                            - ------ANAC58              <---------------AtSPL3 <---------DOF5.7(2)   <---------TOE2(3)           < ------ANAC58<-----------RAV1(1) <---------ZAT6--------->YAB1     <---------YAB1                  <-- ------ANAC55(2)        <---------YAB1 <---------WOX13(1)--------->TOE2(3)    <-----------GT1--------   cgtactagtgtttttttgttgttgttgtaatagtactgttgatggattttgataacgttcgttaaattatgtttatggatttactagttggaaacgagtt  17915000                                                                 <----------DOF2                                                    <---------ARR11(3)                                 ----------->GT1    --------->AHL20(1) -----------TBP              <---------TOE2(3)      <---------AHL20(1)           <---------AHL20(2) -------->AHL20(2)           <---------TOE1(3)      --------->ARR11(3)    --------->At5g28300       < ---------AHL20(2)  <---------ARR11(3)             <---------AHL20(2)    ----------->GT1          <<< -------YAB1        --------->ARR11(3)  <-----------GT1          --------->TOE1(3)              ----- --->GT1     ---------->DOF2<---------DOF5.7(2)--------->AHL20(2)--------->TOE2(3)              <----   atttttatatggaatcaaagaacatcttgttaacgatgttaaaaaccacttaaatattttttgttaactttaaaacggtgaatttaaacgataacattat  17915100                                                     --------->AHL20(2)                                                  --------->WOX13(1)                                                 --------->AHL20(2)                                                 <---------AHL20(2)                                              --------->YAB1                                             <---------YAB1                                            --------->AHL20(1)                                            <---------AHL20(1)                                            --------->AHL20(2)                                            <---------AHL20(2)                                           --------->YAB1      <---------TOE2(3)                --------->AHL20(2)                                       -----  <------------CBF          ------>ZmHOX2a(1)--------->ICU4                        <---------TOE2(3) ---------AHL20(2)      <-----------GT1<---------AHL20(2)                          <---------YAB1   < <<<<<<MYB98        <---------AHL20(2) --------->AHL20(1)                    --------->ICU4     ----- ------>GT1<---------AHL20(2)          <---------AHL20(1)               ----------->GT1         ----- -----YAB1 --------->AHL20(2)         --------->AHL20(2)             ---------->DOF2     ---------->DOF2   gttaaattgagatttaaatgattttttttcctatgggctattaaattataattaatcaaatacaaaacgctgaaaggtaagaattaagaatgaaagaaac  17915200                                                                                         <------NtERF2                                    <------MYB46(1)                               <---------At4g35610                                  <--------P                                      --------->At4g35610                                 <-------GAMYB                                   --------->MYB52(2)                                 <---------ANAC58                              <---------MYB52(1)                           --------->ARR14(2) --------->YAB1             <----------TaMYB80      <---------ANAC58     <---------ARR14(2)<---------YAB1             ---------->TaMYB80  <------NtERF2      <---------ANAC58  --------->LBD16     <-----------GT1             <---------ARR14(2) <--------- ---->ANAC58           --------->LBD16     --------->YAB1               --------->ARR14(2)<---------DEAR3(1) ------NtERF2         <------NtERF2 <------MYB83            --------->LBD16   <-----------HVH21     < ---->ANAC46          <---------LBD16   <----------DOF2     <-----------HVH21<---------ANAC58     --- ---->ANAC58   ---------->DOF2   <---------ANAC58          <---------ANAC46  <---------ANAC58     <--   gcagcgtttcgtttcgacaaagtccccgggttctgggttggccttttatcattttgaatcgccgtgagaagtcgaatatgcgttagatgtcgtcgtcgca  17915300               <-----------RAV1(2)             ------>NtERF2             ----------->RAV1(1)            <---------ALFIN1            --------->RAP2.3(3)            --------->DEAR3(1)           <------NtERF2           --------->ATERF1(1)           --------->ERF1           --------->RAP2.3(1)          ------>NtERF2          <---------RAP2.3(1)          <---------ATERF1(1)         --------->PCF2         <---------PCF2         --------->bZIP60(1)         <---------bZIP60(1)        --------->RAP2.3(1)                                                  --------->ANAC58        --------->ATERF1(1)   --------->ATHB12                      ----------->RAV1(2)       <---------ERF1  ------>NtERF2                                <------NtERF2                ----       <---------RAP2.3(1)    <---------MYB46(3)                   <---------RAP2.6(3)         <-----       <---------ATERF1(1)<------NtERF2                            ------>NtERF2 <---------ALFIN1----      <---------RAP2.3(3) --------->LBD16                         --------->DEAR3(1)    <---------ANAC58      <---------DEAR3(1)--------->ATERF1(1)                       <---------ATERF1(2) ------>MYB83 --------->TOE2(3)<---------ARR14(2)                  --------->YAB1--------->ATERF1(1) <---------ANAC46 --HVH21<------NtERF2<---------RAP2.6(2)             <------ZmHOX2a(2)       --------->ANAC58-------- ---------HSFB2a(1) <-------TEIL<---------WOX13(1)  --------->ARR11(3)     <------NtERF2<---------ANAC58 ------>ARR14(2)  --------->ARR14(2)                <---------ARR11(3)   <---------ANAC46    <------- -------ARR14(2) --------->At4g35610 ----------------->AGL1       --------->ATERF1(2) ------>MYB46(1)   gaaccttggtggcgccaccagatgcggccgggtgattgggccatctttggacaagatcataaaaaatgccgcctggcgcaagcacaccttccttgtttcc  17915400                                                        ------>NtERF2                                                     <-----------HVH21                                                  ------>ZmHOX2a(1)                                                <---------HSFB2a(1)                                                --------->HSFC1(2)                                                <---------HSFC1(2)                                                --------->HSFB2a(1)                           <------                                               <------ZmHOX2a(2)                              -------         --------->ZAT14                    --------->LBD16                                  <-------       --------------->AtSPL8             <---------LBD16<------NtERF2                      <-------- -->NtERF2                           <---------ARR14(2)--------->DEAR3(1)                   <-------- ----LBD16                  --------->ARR11(3)--------->ARR14(2)                       <---------At4g35610 ----->LBD16       --------->ANAC58  --------->ARR14(2)<---------DEAR3(1)        --------->At4g35610 ->ARR14(2)        --------->ANAC58  <---------GLK1(2)---------->ID1         --------->TOE2(2)<------ ----GT1 <---------ZAT14    <---------ARR11(3)<---------ARR14(2)       --------->ZAT6  --------->At4g35610   gcctgtaagtctgtactcgacaagctcgaagctctctccgattctcccgatccttcgtcgcctctcttcggtctcactacctccgatgcagatgccgttc  17915500     <---------ALFIN1   <---------ALFIN1  --------->MYB46(3) <---------At4g35610                                                                               -- ---ARR14(2)                        <---------TOE1(3)                                           ----- -->ARR14(2)                        <---------TOE2(3)                                         <------ --RAP2.6(3)                --------->ARR14(2)                  <----------DOF2              -------- -ANAC58               --------->MYB52(1)               --------->ATHB12              <---------ALFIN1 -ANAC58 ------>ZmHOX2a(1)--------->LBD16         <---------At4g35610  --------->ARR11(3)  <---------LBD16 ---MYB52(1)          <-----------GT1             --------->At4g35610  <---------ARR11(3) ------>ZmHOX2a(1)   ttcagccactccttctctctcttgataccggctatgctaaggttattgagcctgctctcgattgctctttcaagctcttctctctctccctcctccgggg  17915600                                                                                                    <                                                                                                    <                                                                            <------ZmHOX2a(1)     ===                    <---------GLK1(2)                                <---------DEAR3(1)     <--------                ----------->RAV1(2)                              <------NtERF2              <--------           --------->TOE2(1)                                   <---------RAP2.6(2)         <------NtERF2           --------->TOE1(1)                          <---------AtLEC2  <---------ANAC46 --------->ALFIN1     <---------At4g35610                           ------>ZmHOX2a(2)--------->ATERF1(1)--------->ZAT2     --------->At4g35610                           ================================HOX2a_HOX2a    ---    <---------ATERF1(1)                           <------ZmHOX2a(2) <---------At4g35610--------->At4g35610 --------->ARR10<---------At4g35610               =================================HOX2a_HOX2a    === ->NtERF2 ------>ZmHOX2a(1)                      <---------ARR14(2) <------NtERF2      <---------ZAT2 ---DEAR3(1)<-----------HVH21                --------->AtLEC2 <---------LBD16----------->GT1<-------- ->LBD16 <---------ALFIN1       <---------REM1(2)--------->ARR14(2) --------->At4g35610<---------At4g35610   cgaggtctgctcctcgtcccctgattctcttctctacaagctcatccatgcgatctgcaaggtttgcggcatcggcgaggagtcaattgagctggcggtc  17915700                         ------>ZmHOX2a(2)                        ====================HOX2a_HOX2a                        <------ZmHOX2a(2)                        --------->GLK1(1)                       <---------AGP1                       <---------ARR11(3)                       --------->ARR14(3)                       <-----------ARR10                       --------->ARR14(2)                       --------->AGP1                       --------->ARR11(3)                       <---------ARR14(2)                      <---------At4g35610                      --------->At4g35610                      <---------CCA1(2)                   <------NtERF2                   <---------MYB52(1)                  <---------RAP2.6(3)                  ------>NtERF2                  <-----------HVH21                 <---------ATERF1(2)                 --------->RAP2.3(2)                 --------->RAP2.3(3)                 ========================================MYC_MYB                 --------->ATERF1(2)                 --------->DEAR3(1)                 --------->TGA1a                --------->RAP2.3(1)                <------NtERF2                --------->ATERF1(1)               ------>NtERF2               --------->ABI4(1)              --------->RAP2.3(2)              --------->RAP2.3(3)              --------->RRTF1(3)              --------->DEAR3(1)              --------->ANAC46              <---------DEAR3(1)             --------->RAP2.3(1)             --------->ATERF1(1)             --------->ERF1             --------->DEAR4(2)            <---------ATERF1(1)           --------->ANAC46          ------>ZmHOX2a(1)          ======================HOX2a_HOX2a       =========================HOX2a_HOX2a          <---------ANAC58                             <--       ------>ZmHOX2a(1)<---------GLK1(1)            <---------ANAC58                             ---       ========================HOX2a_HOX2a       <-------GAMYB                                   <--- ---------ANAC58--------->RRTF1(1)          --------->ALFIN1                                  <------ ---------ANAC58--------->ERF1--------->ANAC46 <---------ANAC46                               <------ ==============================HOX2a_HOX2a<---------ANAC58                              --------->ARR14(2) -ANAC58  =====================HOX2a_HOX2a<---------ANAC58                              ------->TEIL -DREB2C(2)<---------DEAR3(1)------>ZmHOX2a(1)<------NtERF2             --------->ARR14(2)    <------NtERF2 --->ZmHOX2a(1)<---------ATERF1(1)   ------>ZmHOX2a(1)                  <---------ARR14(2)  <-------- ===============================HOX2a_HOX2a--------->LBD16             <------ZmHOX2a(1)<---------ARR14(2) -ANAC58 <---------ALFIN1===================HOX2a_HOX2a --------->At4g35610            <---------CCA1(2)   cttcgtgtcctcctcgccgccgtcagatctcctcgcatcctaatccgtggcgattgtttgctccatctagtcaggacctgctacaatgtgtatctcggcg  17915800  Previous    Next  AGI:  At4g38200.1    Description:  guanine nucleotide exchange family protein. similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT3G60860.1); similar to EDA10 (embryo sac development arrest 10), guanyl-nucleotide exchange factor [Arabidopsis thaliana] (TAIR:AT1G01960.1); similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT4G35380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47550.1); similar to putative guanine nucleotide-exchange protein GEP2 [Oryza sativa (japonica cultivar-group)] (GB:BAD35378.1); similar to putative guanine nucleotide-exchange protein GEP2 [Oryza sativa (japonica cultivar- Range:  from: 17915287    to: 17922726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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