Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ----------->GT1                      <---------RVE1(1)                                      --------->MYB52(1)                     <---------GLK1(2)              --------->ANAC55(2)      ----------->RAV1(1)                     --------->ARR11(3)             --------->ANAC46 ------>NtERF2                     <---------ARR11(3)           <---------YAB1     --------->LBD16 --------->MYB46(3)                 ---------->DOF2      --------->ALFIN1           --------->ANAC46--------->At5g28300       <---------AHL20(2)             ----------->GT1<---------MYB59--------->DEAR3(1)            ---   aagagctattttttttatctaaagatttttagttagagaggtgttaatagttatacttaactaataaacgccgagaaaacaacagtaacaactcaattaa  17656200                                                --------->ANAC58                                                ----------->GT1                                       ---------->DOF2                                      <---------AHL20(2)                                    --------->CCA1(2)                                            <---            ----------->GT1        <---------ARR11(3)                                            ----          ---------->DOF2          --------->ARR11(3)                                           -----     ----------->GT1           ---------->DOF2  --------->ANAC58                            <-------- ------->DOF2       <-------TEIL<---------TOE2(3)          ---------->DOF2   --------->AtLEC2--------   caaagactcgttaaaagtaaaatacgtttatattaaagatttaaagtgataggcaaaatgaaaaagaaaatggctaaccatgctcatcgtttatattatt  17656300         ------>ZmHOX2a(2)        --------->GLK1(1)        <------ZmHOX2a(2)       <---------ARR14(2)       --------->ARR14(2)       <---------ARR11(1)       <---------ARR11(3)              <---------MYB46(3)       <-----------ARR10       <---------YAB1       --------->ARR11(3)    --------->AHL20(2)      <---------CCA1(2)      <---------AHL20(2)      <---------ARR14(1)    --------->AHL20(2)                    <----------DOF2   <---------LBD16          --------->AHL20(1)             <----------DOF2 ------AHL20(2)             <---------AHL20(1)       --------->GLK1(1) ----->AHL20(2)         --------->AHL20(2)           <---------GLK1(1) ---->AHL20(2)          <---------AHL20(2)          --------->ARR11(3) -AHL20(2)  --------->ATHB12<---------AHL20(2)      <---------ARR11(3)  <----------DOF2 ->AHL20(2)<---------YAB1<---------AHL20(2)     ---------->DOF2<-----------GT1                    <--   taattttcggatcttcattaggcttataaatttatttttagttgttaacaaaaagatttctctttatactttagcttttgtaatcttgtttggccaaact  17656400                   <---------AHL20(2)                   --------->ATHB12                --------------->AGL15                <---------------AGL15         <---------AHL20(1)         --------->AHL20(1)       <---------ARR11(3)                 <---------AHL20(2)     <---------YAB1       --------->ARR11(3)            <---------YAB1            --------->YAB1       <---------AHL20(1)          --------->YAB1              <---------ICU4                 XXXXXXX --------DOF2<-----------GT1<---------At4g35610       <---------MYB52(2)           --------->ANAC55(2)   ctttttgaatatatattacatttattggtgagcacattgattattttatgtagccaactaaaccatcatcactatattggtgtctacgtactgtctactt  17656500                                                                  <---------YAB1                                                                -------->HAHB4                                                                --------->YAB1                                                               <---------YAB1                                                               --------->ICU4                                                             <---------ICU4                                                             --------->YAB1                                                            <---------ATHB12                                                            <---------ATHB51                                                            --------->ICU4                            --------->CCA1(2)        --------->WOX13(1)                    --------->ZAT6   <---------ZAT6          <---------ARR11(3)      *TSS<---------ATHB12               --------->WOX13(1)  <-----------------AGL2   --------->ARR11(3)      ------------>CBF                 ------------>CBF XXXXXXXXXXXXX>MIR868    <---------TOE2(3)  <-------TEIL--------->AHL20(2)          --------->MYB46(3)   aagtactgttaatggaccacgatttttaagatataaacttacaaaatacatgtttcaatcaaataatgataatcgttgatagttcaaccaattacactaa  17656600                                               <---------ANAC46                                     <---------WOX13(1)                        <---------ARR14(2)  ----------->HVH21                        --------->ARR14(2)  <---------ATHB12                       ------>MYB46(1)  ------------>CBF                       ------>MYB83 <---------ANAC58                 --------->ZAT18    <---------ANAC58                 <---------ZAT18   --------->ATHB12                --------->ALFIN1  <---------AHL20(2)                                   ---------->DOF2             --------->DAG2       <---------YAB1<---------LBD16                     --------->AHL20(2)            ---------->DOF2 ------>ZmHOX2a(1)  <---------bZIP60(2)         <---------At4g35610         <------ZmHOX2a(1)  --------->LBD16 ----------->TGA1  <---------ZAT6    --------->LBD16  --------->TOE2(3)  <---------MYB59<------------CBF        ----------->GT1--------->At4g35610   aaaacattagaggagaaagtggaccaaatcctgaatttgattgccaatgacgggggaaaacatagtgaaaatgtttaagctccgaattaaaaagaacata  17656700                               <-------TEIL                            <---------ANAC58                            <---------ANAC58                        <----------DOF2                 <-----------GT1    --------->TOE2(3)          <XXXXXXXXXXXXXXXXXXXXMIR417                                                   --------->AHL20(2)  <---------MYB52(1) --------->ARR11(3)                              <---------YAB1 ----------->GT1 <   gaccgtcgtttgaattggtttactatctttacgttcaatcttatatcgatttgttttggtataatttcattttgataaatccaaaatggtttaaatcaga  17656800                <---------MYB111(1)                    <---------AHL20(2)    --------->YAB1             ------>ZmHOX2a(1)                         <---------YAB1 ----------->GT1            <---------MYB59                           <---------AHL20(2)    <---------AHL20(2)      <---------TOE2(2)                        <---------ICU4         <---------ANAC46           ----      <---------TOE1(2)           --------->GLK1(2)   --------->AHL20(2)    <---------YAB1     ------     ------>ZmHOX2a(1)        --------->YAB1 <---------YAB1     <---------YAB1     --------->ZAT18 ---------CCA1(2)          --------->YAB1 --------->AHL20(2)  <---------At4g35610  <---------ZAT18<--   ttgtatcctatgttcctaactactagttagaataataatctatttttaatattgattttaattcttctgatggagtatataatagtgctcgacaatgtca  17656900                           --------->TOE1(3)                           --------->TOE2(3)                          ----------->RAV1(2)                         ------>MYB46(1)                         ============================================MYC_MYB                         =================================================MYC_MYB                         ------>MYB83                         -------->P                                --------->ZAT18                        --------->MYB55(1)                        --------->ALFIN1                       --------->AtMYB61                        <---------O2                       <---------MYB111(2)                  <-----------HVH21                       <---------MYB59                     <---------O2                       <---------MYB46(2)                  --------->O2                       <---------MYB111(1)                 --------->TGA1a                      --------->MYB46(3)                   --------->ANAC46                     ------>MYB83                          --------->bZIP60(2)                     ------>MYB46(1)                       --------->ANAC58                     ================================================MYC_MYB                     -------->P                            --------->ANAC58                    --------->MYB55(1)                     <---------TGA1a                   <---------MYB111(1)                   <---------ALFIN1                   <---------MYB55(2)                   --------->ATERF1(1)                   --------->MYB46(3)                  ------>NtERF2   <---------ANAC58                   <---------MYB46(2)                 <---------PCF2   <---------ANAC58 <---------ICU4    <---------MYB111(2)                <---------PCF5   ----------->GT1 --------------->AtSPL8--------->MYB46(3)             <---------TCP16(1) <---------MYB52(1) <-------- --------->YAB1 <-----------GT1                       --------->PCF2   <---------ANAC46    >>>>>>>>>ARR1 ----->ICU4 <---------AHL20(2)              <---------AHL20(2)  --------->TGA1a           --------->ATHB12 --->YAB1  --------->AHL20(2)              --------->AHL20(1)   --------->O2 <---------YAB1>>>>>>>>>ARR2 -------ICU4--------->AHL20(2)             <---------AHL20(1)   <---------TGA1a          <---------YAB1   taatcagtacaaaataaatcacctaccaacctgaactatatgttatatattttgaggggccacgtcaagtgtgccgtttatttttgtgtttatgattgtt  17657000                       <---------ANAC58                                                         -----                       <---------ANAC58                                                         <----               <---------AtMYB61                                   ==================================        <---------ANAC58              --------->ANAC46  --------->ARR11(3) --------->YAB1--------->HSFB2a(2)        <---------ANAC46   <---------ANAC58        --------->AHL20(2)     <---------YAB1 <---------HSFC1(1)        <---------ANAC58   <---------ANAC58  --------->ANAC46 --------->ALFIN1           --------->HSFC1(1) -WOX13(1)  ----------->HVH21    <-----------GT1  <<<<<<<<<ARR2    <-----------------AGL3<---------HSFB2a(2)   taatatttgtgcgtgtgatggtgtttcttgcttagtttccacttaatacacaatcaaatatcaagtggaactatttatgaaaattgttcttcgagaagaa  17657100  Previous    Next  AGI:  At4g37570.1    Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52410.1); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Protein of unknown function DUF321; (InterPro:IPR005529) Range:  from: 17655167    to: 17656551    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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