Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ANAC58                                                              --------->ANAC58           --------->YAB1                                    --------->DAG2               <---------ANAC58           <-----------GT1  <---------AtMYB61               ---------->DOF2               <---------AtLEC2        --------->YAB1   <----------DOF2               --------->ANAC58                   <---------ANAC58 --------->GLK1(2) <-----------GT1              ---------->DOF2                           <---------ANAC46 ------At4g35610  <-----------GT1      <---------ANAC58--------->ANAC58                  --------->ATHB12 -----TOE1(3)    <---------AHL20(2)    <---------ANAC58--------->AtLEC2        ---------->DOF2-------   gctaatctttttataacaatttatcttcttttggtctgttttcttgtttataaagtcatgcaaaaagcaaattagcgaaataaaagtctattgcttggcc  17695100                                                                                               ------                                                                                               ------                               <------MYB46(1)             --------->ZAT14                  ---------                               <------MYB83   --------->ANAC46    <---------At4g35610       <--------                               <---------ANAC58     <---------WRKY18(1)                  --------->YAB1      <----------DOF2          <---------ANAC58    --------->WRKY38(1)              --------->ARR14(2)      --------------->AGL15   --------->MYB59 --------->ANAC58    --------->At4g35610   <-------TEIL      <---------------AGL15   <---------MYB46(3)   ----------->HVH21       --------->AHL20(2) <------ --->ID1          --------->YAB1<---------PCF2--------->ANAC58--------->ANAC46      <---------ARR14(2)   caattttgctttaactagaatcaaaaccttgttgggtccccttgtaccacgacttgaccattacactcatctaactataaaatgcctatattcataatca  17695200                                                <---------YAB1                                              --------->YAB1                                          --------->AHL20(2)                                          <---------AHL20(2)                                         --------->AHL20(2)                                      --------->AHL20(2)                                      <---------AHL20(2)                                     <---------AHL20(1)                             <---------TOE1(3)<---------ICU4                             <---------TOE2(3)-------->HAHB4 --->YAB1          ------>ZmHOX2a(1) --------->AHL20(1) --->ATHB12       --------->TOE2(2)  --------->AHL20(2) >YAB1            --------->TOE1(2)  <---------AHL20(2) -ICU4      <---------AHL20(2)----------->GT1<---------ATHB51                              <--------- ---YAB1   --------->YAB1    --------->MYB59 --------->ICU4----------->GT1     --------->At4g35610  <   tagggaatgtctatattaatcctatgaagtttaggttaatttatttaattatgagttcaaacagaaaaacttgatttcattagcttaagtagtctttatg  17695300                                                                           <---------ANAC58                                                                           <---------ANAC46                                                                           <---------ANAC58                                                                           <------MYB83                                                                           <------MYB46(1)                                                                          <------MYB46(1)                                                      <-----------GT1     <------MYB83                                                  <---------DAG2        <--------P                                         <---------AHL20(2)            <---------ANAC58                                       --------->AHL20(2)              <---------ANAC58                                     --------->AHL20(2)                <-------GAMYB                                >>>>>>>>>MYB98    <----------DOF2     <------MYB83                              <-----------GT1  <---------AHL20(2)     <------MYB46(1)                         <---------AHL20(2)    <-----------GT1        <---------MYB46(3) <-------TEIL                        <---------AHL20(2) <---------AHL20(2)        --------->MYB59  <---------ANAC58  ---------->DOF2       <---------AHL20(1)<---------AHL20(1)         <---------AtMYB61<---------ANAC58 -DOF2                  --------->AHL20(2)--------->AHL20(1) <----------DOF2          <---------ANAC46 ---------HSFB2a(2) <---------AHL20(2) <---------AHL20(2)    ------>ZmHOX2a(1)  --------->ATHB12   ttcccaaagaaaaaacaaatattcaattttttttaacatatatatatatttacttttttcatccttttagtttggttgggtttgatttgggtgcatacta  17695400                                                                                               <-----                                                                                             <-------                                                                   --------->ANAC46         ---------                                                                   --------->LBD16          <--------                                                            --------->DAG2                 --------->MYB52(1)                                                      --------->ANAC58                    -----------                           <---------PCF2             --------->ANAC58                    <---------SPL7                        --------->ALFIN1    --------->AHL20(2)    <---------ATERF1(2)     *TSS-------                      <-----------RAV1(1)   <---------AHL20(2)   <---------LBD16         --------->MYB46(3)                      <---------ANAC46      <---------AHL20(1)  --------->MYB52(1)       --------->DEAR3(2)                --------->ICU4       <---------At4g35610   ---------->DOF2         <------------CBF       <---------MYB52(1) ----------->TCP11(1)   ----------->HVH21--------->ATERF1(2)<XXXXXXXXXXXXXXX   gttgttttcgttatgggccttattatgtgggccttagacagcccattttatttgacgagcaaaaagtaccggcaaaatgaaatgaaattgaacggacggc  17695500                                                       --------->HSFB2a(1)                     ------                                                       <---------HSFB2a(1)                    -------                                                   --------->LBD16                           <------NtERF2                                                  --------->ANAC46                           --------                                                  <---------HSFB2a(2)                       ------>NtERF2                                              --------->GLK1(1)    ------>ZmHOX2a(2)        <--------                                              <------ZmHOX2a(2)   <---------GLK1(1)        --------->DEAR3(1)                                       <---------At4g35610  --------->HSFB2a(2)            --------->ANAC46                                       --------->ZAT2  --------->HSFC1(2)               ----------->HVH21                                       <---------ZAT2  <---------HSFC1(2)        ------------------>SPL14   --------->TOE2(3)                <---------ANAC58  <---------KAN4(2)   <---------MYB52(1)<--------   --------->TOE1(3)                <---------ANAC58 <---------GLK1(2)   <-------GAMYB  --------->ANAC46 -NtERF2                       <---------ARR14(2) --------->HSFB2a(2)    <-----------HVH21 <---------DEAR3(1) --DEAR3(1)                    --------->ARR14(2)<---------LBD16  <------ZmHOX2a(2)    --------->SPL7 >SPL7                    --------->LBD16     <---------GLK1(1)   --------->GLK1(1)   <---------SPL1(1) -ORA47(1)               --------->DEAR3(1)  <---------ARR14(2)  <---------ARR14(3)   --------->SPL1(1) >HVH21>>>>>>>>>MYB98   <---------LBD16--------->At4g35610  <---------HSFB2a(2)  <---------ALFIN1 --- ---->GT1              <---------At5g28300   --------->ARR14(2)  --------->ARR11(3)  <---------SPL7 XXXXXMIR858   --------->TOE2(3)---------->DOF2------>ZmHOX2a(2) <---------ARR11(3)--------->ANAC46   gaaaaccctaacaaaaacctccattcaccggcgaaaatgcgagctccgatctccggaattttctcgagatctctcggttacctccaccgtacgacgccgc  17695600                           <------NtERF2                          <---------ATERF1(1)                          ------>NtERF2                          <-----------HVH21                         --------->DEAR3(1)                         --------->RAP2.3(3)                         --------->RAP2.3(2)                         <---------DEAR3(1)                         <---------O2                         --------->O2    <---------ZAT2                        --------->RRTF1(1)                        --------->ATERF1(1)      <---------MYB52(1)<------NtERF2--------->LBD16     --------->LBD16    --------->DEAR4(2)                              <---------------------WRI1     <---------At4g35610--------->ERF1   --------->ZAT2                 <------NtERF2    --------->ANAC46    --------->ORA47(2)                             ------>NtERF2  ------>ZmHOX2a(1)     --------->RAP2.3(1)                           --------->At1g77200 >NtERF2    <-----------HVH21       --------->HSFB2a(2)               --------->DEAR3(1) -->RAP2.6(2)          <---------RAP2.3(1)                            ----------->HVH21 ->RAP2.3(1)<-----------TGA1        <---------HSFB2a(2)              --------->RAP2.3(1) -ATERF1(1)--------->ANAC46<---------MYB52(1)                    <---------ARR14(2) -RAP2.3(1)--------->bZIP60(2)     <---------LBD16               --------->ARR14(2) ------>ARR14(2)      --------->ANAC46--------->LBD16   --------------------->WRI1   tatcctccgctactcgtcacctatgcgccgtcgcttctcccgaagctcgaacgaagaaactcgagcgaatcgccgacgatttactcaaactgaatcggat  17695700                                                                                          <----------                                                                                          <----------                                                                                         --------->TGA1a                                                                                         --------->O2                                                                                       <---------O2                                                                                       --------->O2                                                                                      <------NtERF2                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2                                                                                    --------->DEAR3(1)                                                                                    ----------->HVH21                                                                                   <------NtERF2                                                                                   --------->RAP2.3(1)                                                                                  <---------ATERF1(1)                                                                                  <---------RAP2.3(1)                                                                                  <---------ERF1                                                                                 --------->ETT(1)                                                                                 <---------At1g77200                                                                                 <---------RAP2.3(3)                                                                                 <---------DEAR3(1)                                                                                 <---------DEAR4(1)                                                                                 <---------DREB2C(2)                                                                               <-----------HVH21                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           <-----------ARR10                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                           <---------AGP1============                                                                           <---------ARR11(1)                                                                           <---------ARR11(3)                                                                      --------->MYB52(1) --------->bZIP60(2)                                                                   <-----------HVH21<---------DEAR3(1)                                                                <---------At4g35610--------->ATERF1(1)                                                                <---------ZAT2----------->HVH21                                                            --------->DEAR3(1)<-----------RAV1(1)   <                                                          --------->LBD16  --------->GLK1(2)  <------                                                          ------>NtERF2<---------LBD16--------->ATERF1(1)      <---------YAB1                                   <---------ATERF1(1)<---------CCA1(2)   <------  <----------DOF2              --------->AHL20(2)     <---------ARR14(2)  <---------ARR14(1)  -------  <---------DAG2    ------>ZmHOX2a(1)                 --------->ARR14(2) --------->LBD16------>NtERF2   tgagctttacgattactcactcctcttcagccataaaataggtctcaatcgctacggttccgccgtagctgttaccggatctgtcggcgacgcgtcagct  17695800                  <------NtERF2                                                                     - --------->ANAC46--------->LBD16                                                                    - -TGA1 --------->ANAC58                                                                             - -HVH21--------->ANAC58                                                                             - =======================================bZIP_DOF                                        <------ZmHOX2a(2) ---------LBD16 <---------DEAR3(1)        <---------ANAC58                            <---------GLK1(1) ---At4g35610   <---------ANAC46          <---------ANAC58              ---------->DOF2-------------- ---ZAT2   --------->MYB52(1)<----------DOF2              <---------RAP2.6(2)    ---------->DOF2    - -->At4g35610  <---------LBD16       ----------->HVH21   <---------At4g35610----------->GT1        <-   tctacggagacgaaaacggcggagaagactactttcgatgtgaagcttgagaaattcgaagcggcttcgaagattaaagtgataaaagagatcagagcat  17695900     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   --------->GLK1(2)   <---------ARR14(2)   --------->ARR14(2)   ------->TEIL   <---------AGP1   --------->ARR11(3)                   --------->ANAC58  <---------CCA1(2)                     --------->ANAC58                                  <------ZmHOX2a(2) -------->ANAC55(1)                   ---------->DOF2                                    --------->ARR11(3) -------->ANAC58                <-------GAMYB                                            <---------ARR11(3) -------->ANAC58               <---------MYB46(3)                               --------->ZAT2 -------->ANAC55(2)         <----------DOF2                                     <---------At4g35610 --------->TaNAC69(2)   <---------TOE1(3)        --------->ATHB12               --------->At4g35610 -------->ANAC46        <---------TOE2(3)  ----------->RAV1(1)                 --------->GLK1(2) --------LBD16---------->DOF2 <---------AtMYB61 <---------ATHB12       ---------->DOF2 ----------->ARR10   tcacggatctgggattgaaagaagctaaggctttggttgagaaagccccagtgattgtgaagaatggtcttactaaagaagaagctgagaagatcatgga  17696000  Previous    Next  AGI:  At4g37660.1    Description:  ribosomal protein L12 family protein. similar to ribosomal protein L12 family protein [Arabidopsis thaliana] (TAIR:AT1G70190.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83934.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17672.1); contains InterPro domain Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719); contains InterPro domain Ribosomal protein L7/L12, C-terminal; (InterPro:IPR013823); contains InterPro domain Ribosomal protein L12, chloroplast (InterPro:IPR015608) Range:  from: 17695490    to: 17696264    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version