Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                         <----------DOF2                             --------->ANAC58                                       <---------WOX13(1)        <---------YAB1       --------->ANAC58                                     --------->ATHB12      --------->YAB1       <------ZmHOX2a(1)                                     --------->ICU4<-----     <---------YAB1   ----------->RAV1(1) <---------ANAC46                       <---------YAB1<----- --->TEIL            ----------->HVH21    <---------LBD16   <------ZmHOX2a(1)  --------->CCA1(2)  <--   atcgagtatgatgaaaccatgatgcgacaggacgaaaatcgatagcgggaagtggtattggaggaatgcaagagacacaagagatgattgactttgcggc  17852000                                          <---------ANAC55(2) --RAP2.3(2)                              <---------ANAC46 --RAP2.6(2)                  <---------ARR14(2)       XXXXXXXXXXXXXXXXXXXX>MIR169A -LBD16                       --------->ARR14(2)    ------>NtERF2 >RAP2.6(3)                  <---------CCA1(2)     --------->DEAR3(1)                             <-- ----At4g35610            <------ZmHOX2a(2)        --------->ANAC46                 <---------ARR11(3) -NtERF2  ---------->DOF2--------->ARR11(3)        --------->DREB2C(2)              --------->ARR11(3) ----NtERF2              <---------ARR11(3)     <---------ALFIN1      ---------->DOF2          <-----   agagcatggcataaaagcagaaattgagatcatatccatggattatgtgaacaccgccatggatagacttgccaaaggggatgttagatatcgatttgtc  17852100                                      ---------->DOF2                                     --------->AHL20(2)                                     <---------AHL20(2)                               ------>ZmHOX2a(2)                                                 <---                               --------->YAB1                                       ----------->RAV1(1)                             <---------ARR11(3)                            <---------GLK1(1)   <----- -------WOX13(1)     --------->At4g35610                            --------->GLK1(2) --------->ANAC46 ----YAB1            <---------At4g35610                     --------->YAB1--------->GLK1(1)   <-----   attgacatttctaatacattggctgctactcgatcttaattaaagtcgatgttctatatgtattcaaaataatctggatttcaatcccacaaaacttaag  17852200                                                                                                   --                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---               --------->AHL20(2)                                                                ----           <---------AHL20(2)                                                                    <---           --------->AHL20(2)                                                                    ====         <---------AHL20(2)                                                                      <---         --------->AHL20(2)                                                                      ----       <---------AHL20(2)                                                                        <---       --------->AHL20(2)                                                                        <---     --------->AHL20(2)                    <---------ZAT14                                       <---     <---------AHL20(2)                    --------->ZAT14                                      <----   --------->AHL20(2)       <---------AHL20(2) <<<<<<<<<<WRKY63                                ------   <---------AHL20(2)      --------->AHL20(2)----------->GT1                                  ------- ---ZmHOX2a(1) <---------AHL20(2)       <---------ANAC46         <---------YAB1               <------ ----TOE2(3) --------->AHL20(2)  <---------AHL20(2) <---------AHL20(2)                        ------- ----TOE1(3) <---------AHL20(2)  --------->AHL20(2) --------->AHL20(2)                      ---------   gatatatatatatatatatatatagtctattttatataaatggagtatagtcaaataaatatgcattatcaacgatatatagtcttctattacatagata  17852300           --------->MYB55(1)          --------->MYB46(3)      <---------ZAT14      --------->ZAT14      --------->ZAT18      <---------ZAT18 ------->ALFIN1 ------>TOE1(2) ------ANAC58 ----->O2 <---------MYB55(2) ------TGA1a ----->TGA1a         <-------TEIL ------ANAC58       --------->ARR14(1) ===================================MYC_MYB ------ANAC55(1)    --------->CCA1(2) ----->ANAC55(2)   --------->ARR11(1) ------ANAC55(2)   --------->ARR14(2)                                                            <--- ------O2--------->ANAC58   <-------GAMYB                                                       ----- ------ANAC46      <---------ARR14(2)                                             --------->ATHB51 ---TEIL --------->ANAC46  <------MYB46(1)       <---------ICU4                   -------->ATHB1----- --->CCA1(2)     ----------->ARR10              <---------YAB1                    --------->ATHB12 -->ARR14(2)------>MYB46(1)<------MYB83------------>CBF                    <------------CBF    <----- ---ARR14(2)------>MYB83<---------MYB52(1)      ------------>CBF     <----------ID1            <----- -->ARR11(1)--------->MYB52(1)       --------->ANAC58        --------->HSFB2a(2) <---------YAB1------ -->ARR10--------->ANAC58<-------TEIL--------->ANAC58        <---------HSFB2a(2)<----------DOF2------   cgtgggagttcacccaacgtagatacgttcggttgaaacaagtcaatttcatcaatgcctcttccaaaaaaaaaacaaattgcattattgatgaacacat  17852400                                                                          <---------MYB52(1)  -------   --------->ICU4                                             <---------ARR14(2)             ------->PIF5   <---------YAB1                                             --------->ARR14(2)             <-------MYC2 <--------HAHB4                                            --------------->AGL15             <-------MYC3 --------->YAB1                                            <---------------AGL15             ------->MYC3 <---------ICU4                                   --------->ZAT6       --------->ICU4        ------->MYC2 ----TEIL                                         --------->ANAC46     --------->MYB46(3)    <-------PIF5 ---->ANAC58      <-------GAMYB                 --------->YAB1--------->AGP1                <-------- ---->ANAC58     ----------->GT1               <---------ATHB12      <-----------GT1        <-------- --MYC3          <------MYB46(1)             --------->WOX13(1)<------ZmHOX2a(2)            <-------- --MYC2          <------MYB83            --------->ANAC58 ----------------->AGL1            --------- ->MYC3          <---------MYB46(3)      --------->ANAC58 ----------------->AGL2            --------- ->MYC2        <--------P          *TSS---------->DOF2   --------->MYB52(1)          --------->AHL20(2)   gcatcattatcaaataggttggttaaaatgaccaagatgactaaagccaatcacactactaccagatcgagtaaccattagggaccattaattcacgtgg  17852500                                                                 <---------HSFB2a(2)                                --------->ANAC46              <---------ARR14(2)                                --------->ANAC58              --------->ARR14(2)                                <---------ANAC55(2)         <---------DEAR3(2)                           <---------------AtSPL8          ------>ZmHOX2a(2)                           <---------------AtSPL3          ==========================HOX2a_HOX2a ----------->GT1       --------->AHL20(2)                <---------ARR14(2) -->ALFIN1             <---------AHL20(2)                --------->ARR14(2) -O2  --------->ARR14(2)   <---------ICU4  ------>ZmHOX2a(1)<---------MYB46(3)      <---------AHL20(2) -TGA1a        ------>ZmHOX2a(1)--------->ANAC58--------->YAB1<---------TCP20      --------->AHL20(2) -ANAC46      <---------ANAC58  --------->ANAC55(1)--------->ARR14(2)       <---------ANAC46 <------- >O2  <---------ARR14(2)  --------->ICU4   =======================HOX2a_HOX2a ------>ZmHOX2a(1) <---- >TGA1a       <---------ANAC58  --------->ANAC55(2)<---------ARR14(2)  <---------ICU4       ---------   acgtagtgaatatggtccttgtgaattaatgagtacgtaattgtcctcattcatatatggatcggttccacaaacatttcctgtataaaattctacatct  17852600                 <---------REM1(2)                 --------->ZAT14                 <---------ZAT14       <---------ICU4       <--------HAHB4                                                                <---------ANAC46      --------->ICU4                                                   <-------TEIL  <---------ANAC58      <---------YAB1                                                --------->HSFB2a(1)    --------->YAB1                                     <-----------------AGL1        <---------ANAC58 ------>ZmHOX2a(1)<---------ALFIN1                    <-----------GT1 --------->ARR11(3)     <------- --ARR11(3)  --------->ZAT6                           <-----------------AG          <------NtERF2<--- ------DOF2<-----------GT1                       --------->AHL20(2) <---------HSFB2a(1)<-------GAMYB >REM1(1)<---------YAB1    <---------CCA1(2)    <---------YAB1     --------->DAG2<------ZmHOX2a(1) <-   ttcctctcattattatctctacacttctcatctctcaatcccattcgcttattatttatccatatgggaaaggttcttgagaaggaggcgtttggattgg  17852700          --------->GLK1(2)                                                                         <          ------->TEIL                       ----------->GT1            <---------YAB1              -          <---------ARR14(2)            <---------HSFB2a(2)            --------->ARR11(3)        <---          --------->ARR14(2)            --------->HSFB2a(2)            --------->AHL20(1) <----------TaMYB80  ---------->DOF2           <----------DOF2  --------->HSFB2a(1)       <---------ARR11(3)<---------ARR11(3) --WOX13(1)      <---------GLK1(1)      <---------HSFC1(1)             <---------AHL20(1)--------->ARR11(3) ------DEAR3(1)  --------->GLK1(1)<---------GLK1(2)          --------->TOE2(3)          --------->YAB1 -----NtERF2<---------LBD16<---------DAG2    <---------HSFB2a(1)--------->MYB52(1) ------>ZmHOX2a(1)-   ctgcgaaagacgaatcgggaattctttcgcctttcagtttctctagaaggtttcaatttgttttcttaacgaatatttttgtttcctatatgatattccg  17852800                                                      <---------MYB46(3)                                                     <---------O2                                                     <---------TGA1a                                                    <------NtERF2                                                    --------->ATERF1(1)                                                   <---------ATERF1(1)                                                  ----------->HVH21                                                  <---------DEAR3(1)     <---------At4g35610               <---------ANAC46----------->GT1     --------->At4g35610             <---------ANAC46--------->TGA1a ---------ANAC55(2)                  <---------ANAC58<---------ANAC46 -------->ANAC58                     <---------ANAC58--------->O2         <-------TEIL           <--- ------MYB52(1)---------->ID1     <---------AtMYB61------>NtERF2<------ZmHOX2a(1)        <---------LBD16 -------->ANAC58             <---------TOE2(3)    --------->ETT(2)     ----------->GT1  <---------ANAC46   ataagtaagctgtttttgttctaatgaaattaagttttggtgtgtatatagggcgacgggtgaaaaggatgtgaggttcaaagtcttgttctgtggaatt  17852900  Previous    Next  AGI:  At4g37970.1    Description:  mannitol dehydrogenase, putative. similar to ELI3-2 (ELICITOR-ACTIVATED GENE 3) [Arabidopsis thaliana] (TAIR:AT4G37990.1); similar to sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides] (GB:AAW45741.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-containing, conserved site; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alco Range:  from: 17849642    to: 17852240    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g37980.1    Description:  ELI3-1 (ELICITOR-ACTIVATED GENE 3); binding / catalytic/ oxidoreductase/ zinc ion binding. Identical to Probable mannitol dehydrogenase 1 (ELI3-1) [Arabidopsis Thaliana] (GB:Q02971;GB:Q9SZJ9); similar to ELI3-2 (ELICITOR-ACTIVATED GENE 3) [Arabidopsis thaliana] (TAIR:AT4G37990.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96585.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-containing, conserved site; (InterP Range:  from: 17852435    to: 17854494    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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