Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                            ---------                                                                                            ------>NtERF2                                                                                           --------->ATERF1(2)                                                                                           <---------DEAR3(1)                                                                                           <---------ATERF1(2)                                                                                          <------NtERF2                                                                                          --------->ATERF1(1)                                                                                         <---------DEAR4(2)                                                                                         <---------RAP2.3(1)                                                                                         <---------ATERF1(1)                                                                                         <---------ORA47(2)                                                                                        <---------RAP2.3(2)                --------->GLK1(2)                                                       <---------RAP2.3(3)       --------->TOE2(2)                                                             ----------->HVH21       --------->TOE1(2)                                                         ------>ZmHOX2a(1)      <---------ANAC58                                               ----------->HVH21  <---------DEAR3(1)      <---------ANAC55(2)                                          ----------->RAV1(2) --------->ATERF1(1)      <---------ANAC46                                         <---------ARR14(2)<---------HSFB2a(2)      <---------ANAC55(1)                 <------ZmHOX2a(1)    ------->TEIL      <---------LBD16      <---------ANAC58               <---------AHL20(2)   --------->At4g35610 ------>ZmHOX2a(1) -----      --------->ANAC55(2)           --------->YAB1        <---------At4g35610<---------ALFIN1<------NtERF2    --------->MYB52(1)        ----------->GT1 ----------->HVH21--------->ARR14(2)--------->HSFB2a(2) -------->DOF2<---------KAN4(1)    <---------YAB1<---------WOX13(1)--------->At4g35610<---------ATERF1(1)   caaaagtaacgtatgaataatctgtatatgtgaagttattataaggacctgatagattgaagctgaatcttctgacgctcctcctcggagacggcggcaa  17806100                 <--------P                 <---------WOX13(1)          <----------DOF2         <---------ANAC46        <------NtERF2       <---------RRTF1(1)       <---------ERF1       <---------DEAR4(2)       <---------ATERF1(1)       <---------RAP2.3(1)       <---------ORA47(2)       ------>NtERF2      <---------RAP2.3(2)      --------->DEAR3(1)      <---------RAP2.3(3)      <---------ANAC46      <---------DEAR3(1)     --------->ATERF1(1)     --------->RAP2.3(1)     <---------ABI4(1)     <------NtERF2    <---------ATERF1(1)    <---------RAP2.3(1)            --------->At4g35610    <---------DEAR4(2)          <------MYB46(1)   <---------RAP2.3(2)     --------->ALFIN1   <---------DEAR3(1)      <---------AtMYB61                                                 <-------   --------->DEAR3(1)    --------->ALFIN1                                                <-----------HVH21  <---------At4g35610 ==================HOX2a_HOX2a                                     <xxxxxxxxxxxx  --------->At4g35610 ------>ZmHOX2a(2)  <---------HSFB2a(1)   <---------At4g35610    <---------At5g28300 -->RAV1(1)     <-------GAMYB <--------P --------->HSFB2a(1)  ------->TEIL  <---------MYB46(3) >RAP2.6(2)    <---------MYB46(3)<------ZmHOX2a(1)--------->HSFB2a(2)     <-------GAMYB --------->DEAR3(1) ----->DOF2   <---------AtMYB61 <------MYB83      <---------HSFB2a(2)    <---------MYB46(3) <--------   aagcagcggcggcgttttggttgatcggtgtggtaggagcagaacgtttcttctgtaacgaatgaagctcatcgatggttgtggcattcaccgtcggacc  17806200                                              <---------ARR11(3)                                            --------->DOF5.7(2)                                            <---------MYB52(1)                                  --------->At4g35610                                  <---------At4g35610                              <-----------RAV1(1)                    <---------ALFIN1      --------->MYB52(2)                   <---------MYB52(1)     <---------MYB46(3)       <---------MYB52(1)                  <---------At4g35610   <---------MYB52(1)        ------>ZmHOX2a(1)             -----                  --------->At4g35610<---------LBD16              <----------DOF2             <------     <---------O2--------->ANAC46 <---------ZAT2              <---------MYB52(1)        ----------->HVH21 --PCF5         --------->ZAT18   --------->ZAT2         <---------ALFIN1              <-----------HVH21 xxxxxxxxsmallRNA(si3)      <----------DOF2<-------GAMYB----------->HVH21              <-----------TGA1 -SPL7      <---------ATERF1(1)<---------At4g35610     <-----------HVH21              --------->ANAC46   actatcgtcgtggcagactccgctacctctctttgctgctccggtcgttatcttcggcatcaccggtcctttagggaaactaaaccctccgtcaccgtta  17806300                  <---------RAP2.6(3)                  ------>NtERF2                  <---------DDF1                 --------->RAP2.6(2)                 ----------->HVH21                 <---------ETT(2)                 --------->DREB2C(2)                 --------->At1g77200                --------->DEAR3(2)                --------->SPL7             --------->MYB46(3)             <---------ATERF1(2)             --------->ATERF1(2)           <---------DOF5.7(2)           --------->MYB52(1)         <---------MYB52(1)         --------->DOF5.7(2)        <-----------HVH21        <-------GAMYB      ----------------->AGL1      <-----------------AGL1    --------->ARR14(2)               --------->TOE2(3)    <---------ARR14(2)               ------->GAMYB                                              <----   --------->GLK1(1)    <----------DOF2 ----------->RAV1(1)                                 <--------   <---------GLK1(1) <---------ARR11(3)--------->ANAC46                                    --------->AHL20(2) ---->MYB52(2)<---------SPL7        --------->MYB46(3)                                     <---------AHL20(2) ---MYB52(1)--------->DEAR3(2) ------>ZmHOX2a(1)  ---------->DOF2                   <---------ZAT6<--   gtagcatttccgttaccggccgacatctttttcctgtaaccacaacacaaaaaaaagacagagttacgaagttgattacactcgtactgatattaaaatt  17806400                                                                                                 <---                                                                                   ==============HOX2a_HOX2a                                 <---------ARR11(3)                                <------ZmHOX2a(1)                         ================HOX2a_HOX2a                       -------->HAHB4        <---                   <---------LBD16<------ZmHOX2a(2)                        --------->ATHB12     <----     ----------->GT1 --------->LBD16 --------->ANAC58                     <---------YAB1 <---------ARR11(3) -------GT1       <---------At5g28300--------->ANAC58                     --------->ICU4 --------->ARR11(3) -YAB1--------->TOE2(3)  <------ZmHOX2a(1)                                <---------ATHB12<------ZmHOX2a(2) -------YAB1     <-----------GT1 --------->ARR11(3)            ---------->DOF2------>ZmHOX2a(2) <----   accatcgacgttaaaaattttaccggaggaagagagatcacgaacaagaagaggctgagaaagattaaagagactaatgatcggaggagaagatcattta  17806500                                                                       <---------HSFB2a(2)                                                                  <---------GLK1(2)    <---------ICU4                                                                  --------->ARR11(3)   --------->YAB1                                                                  <---------ARR11(3)   -------->HAHB4         >>>>>>>>>NAM                                      <---------TOE2(3)          --------->ICU4 ------TOE1(3)                                           ---------->DOF2              <---------ATHB51 ------TOE2(3)                                        <-----------TBP  --------->HSFB2a(2)  ------->TEIL -----DOF5.7(2)                                  ----------->GT1----------->ARR10  >>>>>>>>>GT-1 -------GT1                      *TSS       ---------->DOF2<---------TOE1(3)    ----------->GT1   acgttttcaagggatgatacaaaatgatgcgaatgtgaagagaagcgaaagtggttttttaaaggttagatttttagaaccatggttaataatgaaccgt  17806600                               <---------TOE1(2)                              ------>ZmHOX2a(1)                              --------->HSFB2a(2)                              <---------HSFB2a(2)                                        <---------ICU4                             --------->TOE1(2)                                          --------->ICU4                     ===================HOX2a_HOX2a                              <---------ANAC46                     ================HOX2a_HOX2a      <---------AHL20(2)       ----------->GT1                     ------>ZmHOX2a(2)               <---------YAB1            <---------MYB46(3)                    ====================HOX2a_HOX2a <---------AHL20(2)         --------->MYB55(2)                    <------ZmHOX2a(2)          <---------AHL20(2)             <---------AtMYB61                    =================HOX2a_HOX2a<---------AHL20(2)      --------->MYB52(1)                   --------->AGP1          <----------DOF2              <---------ARR14(2)                   <---------AGP1<------ZmHOX2a(1)<---------YAB1        --------->ARR14(2)                   <---------ARR11(3)      <---------DAG2            --------->YAB1   ---------->DOF2  <---------ZAT6   --------->ARR11(3)     <---------DAG2  <-----------GT1    <---------MYB52(1)   gagagtgttaaccatggttaagatctatcttcctaggaagagccccttttttatttttattttctctcttaacataaccggtggtttataaagatgacta  17806700                    <---------ALFIN1                 --------->ANAC46                 --------->PCF2             <---------WOX13(1)           --------->YAB1          <---------YAB1                                                       <---------ANAC58        --------->YAB1                                                    <---------ICU4        <---------ICU4                                          <---------AHL20(2)        -------->HAHB4                                      <---------CCA1(1)  <---------ANAC58       --------->ICU4                 --------->ARR11(3)   <---------AHL20(1)  <---------ANAC46       <---------ATHB51               <---------ARR11(3)   --------->ARR11(3)  --------->ANAC55(2)    <---------AHL20(2)  --------->ANAC58                   --------->AHL20(1)  <---------ANAC55(2)    --------->AHL20(2)  --------->ANAC58                   <---------ARR11(3)  <---------ANAC55(1)   --------->AHL20(2)   --------->ANAC46     ----------->GT1<---------RVE1(1)<-----------GT1   taccatttaattatgatagaccccacacgaaaatgtgtaagataattttgtaaatttgtaagatattatatgtgaatttttacgtgttttttttgtttga  17806800                              ----------->GT1                       --------->GLK1(1)                              <------MYB83                          <---------GLK1(1)                       --------->ANAC46                     <---------AHL20(2) <---------TOE2(3)                  --------->ZAT6                          <---------------AGL15--------->DAG2                -------->P    <------MYB46(1)            <-----------------AGL3<---------TOE1(3)             --------->At4g35610                     <---------At4g35610   --------->YAB1   <--------             <---------At4g35610   --------->YAB1    --------->At4g35610 <---------TOE2(3)  <--------   aaaactctatagctcggctacctctacgtagttggtataatggtatgtataattcagcttatttttttggaaatcaaggataaggtttgacttccttttt  17806900                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                       <---------AHL20(2)                                                      --------->AHL20(2)                                                ----------->GT1                      <---------AHL20(1)       --------->ALFIN1                                  <---                      --------->ARR11(3)     --------->ALFIN1                              ------>MYB46(1)                      <---------ARR11(3)     ==========================bZIP_DOF      <----------ID1                 --------->AHL20(2)          <---------TGA1a                ----------->GT1------>MYB83    <---------ZAT6    --------->AHL20(1)   --------->At4g35610             ------->MYC3    -------->P -DAG2  <---------AHL20(2)                 <---------At4g35610 ---------->DOF2     --------->ANAC46 --DOF2--------->AHL20(2) <-------TEIL   <-----------RAV1(2)<----------DOF2<-------MYC3 --------->MYB46(3)   caactagtattaaatcgaattaaaaatattcatctaaaatagttcagatgtgggaaataaatctttaaagaaatcaacgtgttataagcgaccaacttgc  17807000  Previous    Next  AGI:  At4g37870.1    Description:  PCK1/PEPCK (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1); ATP binding / phosphoenolpyruvate carboxykinase (ATP). Identical to Phosphoenolpyruvate carboxykinase [ATP] [Arabidopsis Thaliana] (GB:Q9T074); similar to PCK2/PEPCK (PHOSPHOENOLPYRUVATE CARBOXYKINASE 2), ATP binding / phosphoenolpyruvate carboxykinase (ATP) [Arabidopsis thaliana] (TAIR:AT5G65690.1); similar to phosphoenolpyruvate carboxykinase [Flaveria trinervia] (GB:BAB43908.1); similar to phosphoenolpyruvate carboxykinase [Flaveria pringlei] (GB:BAB43909.1); similar to phosphoenolpyruvate carboxykinase [Flaveria trinervia] (GB:BAB43907.1); contains InterPro domain Phosphoenolpyruvate carb Range:  from: 17802688    to: 17806533    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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