Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   ----------->HVH21                    >>>>>>>>>TBF1                            ------>NtERF2               <---------ANAC46                             --------->RAP2.6(2)              <------NtERF2                                --------->ATERF1(1)             <------MYB46(1)              ---------->DOF2  <---------RAP2.6(2)             <------MYB83             --------->ANAC58    --------->At4g35610            <---------DEAR3(1)        --------->ANAC58    <---------At4g35610 ---->GT1  <--------P          --------->ANAC58          --------->ALFIN1 --TOE2(3)<---------ANAC58     --------->ANAC58         <------ZmHOX2a(1)             --------->DAG2 ->DAG2   <---------ANAC58     --------->ANAC46  <---------ZAT14 ----------->TGA1    ---------->DOF2   gaagaaggcatgggttggcgaagaagaaactccaagacagaagcaaaagagtgaagaaggagcggccatgacgaagaatttagttggaaaagtagacgag  17895700                                                    --------->ANAC58                                       ===================================HOX2a_HOX2a                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                      ====================================HOX2a_HOX2a                                     <---------ARR11(3)                                         -----                         ---------->DOF2        --------->YAB1                             ----------                       --------->AHL20(2)    --------->YAB1                              --------->At4g35610           ------->TEIL--------->YAB1--------->ARR11(3)                                <-----------RAV1(2)           --------->ARR14(2)       --------->GLK1(1)                                ----------->RAV1(1)           <---------ARR14(2)   <------ZmHOX2a(1)   --------->ANAC58              --------->ANAC58           --------->GLK1(2)    ==============HOX2a_HOX2a  --------->ATHB12       --------->ANAC58  -          <---------CCA1(2)     =============HOX2a_HOX2a   -------->HAHB4         --------->ANAC46---      ----------->GT1  <---------AHL20(2)   --------->AHL20(2)     <------ZmHOX2a(1) ------->TEIL <--   --------->YAB1   --------->YAB1  <---------GLK1(1)     --------->ICU4   <------ZmHOX2a(1)    -----   cacaaacatcgtgaatctggattaataaaaaggaggagagatcccattaataacaaggaaatgatgggaggagagaaggagaagacgcaccagttgacaa  17895800                                                                                           <------MYB46(1)                                                                                           --------->At4g35610                                                                                      --------->ALFIN1                                                                                  --------->ZAT14                                                                                  <---------ZAT14                                                                                ------->MYC2                                                                                ------->MYC3                                                                                ------->PIF5                    <-----------HVH21                                       --------->At4g35610                 ===============HOX2a_HOX2a                                 <---------At4g35610     -                 ------>ZmHOX2a(2)                                          <---------ZAT2 <---------At4g35610       ----------->HVH21                                                  <---------ZAT18  <------MYB83 ---->ANAC58    ================HOX2a_HOX2a   ------>MYB83   --------->ANAC46   <-------MYC3       -- ->HVH21--------->CCA1(2)<------ZmHOX2a(1)    ------>MYB46(1)--------->ANAC58   <-------MYC2   ------ ---------->TGA1<------ZmHOX2a(2)          ----------------->AG    --------->YAB1 --------->ZAT18 --- ------>YAB1   --------->ARR14(2)          ----------------->AGL2--------->MYB52(1) <---------ANAC46- -------ICU4   <---------ARR14(2)  <----------DOF2           --------->ANAC58   <-------PIF5 -------- ---->ANAC58  --------->GLK1(1)  --------->At4g35610    <------ZmHOX2a(1) --------->ZAT18 <---------DEAR3(1)   gtatgacgagagacagggatccagtcaggaccatcagctttggaaaccaaatcgagcaggaacaagcaatcggaagtgagctcgtgcagtgggaggtgag  17895900                                                                      <---------ANAC46                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                    <---------ZAT14                                                                    --------->ZAT14                                                                   --------->ALFIN1                                                                  <-------GAMYB                                                                  --------->ATERF1(1)                                                                 <---------DEAR3(2)                                                                 <---------MYB46(3)                                                                <---------DREB2C(2)                                                                <---------ANAC46                                                                <---------AtMYB61                                                                --------->ALFIN1                                                                <---------DEAR3(1)                                                               <---------ABI4(1)                                                               <------NtERF2                                                              <---------RAP2.6(1)                                                              <---------DEAR4(2)                                                              <---------RAP2.3(1)                                                              <---------ERF1                                                              <---------ORA47(2)                                                              <---------ATERF1(1)                                                              <---------RRTF1(1)                                                              ------>NtERF2                                                             <---------RAP2.3(2)                                                             <---------RAP2.3(3)                                                             <---------RRTF1(2)                                                             <---------RRTF1(3)                                                             --------->DEAR3(1)                                                             <---------DEAR3(1)                                                             --------->ATERF1(2)                                                             <---------ATERF1(2)                                                  ------->GAMYB--------->ATERF1(1)                                               ----------->RAV1(1)<------NtERF2                                            --------->ANAC58--------->ATERF1(1)                                            --------->ANAC58<---------ABI4(1)                                         ------>ZmHOX2a(1) <---------ATERF1(1)           --------->DAG2              ------>ZmHOX2a(2)  --------->DEAR3(1)          --------->MYB52(1)           ======================HOX2a_HOX2a     <------NtERF2                    <------ZmHOX2a(2)  --------->DEAR3(2)  <------NtERF2                       =======================HOX2a_HOX2a--------->ALFIN1 -------->ANAC58                     <---------GLK1(2)   --------->MYB46(3)         <---------ANAC58 ------->RAP2.6(3)                   --------->ARR14(2)  --------->ATERF1(1)        <---------ANAC58 ----->ARR10                         <---------ARR14(2) --------->MYB52(1)      --------->ARR11(3) ------>CCA1(2)                      <---------ARR11(3)<---------ARR14(2)     <---------TOE2(3) -------->ANAC58                     --------->ARR11(3)--------->ARR14(2)<---------MYB46(3) ->ALFIN1--------->CCA1(2)         ----------->ARR10  <------ZmHOX2a(1) <---------AtMYB61   agacggcagagataagggaatgggattgagagaagagtagatcctcgagcaacagaggaaccggcggcggtggagtggttgagatttcgtccctgagaga  17896000                                           --------->LBD16                                           --------->At5g28300                                          <---------ANAC46                                         <------NtERF2                                        ------>NtERF2                  ------>MYB46(1)       <---------RAP2.6(3)                  ------>MYB83         <---------ATERF1(2)                --------->AtMYB61      --------->ATERF1(2)              ------>NtERF2           --------->RAP2.3(1)             --------->DEAR3(1)       --------->ERF1             <---------ALFIN1         --------->ATERF1(1)           <------NtERF2             <---------ATERF1(1)           ------>NtERF2             --------->At4g35610           <---------ATERF1(1)    <---------HSFC1(2)          --------->RAP2.6(2)     --------->HSFC1(2)          --------->ANAC58        --------->HSFB2a(1)          --------->ANAC46        <---------HSFB2a(1)          --------->ANAC58        <---------ZAT2         --------->SPL7           <---------At4g35610                       --------->ANAC58        --------->ATERF1(1)       --------->At4g35610                       --------->ANAC46       --------->ORA47(1)         --------->ZAT2                            --------->ANAC58       <---------ATERF1(1)       ------->TEIL                    --------->LBD16       <-----------HVH21    <---------WRKY18(1)                 --------->LBD16       ------>NtERF2   --------->ANAC46--------->RAP2.6(2)     <---------LBD16       <---------SPL7  --------->ANAC58--------->RAP2.3(2)     --------->HSFB2a(2)            <------      --------->DEAR3(1)   ----------->HVH21                   <---------HSFB2a(2)--------->YAB1   --------->ANAC58    --------->ANAC58--------->DEAR3(1)      --------->LBD16   <---------ATHB12   --------->ANAC58  <---------ALFIN1------>NtERF2            <---------LBD16  --------->WOX13(1)   gagaaacgccgtccgccaccttcccacgcttgacgaagctgccgccgtgaacatgtttcagtctcccgggaaaaaactaagcaatcaaaaacgagaacga  17896100                                                                                                    -                                                                                                    -                                                                                                   <-                                                 <---------AHL20(2)                               <--                                                 --------->AHL20(2)              <------ZmHOX2a(1)---                              ---------->DOF2<---------AHL20(2)      <------------CBF            ----                          <---------ZAT6     --------->AHL20(2)   <---------ATHB12             <----- *TSS            ----------->GT1       <-----------GT1            ------------>CBF     --------->ARR11(3) ----ID1      --------->CCA1(2)      --------->GLK1(1)   <---------ZAT6  <---------ZAT6<---------ARR11(3)   cgagagacagacagagagacgcttaatagtcttaaagggatttacatttttttaatttagagttagaaatcaattgtgttacaggaaaacatcttctcca  17896200                                                                             ------>ZmHOX2a(2)                                                                           <---------ARR14(2)                                                                           --------->ARR11(3)                                                                           --------->ARR14(2)                                                                           <---------AGP1   --------->ZAT14                                                         <---------ARR14(3)   <---------ZAT14                                                         <-----------ARR10 --------->O2                                                              <---------ARR11(3) --------->TGA1a                                                      --------->ANAC58 --------->ANAC46                                                     --------->ANAC58             <- --------->bZIP60(2)                                             <---------At4g35610               -- ----->MYB83                                                     --------->At4g35610      <---------ATHB12 ----->MYB46(1)              <---------ANAC58                  <---------MYB46(3)       --------->WOX13(1) --------ALFIN1              <---------ANAC58               <---------ANAC46<------ZmHOX2a(2)      -- -------MYB55(2)             <---------ANAC46               <---------ANAC58<---------GLK1(1)  ------ ------>MYB46(3)     --------->ATHB12                       <---------ANAC58--------->GLK1(1) <------ ----->ANAC46       <---------YAB1                   <---------AHL20(2)   <---------CCA1(2)   ------- ----ALFIN1         <-------TEIL               <----------DOF2--------->ALFIN1      ------>NtERF2 ---   cccacttcactagttgatgatgttcattgctgcgtttagcacatcaattctttatttttttggggtgggcagacgcagatctcttcggcccaatcaataa  17896300                                                                        --------->LBD16                                                                       <---------ANAC58                                                                 <---------ANAC55(2)                                                  --------->ANAC58     <---------ANAC58       ---------->DOF2                   --------->WOX13(1)      --------->ANAC55(2) --------AHL20(1)                       <---------ICU4          <-------TEIL ------->AHL20(1)                      <---------YAB1       <---------ICU4 ------->ARR11(3)                    --------->YAB1        --------->AHL20(2) --->YAB1                         <---------CCA1(2)    --------->MYB46(3)          ------>ZmHOX2a(1) ---ATHB12                      --------->YAB1    --------->AtLEC2  --------->ARR14(2)              < -->AHL20(2)                 <---------CCA1(2)    --------->ANAC46  <---------ARR14(2)              < ------>AHL20(2)         <-----------HVH21        --------->ANAC58 <---------GLK1(1)           <-----   atatatagcaaaaggaatagctcgtcttgtcatatcatatcatcattcagacatgcaacgaataaatacatatccgtgctcaatcctctaaaacagagga  17896400                                                                         --------->HSFB2a(1)                                                                         --------->At4g35610                                                                         <---------HSFB2a(1)                                                                         --------->ZAT2                                --------->ANAC58                --------->AHL20(2)                <--                      <---------GLK1(2)                         <---------ARR11(3)   <---------TOE2(2)                    --------->LBD16----------->RAV1(1)        --------->ANAC58       <---------TOE1(2) ---------ANAC58   <---------HSFB2a(2)                --------->DAG2     <---------HSFC1(2)       --- ---------ANAC58   --------->HSFB2a(2)      <---------WOX13(1)--------->ANAC58--------->LBD16    <--- -ZmHOX2a(1) --------->MYB46(3) --------->ANAC58     ---------->DOF2     --------->HSFC1(2)   <------ZmHOX2a(1)   gtgcttacaacaacaacaactccagaaacttaactagcaacatttgatagacagaaaaagtagcaagaaattagaagctccgagtcttatgttttaggag  17896500               <---------ALFIN1             --------->DEAR3(1)            --------->PCF2            --------->ANAC46           ------>NtERF2          --------->DEAR3(1)          <---------ALFIN1         --------->ATERF1(1)        <---------ATERF1(1)      <---------ZAT2      <---------At4g35610      --------->At4g35610      --------->ZAT2     <---------ATERF1(1)   ----------->RAV1(2)     ---------->ID1                                                      ------ --------->ANAC58        --------->MYB52(2)                        <---------ALFIN1           <------ --------->ANAC58        <---------MYB46(3)                ------>ZmHOX2a(1)                --------- -------ARR14(2)   --------------------->WRI1         <---------ANAC58                  --------->TOE1(2) ------>ARR14(2)------>NtERF2                 <-----------GT1<---------ALFIN1     ------>ZmHOX2a(1) ---ZmHOX2a(1)--------->MYB46(3)   ------>ZmHOX2a(1)  <---------ANAC58          ----------->RAV1(2) <   gaaacgcctgctccgccccacccttgtttgttccttcctcttccattttcacacttgcttcctccactcccactgggtttactcctgtaacctgcaatca  17896600  Previous    Next  AGI:  At4g38120.1    Description:  binding. similar to hypothetical protein OsJ_025022 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41539.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357) Range:  from: 17888513    to: 17896101    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g38130.1    Description:  HD1 (HISTONE DEACETYLASE19); histone deacetylase. Identical to Histone deacetylase 19 (HDA19) [Arabidopsis Thaliana] (GB:O22446;GB:Q0WWG3;GB:Q9SZL3); similar to HDA6 (HISTONE DEACETYLASE 6), histone deacetylase [Arabidopsis thaliana] (TAIR:AT5G63110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47564.1); similar to histone deacetylase [Mesembryanthemum crystallinum] (GB:AAF82385.1); similar to unknown [Populus trichocarpa] (GB:ABK95294.1); contains InterPro domain Histone deacetylase; (InterPro:IPR003084); contains InterPro domain Histone deacetylase superfamily (InterPro:IPR000286) Range:  from: 17896286    to: 17899485    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version