Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <---------ANAC46                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                            --------->ARR11(3)                                                                        <---------AHL20(2)                                                                       <---------AHL20(2)                    --------->ATHB12                                   --------->AHL20(2)                   <---------YAB1             <----------DOF2          --------->AHL20(1)           - ---->YAB1       <---------At4g35610<------ZmHOX2a(1)                  <---------AHL20(1)    --------   ataaacccaaattttgggcatatgatttgagttggacaggatgtgattctttttttttttgtttctctaacaatataatgtcttgggttattttgtggtg  17743500                                                                                            ---------                                                                                            <--------                                                                                    <-----------GT1                                                                                 --------->YAB1                                                                                --------->AHL20(2)            <-------TEIL                                                        <---------AHL20(2)    <---------REM1(1)      --------->ZAT18                              --------->WOX13(1) --------->AHL20(2) <-----------RAV1(1)<---------YAB1                                    <---------ATHB12     <---------AHL20(2) -------->ARR11(3) --------->TOE2(3)  --------->YAB1                --------->WOX13(1)   --------->TOE2(3) --->GT1 ----------->GT1   <---------ZAT18             <---------ARR11(3)      --------->AHL20(2)   aatatgttgtagggttcaaaacattatagtccacatgaaatcatatttttgggccttgatattttcatatcaatcaatcgaattaataacacattaattg  17743600                                                                          --------->ANAC58                                                     --------->ANAC58     --------->ANAC58                                                     --------->ANAC46 --------->ANAC58              -                                                     --------->ANAC58 --------->ANAC46            <-- >ATHB12                                             --------->AtLEC2 --------->ANAC58       -------- -ICU4             <---------MYB46(3)               <---------LBD16  <---------LBD16         <-------   catcgaaaatgtggtttttgtttgttataccaaaatacgaaggcaaaactcttccacgcaaaaaactcttccacgcatgcctctaacttcatccagttct  17743700      --------->YAB1     <---------YAB1                     --------->GLK1(1)  <---------MYB52(1)          --------->ARR11(3) <-------GAMYB                --------->GLK1(2)                  ---------->DOF2 -------->MYB52(2)            <---------ARR11(3)               <---------YAB1       <-----------GT1 -------MYB52(1)        <-----------GT1--------->ARR11(3)  <---------DAG2          ---------->ID1 ->ARR14(2)        --------->AHL20(2)  <---------ARR11(3)  <----------DOF2    <----------DOF2       < --ARR14(2)      --------->AHL20(2) --------->YAB1   --------->YAB1        <-----------GT1      <----   gttcgttatgataaaaaaaaaaaatataacaaaatctataagatttctaatttgatcagaactttataaaagtctaataacttttgtcacattataagct  17743800                              <------------CBF                            <---------AHL20(2)                            --------->AHL20(2)                           --------->AHL20(2)                      --------->TOE2(3)                      <---------MYB59                    ------>MYB46(1)                                     <---------ANAC46                  <---------MYB59                                       <---------ANAC58                  --------->MYB46(3)                                    ----------------->AGL1                  ------->GAMYB                                         <---------ANAC58                  --------->DREB2C(2)                                   <---------ANAC55(2)                  --------->DEAR3(1)             --------->HSFB2a(2)    --------->ANAC55(2) ---------  <------ZmHOX2a(1) ------>MYB83          ------>ZmHOX2a(1)       --------->ARR11(3)   --------->ANAC46 ---------TOE2(3)--------->DEAR3(2)      <---------MYB59          <---------ARR11(3)   --------->ANAC58 ------DOF2   --------->MYB46(3)   <------------CBF       --------->AHL20(2)     *TSS  --------->ANAC58   tttaggaaaaaataaaacgaccgaccttatttaattgcattgtcctaacttcccaaacgttttaatgagattttgcgtaatagagaaacaagccacgagt  17743900                                                                       <-----------HVH21                                                                      --------->ANAC46                                                                     ------->MYC3                                                                     <-------MYC3                  --                                            ====================HOX2a_HOX2a                        <-                                          <---------ARR11(3)        --------->O2                  ---                                --------->AHL20(2)                  --------->ANAC58        <--------                --------->GLK1(2)---------->DOF2                    --------->ANAC46    ------>MYB83-               --------->YAB1 ------>MYB46(1)<----------DOF2        --------->ANAC58    ------>MYB46(1)         --------->RAP2.6(2)  ------>MYB83--------->ARR11(3)   <---------ARR14(2)      --------->MYB52(1)         ----------->RAV1(1)<---------------AGL15              --------->ARR14(2)     --------->AtMYB61      --------->ANAC46      <---------MYB59 ------>ZmHOX2a(2) <---------CCA1(2)      --------->MYB46(3) >O2<---------At5g28300     --------------->AGL15        ------>ZmHOX2a(1)    ----------->GT1     <--   tcgattcacagccacaataatctttctctaccaaataaagacttgatctttctcttctccttctatatccacgcgtcaattcgtaaaaccaacggcttga  17744000                         --------->ALFIN1                         <---------DEAR3(1)                         <---------ANAC46                        <---------At4g35610                        <------NtERF2                        ------>NtERF2                        --------->ATERF1(1)                        <---------LBD16                       <---------RRTF1(1)              <------NtERF2             --------->LBD16             ------>NtERF2 <------NtERF2             <---------LBD16   --------->LBD16     <---------RAP2.3(1)              <---------GLK1(1)   --------->ANAC46   <---------RAP2.6(2)          --------->At4g35610           <------NtERF2  --------->DEAR3(1)  <---------RAP2.3(2)        --------->DEAR3(1)   --------->ANAC46  <---------ATERF1(2) <---------ANAC58           <---------ALFIN1     --------->ANAC58         ------  --------->DREB2C(2) <---------RRTF1(3)         --------->AtMYB61   --------->SPL7------>NtERF2  --------->ATERF1(2) <---------RRTF1(2)        --------->MYB46(3)   --------->ZAT18   <---------ARR14(2) <---------LBD16      <---------RAP2.3(3)     --------->ANAC46       <---------ZAT18   <---------ARR11(3) ------->AtMYB61      <---------DEAR3(1)    --------->ANAC58       <---------ZAT14--------->DEAR3(1) --------ALFIN1--------->LBD16    --------->WOX13(1)    --------->GLK1(1)        --------->ATERF1(1) ------>MYB46(3)      <---------ANAC46      --------->ANAC46       --------->ZAT14----------->HVH21 -ANAC46    --------->DEAR3(1)<------ZmHOX2a(1)------->TEIL        <---------SPL7--------->DEAR3(2) -------->MYB52(1)    <---------ANAC58      --------->ANAC58       --------->REM1(2)   --------->ARR14(2) -------MYB55(2)     <---------LBD16 --------->YAB1----------->RAV1(2)--------->ANAC58 --------->ARR11(3)   accaccggcaatagccgcgggattgcggcggaggattaatcaaaaaacgcaccacctgaaatctctctgtgtacgctaatggctccgacgatattcgttg  17744100                                                                      <------NtERF2                                                                     --------->LBD16                                                                    --------->DEAR3(1)                                                                   <------NtERF2                                                                   <---------LBD16                                                                   --------->ATERF1(1)                                                                  <---------ATERF1(1)                                                                  ------>NtERF2                                                                 <---------DEAR3(1)                                                                --------->ATERF1(1)          --------->ANAC46                                     <---------ATERF1(1)         ------>ZmHOX2a(1)                    <---------At4g35610--------->DEAR3(1)     --------->ARR14(2)                <---------ANAC58        <-----------HVH21     <---------ARR14(2) ---------->ID1 <---------ANAC58       <---------ANAC58     ------->TEIL     --------->MYB52(2)  <---------ARR14(2)  <---------ANAC58    <---------CCA1(2) <---------MYB46(3)<----------DOF2--------->ANAC46            --------->ATHB12 --->WRKY38(1)        <-----------RAV1(1) --------->ARR14(2)------>ZmHOX2a(1)     <-------TEIL   atcactgtatcctcacaacaacgtttgtcgcatccttgttcgcgtttctgcttctatacgtcctgcgtcgccggagcaagacgattcatgggtctgtcaa  17744200                                                                          --------->ATERF1(1)                                                                          <------NtERF2                                                                       <------NtERF2                                                                       --------->RAP2.3(1)                                                                       --------->ATERF1(1)                                                                      <---------DEAR4(2)                                                                      --------->LBD16                                                                      <---------ERF1                                                                      ------>NtERF2                                                                      <---------RAP2.3(1)                                                                     <---------ATERF1(2)                                                                     <---------RAP2.3(2)                                                                     <---------DEAR3(1)                                                                     --------->ATERF1(2)                                                                     --------->DEAR3(1)                                                                    <------NtERF2                                                                    <---------LBD16                                                                    --------->RAP2.3(1)                                                                    --------->ATERF1(1)                                                                   <---------RAP2.3(1)                                                                   <---------ATERF1(1)                                                                   ------>NtERF2                                                                  <---------DEAR3(1)                                                                  --------->ETT(2)                                                                 <------NtERF2                                                           <---------ANAC58                                                          <---------ZAT2 <---------DEAR4(2)                   --------->At5g28300                    --------->ABI4(2) ------>NtERF2               --------->MYB52(1)                        --------->ALFIN1--------->At4g35610              ----------->HVH21                        <---------DEAR3(2)--------->ABI4(2)            --------->TOE1(3)                         <---------DEAR3(1) ------>NtERF2         --------->ARR14(2)                           --------->ETT(1)<---------ORA47(2)         <---------ARR14(2)                           <---------At1g77200<---------ATERF1(1)       ------->GAMYB                                  <---------DEAR4(1)<---------DEAR3(1)      --------->ANAC58          --------->MYB46(3)    <---------DREB2C(2)<---------At4g35610      --------->ANAC55(2)       --------->DEAR3(2)  <-----------HVH21<---------RAP2.3(3)      --------->ANAC58     --------->HSFB2a(2)     <-----------RAV1(1)<---------ATERF1(1)      <---------ANAC55(2)  <---------HSFB2a(2)  --------->YAB1   --------->ATERF1(1)    --------->MYB52(1)    <---------LBD16       <---------ICU4 <-----------RAV1(1)                 --   ----------->HVH21   --------->GLK1(1)        --------->ATHB12<-----------HVH21                 --- --------->ANAC46 ----------->GT1              <---------YAB1  <---------REM1(1)                  --- --------->ANAC55(2)   <---------GLK1(1)     --------->YAB1<---------ANAC58--------->DEAR3(1)  <-----   tgtccgtaacggaaccctaacggtgaaatctggaacagacgttgatattatcattgtcggtgctggtgtcgccggcgctgcccttgctcataccctcggc  17744300       ------>ZmHOX2a(2)      <---------RVE1(1)      <------ZmHOX2a(2)     --------->ARR14(3)     <-----------ARR10     --------->ARR14(2)     <---------ARR14(3)                                                                            <-     <---------ARR14(2)                                                               ---------------     <---------ARR11(3)                             <---------DAG2                    <--------------     --------->AGP1                     --------->ANAC55(2)                          <---------------     --------->ARR11(3)               <-----------GT1                     <---------AHL20(2)<--------   ----------->ARR10              <----------DOF2   <----------DOF2  <---------MYB52(1)     --------- --------->GT1                    <---------DAG2 <-----------GT1  ---------->ID1     ---------------- ------>ANAC58                 <-----------GT1<---------ICU4<---------ANAC58         <--------------- ------>ANAC58                <-----------GT1--------->ICU4 <---------ANAC58         <--------------- -NtERF2<----------DOF2    ----------------------->TaNAC69(2)<----------DOF2    <-----------GT1    --   aaggtaagatcttttcttcttaattcaaagttttaactttttacataattttgactttttttgcttttgtcgttattcaatttcacttctatttctggta  17744400  Previous    Next  AGI:  At4g37760.1    Description:  SQE3 (SQUALENE EPOXIDASE 3); oxidoreductase. similar to XF1 (SQUALENE EPOXIDASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G58440.1); similar to SQE2 (SQUALENE EPOXIDASE 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G22830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24799.1); similar to squalene epoxidase [Euphorbia tirucalli] (GB:BAF79915.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49806.1); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain Squalene epoxidase (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPr Range:  from: 17743881    to: 17746672    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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